BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141110.2 - phase: 0
(262 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77710 weakly similar to GP|13377782|gb|AAK20860.1 fasciclin-li... 516 e-147
TC86688 similar to GP|21553523|gb|AAM62616.1 arabinogalactan pro... 141 3e-34
TC79849 similar to GP|16648847|gb|AAL25613.1 AT5g44130/MLN1_5 {A... 132 1e-31
TC88972 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalac... 116 8e-27
TC79404 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalac... 107 4e-24
TC86975 weakly similar to GP|8570054|dbj|BAA96759.1 EST D25138(R... 105 2e-23
TC88190 weakly similar to GP|21553523|gb|AAM62616.1 arabinogalac... 103 9e-23
TC77641 similar to GP|21595125|gb|AAM66074.1 endosperm-specific ... 102 1e-22
TC85732 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalac... 102 1e-22
TC79247 weakly similar to GP|15294288|gb|AAK95321.1 AT5g60490/mu... 99 1e-21
TC77608 weakly similar to GP|15294288|gb|AAK95321.1 AT5g60490/mu... 99 2e-21
BE320198 weakly similar to GP|18461298|dbj putative arabinogalac... 94 5e-20
TC89693 weakly similar to GP|21104633|dbj|BAB93225. hypothetical... 85 2e-17
TC92264 similar to GP|5919185|gb|AAD56235.1| arabinogalactan pro... 82 2e-16
TC88952 weakly similar to GP|21554036|gb|AAM63117.1 unknown {Ara... 76 1e-14
TC86976 similar to GP|18461298|dbj|BAB84493. putative arabinogal... 73 1e-13
TC85131 similar to GP|13377776|gb|AAK20857.1 fasciclin-like arab... 55 4e-08
TC85731 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalac... 50 7e-07
BQ750934 similar to PIR|T19673|T19 hypothetical protein C33B4.3 ... 40 0.001
TC80872 similar to GP|22597168|gb|AAN03471.1 unknown protein {Gl... 39 0.002
>TC77710 weakly similar to GP|13377782|gb|AAK20860.1 fasciclin-like
arabinogalactan-protein 7 {Arabidopsis thaliana},
partial (71%)
Length = 1128
Score = 516 bits (1328), Expect = e-147
Identities = 262/262 (100%), Positives = 262/262 (100%)
Frame = +2
Query: 1 MKVSMIFLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFH 60
MKVSMIFLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFH
Sbjct: 74 MKVSMIFLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFH 253
Query: 61 TFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHA 120
TFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHA
Sbjct: 254 TFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHA 433
Query: 121 LPHFYSLADFKNLSQTASTPTFAGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVA 180
LPHFYSLADFKNLSQTASTPTFAGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVA
Sbjct: 434 LPHFYSLADFKNLSQTASTPTFAGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVA 613
Query: 181 IYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDRSSSYK 240
IYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDRSSSYK
Sbjct: 614 IYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDRSSSYK 793
Query: 241 IVSYGIWGNLVLATFGLVVVIL 262
IVSYGIWGNLVLATFGLVVVIL
Sbjct: 794 IVSYGIWGNLVLATFGLVVVIL 859
>TC86688 similar to GP|21553523|gb|AAM62616.1 arabinogalactan protein-like
{Arabidopsis thaliana}, partial (66%)
Length = 986
Score = 141 bits (355), Expect = 3e-34
Identities = 89/235 (37%), Positives = 138/235 (57%), Gaps = 7/235 (2%)
Frame = +2
Query: 33 SPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGITIFVPK 92
S PA +PAP+ +N+T++L AG F TF++ L++T+V D +Q NN+ +G+TIF P
Sbjct: 125 SAQPAISPAPSGP-LNITKVLEKAGQFTTFIKLLKATQVSDRINSQLNNSNQGLTIFAPT 301
Query: 93 DSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTP--TFAG----GD 146
D++F+SLK +L+ + Q++ FH LP Y+++ F QTAS P T AG G+
Sbjct: 302 DNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQF----QTASNPLHTQAGNSDDGE 469
Query: 147 YTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAP 206
Y LN T + V + +G T V++ +++ + +A+YQVD+VLLP A+FG P APA
Sbjct: 470 YPLNVTTSGNQVNVTTGVIDTTVSNTIYSDNQLAVYQVDQVLLPMALFGQG--PTAAPAE 643
Query: 207 TPEIAPAADSPTEQSADSKSSSPSSSPDRSSSYKIVSYGIWG-NLVLATFGLVVV 260
P AP + +++D+ S S D SS+ + Y + G L +A F VVV
Sbjct: 644 AP--APTKPEKSVRASDAPKGSSDSPADDSSAVGLNGYIVNGATLFVAVFANVVV 802
>TC79849 similar to GP|16648847|gb|AAL25613.1 AT5g44130/MLN1_5 {Arabidopsis
thaliana}, partial (50%)
Length = 814
Score = 132 bits (332), Expect = 1e-31
Identities = 76/234 (32%), Positives = 129/234 (54%), Gaps = 2/234 (0%)
Frame = +3
Query: 28 SPPAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGIT 87
+P ++ PAPAP+ +N+T + AG ++ ++ L T+ L Q Q N+T EG T
Sbjct: 117 TPQIQAQAPAPAPSGP---INITTIFEKAGQYNFLIRLLNETQQLTQIQTQLNSTSEGFT 287
Query: 88 IFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFA-GGD 146
IF P D++F +L +++ L D + Q+IL+H P +YSL+DF +S T G+
Sbjct: 288 IFAPTDNAFQNLPSGAINDLSDQQKVQLILYHVTPKYYSLSDFLTVSNPVRTQASGKEGN 467
Query: 147 YTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAP 206
+ L+FT V +++G + +A+ P+A+YQ+DKVLLP +FG P +PAP
Sbjct: 468 WGLHFTSQGNQVNVSTGVVTVPINNALRQQFPLAVYQLDKVLLPSELFGAK-SPSSSPAP 644
Query: 207 TPEIAPAADSPTEQSADSKSSSPSSS-PDRSSSYKIVSYGIWGNLVLATFGLVV 259
P + +P+ + + SP+SS D S++ + V +G L L +G+++
Sbjct: 645 KSSKTP-SKTPSSSDVEGDAPSPASSKKDDSAAGRNVGFGFVAGLGLI*WGVLL 803
>TC88972 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
Pop14A9 {Populus x canescens}, partial (64%)
Length = 1009
Score = 116 bits (291), Expect = 8e-27
Identities = 81/221 (36%), Positives = 117/221 (52%), Gaps = 3/221 (1%)
Frame = +2
Query: 7 FLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYL 66
FL TLLL+ + T++ SP +P P+ APT ++ +L AG F T ++ L
Sbjct: 47 FLSFTLLLIVFFSSTTTLAQKSP---APAPSTDTAPT----DIIRILKKAGGFTTLIRLL 205
Query: 67 QSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYS 126
Q+T+V +Q N+ G+T+F P D+SF+SLK L+ L D++ ++I FH LP F S
Sbjct: 206 QTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVS 385
Query: 127 LADFKNLSQTASTPTFAGGD---YTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQ 183
+++F LS T AG D LN T + V + +G V V+ +A+YQ
Sbjct: 386 MSNFDTLSNPVRTQ--AGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQ 559
Query: 184 VDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADS 224
VDKVLLP F P APAP PE S ++S+DS
Sbjct: 560 VDKVLLPRDFFVAKPP---APAPAPE---KTKSSKKKSSDS 664
>TC79404 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
Pop14A9 {Populus x canescens}, partial (23%)
Length = 1104
Score = 107 bits (268), Expect = 4e-24
Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 24/283 (8%)
Frame = +3
Query: 2 KVSMIFLVSTLLLLSSS---AFAKTVSPPSPPAESPTP-APAPAP---------TPDFVN 48
+V+ F S LL SS+ + A SP SP PTP A AP+P +PD +
Sbjct: 87 QVTFFFFFSLFLLFSSTLSISQAPESSPKSPKKTPPTPKATAPSPKSLVPTLPESPDSTD 266
Query: 49 -----LTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEG-ITIFVPKDSSFASLKKP 102
+T +L A F ++ L++T+++ + +Q + G +TI P DS+F+SLK
Sbjct: 267 SVPDDITTILKKAKTFSVLIRLLKTTEIMSSVNSQLITAKNGGLTILAPDDSAFSSLKAG 446
Query: 103 SLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAGGDYT---LNFTDNSGTVK 159
L+ L +++ +++ FH LP + + ++F +LS T AG D T LN + V
Sbjct: 447 FLNSLDENKKIELLQFHILPQYVASSNFDSLSNPVQ--TIAGKDPTRLPLNVYASGNNVS 620
Query: 160 INSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTE 219
+++G V V+ + +AIY +DKVLLP F T APA P +A AA +P
Sbjct: 621 LSTGVVTASVVGVVYTDNKLAIYHLDKVLLPRDFFATK-----APALAPTLAAAAKAPKA 785
Query: 220 QSADSKSS--SPSSSPDRSSSYKIVSYGIWGNLVLATFGLVVV 260
+ ++ S+ + D+ S + GI G +++ + ++
Sbjct: 786 ANKENSSADDQDQNDQDQGKSGAVRLCGILGTTLMSFVAVAMI 914
>TC86975 weakly similar to GP|8570054|dbj|BAA96759.1 EST D25138(R3286)
corresponds to a region of the predicted gene.~Similar
to Pinus taeda, partial (32%)
Length = 1110
Score = 105 bits (261), Expect = 2e-23
Identities = 83/266 (31%), Positives = 133/266 (49%), Gaps = 21/266 (7%)
Frame = +1
Query: 3 VSMIFLVSTLLLLSSSAFAK---TVSPPSPPAESPTPAPAPAP------TPDF---VNLT 50
VS+++ +T L S A A T+ P+ PA +P P P TPD V++
Sbjct: 79 VSLLYSTTTSLSQLSPATAPIQPTLPAPTTPAAAPKPLVPSLPESPSDSTPDTAGTVDIV 258
Query: 51 ELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEG-ITIFVPKDSSFASLKKPSLSKLKD 109
+L A ++ F++ +++T++++ +Q T+ G +TI P DS+F+ LK L+ L D
Sbjct: 259 GILRKAKAYNVFIRLMKTTQLINQLNSQLLATKTGGLTILAPDDSAFSGLKAGFLNSLSD 438
Query: 110 DEIKQVILFHALPHFYSLADFKNLSQTASTPTFAG---GDYTLNFTDNSGTVKINSGWSI 166
+ +++ FH + + S ++F L T T AG G LN G+V I++G
Sbjct: 439 GQKLELLQFHVISDYVSSSNFDTL--TNPVRTLAGDKPGKVELNVVSYGGSVNISTGEVN 612
Query: 167 TKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKS 226
T + ++ +AIY+V KVLLP F P AP+ PE P+ D+ D +
Sbjct: 613 TTINGIIYTDKRLAIYKVGKVLLPMDFFSVAKAPGKAPSLAPE--PSTDTAKAPKPDKDT 786
Query: 227 SSPSS-----SPDRSSSYKIVSYGIW 247
SS SS + ++S S KIV YG W
Sbjct: 787 SSDSSQVINPTVNKSGSIKIV-YGKW 861
>TC88190 weakly similar to GP|21553523|gb|AAM62616.1 arabinogalactan
protein-like {Arabidopsis thaliana}, partial (29%)
Length = 1249
Score = 103 bits (256), Expect = 9e-23
Identities = 78/277 (28%), Positives = 137/277 (49%), Gaps = 19/277 (6%)
Frame = +2
Query: 4 SMIFLVSTLLLLSSSAFAKTVSPPSPPAESP-TPAPAPAPTPDFV--------------- 47
+++ L + + +SSA + +P + +P TPAPA AP V
Sbjct: 164 TLLVLFAQIFFTTSSAQSPAAAPKAAAKPAPATPAPATAPAKPLVPSLPQPPSSDSSSGQ 343
Query: 48 NLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEG-ITIFVPKDSSFASLKKPSLSK 106
++ ++L A F+T ++ L++T++++ +Q T+ G +TI P D +F+ LK +
Sbjct: 344 DIIKILRKAKSFNTLIRLLKTTQIINQINSQLVTTKNGGLTILAPDDGAFSQLKAGYFNS 523
Query: 107 LKDDEIKQVILFHALPHFYSLADFKNLSQTAST-PTFAGGDYTLNFTDNSGTVKINSGWS 165
L + + K++I FH LP + S ++F +LS T + + Y +N T V I++G
Sbjct: 524 LGEHQQKELIQFHVLPVYVSSSNFDSLSNPVLTLASDSPSGYHMNVTAYGNNVNISTGPV 703
Query: 166 ITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSK 225
+T V++ +AIY VDKVL+P P LAPAP+ AP AD + S+
Sbjct: 704 NATLTGIVYSDKTLAIYHVDKVLIP---LDFSKPKALAPAPSTAKAPKAD---KDSSSED 865
Query: 226 SSSPSSSPDRSSSYKIVSYGIWGNLVLATF-GLVVVI 261
++ S + ++S+ G + ++ F GLV I
Sbjct: 866 GDQGETTKATSGANNLISH--QGTMFVSLFVGLVAAI 970
>TC77641 similar to GP|21595125|gb|AAM66074.1 endosperm-specific
protein-like protein {Arabidopsis thaliana}, partial
(82%)
Length = 1488
Score = 102 bits (255), Expect = 1e-22
Identities = 73/251 (29%), Positives = 118/251 (46%), Gaps = 21/251 (8%)
Frame = +2
Query: 30 PAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGITIF 89
P +P AP P+ VNLT L+ AG TF + S ++ TFQ+ A ++G+TIF
Sbjct: 521 PIIAPGILTAPPPSSS-VNLTALIEKAG-CKTFASLISSNGLIKTFQSTA---DKGLTIF 685
Query: 90 VPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTAST-PTFAGGDYT 148
P D +F + P L+KL + E+ ++ +HA + + K S+ T G +
Sbjct: 686 APNDEAFKAKGVPDLTKLSNAELVSLLQYHAAAKYLPIGSLKTTKDPISSLATNGAGKFD 865
Query: 149 LNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVL----AP 204
T +V +++G +++ ++ + P+AIY VD VLLP +F T P AP
Sbjct: 866 YTVTTAGDSVTLHTGVDSSRIADSILDSTPLAIYSVDSVLLPSELFATSPSPAPEPAGAP 1045
Query: 205 APTPEI----------------APAADSPTEQSADSKSSSPSSSPDRSSSYKIVSYGIWG 248
+PTP APA +SP AD+ S++ S +S+ + + G++
Sbjct: 1046SPTPASAPSPADAPTPLPASPPAPAGESPDGAPADAPSTAAEKSTGKSAGVNVKATGVFT 1225
Query: 249 NLVLATFGLVV 259
V A VV
Sbjct: 1226VAVTALSAFVV 1258
Score = 35.8 bits (81), Expect = 0.017
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 13 LLLSSSAFAKTVSPPSPPAESPTPAPAPAPTP 44
+LL S FA + SP PA +P+P PA AP+P
Sbjct: 980 VLLPSELFATSPSPAPEPAGAPSPTPASAPSP 1075
Score = 33.5 bits (75), Expect = 0.085
Identities = 18/43 (41%), Positives = 22/43 (50%), Gaps = 1/43 (2%)
Frame = +2
Query: 3 VSMIFLVSTLLLLSSSAFAKTVSPPSP-PAESPTPAPAPAPTP 44
V + L S L S S + PSP PA +P+PA AP P P
Sbjct: 971 VDSVLLPSELFATSPSPAPEPAGAPSPTPASAPSPADAPTPLP 1099
Score = 29.3 bits (64), Expect = 1.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 25 SPPSPPAESPTPAPAPAPT 43
SPP+P ESP APA AP+
Sbjct: 1103 SPPAPAGESPDGAPADAPS 1159
Score = 27.3 bits (59), Expect = 6.1
Identities = 14/32 (43%), Positives = 19/32 (58%), Gaps = 1/32 (3%)
Frame = +3
Query: 15 LSSSAFAKTVSPP-SPPAESPTPAPAPAPTPD 45
LS S+ + + SPP SPP SP +P TP+
Sbjct: 36 LSPSSSSSSPSPPQSPPTTSPKSSPPTLTTPN 131
>TC85732 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
Pop14A9 {Populus x canescens}, partial (23%)
Length = 1035
Score = 102 bits (254), Expect = 1e-22
Identities = 83/278 (29%), Positives = 137/278 (48%), Gaps = 29/278 (10%)
Frame = +3
Query: 5 MIFLVSTLLLLSSSAFAKTVSPPSP---PAESPTPAPAPAP------------------- 42
+IF S LL+ SS ++ ++ + PA++ +P APAP
Sbjct: 60 IIFSFSLFLLMFSSLYSPNIAATATATAPAQAASPKHAPAPKAASPTSTKPLVPTLPDTS 239
Query: 43 --TPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEG-ITIFVPKDSSFASL 99
TPD ++T++L A F + L++T+++D +Q + + G +TI P DS+F+ L
Sbjct: 240 DSTPD--DITKILKKAKTFTILTRLLRTTQIVDNLNSQLISAKSGGLTILAPDDSAFSHL 413
Query: 100 KKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAGGD---YTLNFTDNSG 156
K + L +++ +++ FH LP F +F +LS T AG D LN
Sbjct: 414 KAGFFNSLNENKKIELLQFHILPQFVDSNNFDSLSNPVE--TVAGKDPLKLPLNIESFGT 587
Query: 157 TVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPE-IAPAAD 215
+V +++G VT V+ + +AIY++DKVLLP FGT P A AP E IAP AD
Sbjct: 588 SVSLSTGVVNASVTGVVYQDNKLAIYRLDKVLLPLDFFGTKAP---AAAPVAEAIAPKAD 758
Query: 216 SPTEQSADSKSSSPSSSPDRSSSYKIVSYGIWGNLVLA 253
T+ S++ ++ +SS ++ GI G ++
Sbjct: 759 K-TKSSSEEDEDDTTTQDKKSSGANLL--GIQGTAYIS 863
>TC79247 weakly similar to GP|15294288|gb|AAK95321.1 AT5g60490/muf9_140
{Arabidopsis thaliana}, partial (47%)
Length = 864
Score = 99.4 bits (246), Expect = 1e-21
Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 35/246 (14%)
Frame = +2
Query: 4 SMIFLVSTLLLLSSSAFAKTVSPPSPP-----AESPTPA-------------------PA 39
++ F ST L S + T S PSPP A +P PA PA
Sbjct: 122 AITFYTSTTLAQLSPIQSPTTSSPSPPLPSTTASTPLPATTATAPSPGLSTVPLVPTTPA 301
Query: 40 PAPTPDF-------VNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEG---ITIF 89
AP+P +++ +L A F ++ L++T++++ +Q ++ G +TIF
Sbjct: 302 GAPSPTITVPKGPTIDIINILQKAKRFSVLIRLLKTTQLINQLNSQLVSSPSGSGGLTIF 481
Query: 90 VPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAGGDYTL 149
P+DS+F+ LK L+ L D + +++ FH+L F S+++F L+ T L
Sbjct: 482 APEDSAFSKLKAGFLNSLTDRQKVELLQFHSLASFVSISNFDTLTNPVQTQAGDDARLQL 661
Query: 150 NFTDNSGT-VKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTP 208
N T G+ V + +G VT V+ +AIYQVDKVL+P + P LAPAP
Sbjct: 662 NVTTYGGSQVSMATGAVNATVTGTVYTDSKLAIYQVDKVLMPLDLVLPAKAPALAPAPAK 841
Query: 209 EIAPAA 214
+ P A
Sbjct: 842 GLLPKA 859
>TC77608 weakly similar to GP|15294288|gb|AAK95321.1 AT5g60490/muf9_140
{Arabidopsis thaliana}, partial (24%)
Length = 1163
Score = 98.6 bits (244), Expect = 2e-21
Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Frame = +1
Query: 3 VSMIFLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPA-----------PTPDFVNLTE 51
V +F +TL LS A + SPP+ P SPT P PTP ++ +
Sbjct: 109 VISLFCSNTLAALSP-ATSPIQSPPTQPISSPTKPLVPTFPPNDNTTPETPTPT-TDIVQ 282
Query: 52 LLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEG-ITIFVPKDSSFASLKKPSLSKLKDD 110
+L A F+ FL+ +++T++++ +Q + G +TI P DS+F+ LK L+ L ++
Sbjct: 283 ILKQANSFNIFLRLMKTTQLINQLNSQLLTIKSGGLTILAPDDSAFSELKPGFLNSLSNE 462
Query: 111 EIKQVILFHALPHFYSLADFKNLSQTASTPTFAG---GDYTLNFTDNSGTVKINSGWSIT 167
+ +++ FH + F S ++F L T T AG G LN G V I++G T
Sbjct: 463 KKLELLQFHVISDFVSSSNFDTL--TNPVRTLAGNKPGKVELNVISYGGNVNISTGSVNT 636
Query: 168 KVTSAVHATDPVAIYQVDKVLLPEAIFGTD--IPPVLAPAPTPEIAPA-ADSPTEQSADS 224
+ ++ +AIY+V KVL+P + V A AP P IA A A +P ++ S
Sbjct: 637 TINGIIYTDKHLAIYKVGKVLIPSEFSPAKKIVAEVPALAPAPAIADAKAPTPEKEKPSS 816
Query: 225 KSSSPSSS---PDRSSSYKIVSYGIWGNLVL 252
S +S SS+ +I G W LV+
Sbjct: 817 SEDSTTSQVVPAVTSSAMRIDMCGSWVALVV 909
>BE320198 weakly similar to GP|18461298|dbj putative arabinogalactan-like
protein {Oryza sativa (japonica cultivar-group)},
partial (26%)
Length = 441
Score = 94.0 bits (232), Expect = 5e-20
Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Frame = +1
Query: 66 LQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFY 125
LQ+T+V Q N+ G+T+F P D+SF++LK L+ L D + ++I FH LP F
Sbjct: 1 LQTTQVATQINAQLLNSNNGLTLFAPNDNSFSTLKPGFLNSLNDQQKNELIQFHELPSFV 180
Query: 126 SLADFKNLSQTASTPTFAGGD---YTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIY 182
+L++F LS T AG D LN T + V + +G V +V + +AIY
Sbjct: 181 ALSNFDTLSNPVRTQ--AGDDPERLALNITSSGTQVNLTTGVVNATVGGSVFSDHQLAIY 354
Query: 183 QVDKVLLPEAIFGTDIPPVLAPAPTPE 209
QVDKVLLP F PP PAP PE
Sbjct: 355 QVDKVLLPRDFFIPKSPP---PAPAPE 426
>TC89693 weakly similar to GP|21104633|dbj|BAB93225. hypothetical
protein~similar to Arabidopsis thaliana chromosome 3
At3g46550, partial (53%)
Length = 1346
Score = 85.1 bits (209), Expect = 2e-17
Identities = 58/171 (33%), Positives = 86/171 (49%), Gaps = 5/171 (2%)
Frame = +1
Query: 47 VNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPS-LS 105
+N+T+ L A F+ L ++ V + F+ A GIT+F+P D +FA L L
Sbjct: 613 LNITKTLIDAHNFNVAASMLSASSVANEFE--AGEGGSGITLFIPVDDAFADLPPSG*LQ 786
Query: 106 KLKDDEIKQVILFHALPHFYSLADFKN----LSQTASTPTFAGGDYTLNFTDNSGTVKIN 161
L D+ V+ H L +Y L ++ L T +T G +TLN + +G+V IN
Sbjct: 787 SLPADQKAAVLKAHVLRAYYPLGSLQSTANPLQPTLATEAMGAGSFTLNISTFNGSVAIN 966
Query: 162 SGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAP 212
+G +T V +P+AI+ V KVLLP IFG + P V A +P AP
Sbjct: 967 TGIVQAIITQTVFDQNPIAIFGVSKVLLPREIFGKN-PIVSAKSPPESSAP 1116
>TC92264 similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
Pop14A9 {Populus x canescens}, partial (22%)
Length = 1190
Score = 82.4 bits (202), Expect = 2e-16
Identities = 78/304 (25%), Positives = 138/304 (44%), Gaps = 44/304 (14%)
Frame = +1
Query: 1 MKVSMIFLVSTLLLLSSSAFAKT-----VSP-PSPPAESPTPA----------PAPAPTP 44
MK+ +F S L LL + + T +SP SP A +P P P+ APTP
Sbjct: 91 MKLRSLFFASILQLLILTLYYSTTTSAQISPVQSPQASTPAPGFNTVPLVPVTPSGAPTP 270
Query: 45 DF------VNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQ------ANNTEEGITIFVPK 92
+ +++ ++L A F ++ L++T++++ +Q ++++ G+T+F P+
Sbjct: 271 NILPKSPSIDIIQILKKAKRFSVLIRLLKTTQLINQLNSQLVTSSSSDSSSGGLTLFAPE 450
Query: 93 DSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAGGDYTLNFT 152
D++F+ LK L+ L D + + +PH + + +L+ +TP G T
Sbjct: 451 DNAFSKLKPGFLNSLSDKTQSRTV---TIPHTFLI----HLNLELATPLTNPGSNTSR** 609
Query: 153 DNSGT-----------VKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPV 201
T V + +G VT V+ + +AIYQVDKVL+P + + P
Sbjct: 610 RQKATTLM*PLSGGSHVSMTTGTVNATVTGTVYTDNKLAIYQVDKVLVPLDL----VLPA 777
Query: 202 LAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDRSSSYKIVSYG-----IWGNLVLATFG 256
APAP P + P ++ SKSSS D ++ + G + G + FG
Sbjct: 778 KAPAPAPVSKGDSAKPDDR---SKSSSAKDDDDENNDLPAEASGAGYSNVDGMWLALVFG 948
Query: 257 LVVV 260
+V++
Sbjct: 949 MVLL 960
>TC88952 weakly similar to GP|21554036|gb|AAM63117.1 unknown {Arabidopsis
thaliana}, partial (17%)
Length = 738
Score = 75.9 bits (185), Expect = 1e-14
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 33/207 (15%)
Frame = +1
Query: 2 KVSMIFLVSTLLL--------LSSSAFAKTVSPPSPPAESPTPA------PAPAPTPDFV 47
K++ IFL S LLL L+ S A +P P P PA PAPAP V
Sbjct: 82 KMNQIFLFSLLLLASIFSSTTLAQSPAAAPKAPEKPAPTKPAPAKPTPSTPAPAPAKPLV 261
Query: 48 -----------------NLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEE-GITIF 89
++ ++L A F+T ++ L++T++++ Q T+ G+TI
Sbjct: 262 PALPQSPTTNPDASGNQDIIKILRKAKSFNTLIRLLKTTQIINQVNAQLVTTKNGGLTIL 441
Query: 90 VPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTAST-PTFAGGDYT 148
P D +F+ LK + L + + K++I +H LP + S ++F +LS T + + +
Sbjct: 442 APDDGAFSELKAGYFNSLGERQQKELIQYHVLPEYVSSSNFDSLSNPVLTLASDSPQGFQ 621
Query: 149 LNFTDNSGTVKINSGWSITKVTSAVHA 175
+N T +V I++G T +T V+A
Sbjct: 622 INVTAYGNSVNISTGVVDTTITGIVYA 702
>TC86976 similar to GP|18461298|dbj|BAB84493. putative arabinogalactan-like
protein {Oryza sativa (japonica cultivar-group)},
partial (6%)
Length = 684
Score = 72.8 bits (177), Expect = 1e-13
Identities = 56/188 (29%), Positives = 93/188 (48%), Gaps = 16/188 (8%)
Frame = +1
Query: 3 VSMIFLVSTLLLLSSSAFAK---TVSPPSPPAESPTPAPAPAP------TPDF---VNLT 50
VS++F +T L S A A T+ P+ PA +P P P TPD V++
Sbjct: 112 VSLLFSTTTTLSQLSPATAPIQPTLPAPTTPAAAPKPLVPSLPESPSDSTPDTAGTVDIV 291
Query: 51 ELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEG-ITIFVPKDSSFASLKKPSLSKLKD 109
+L A F+ F++ +++T++++ +Q T+ G +TI P DS+F+ LK L+ L D
Sbjct: 292 GILRKAKAFNVFIRLMKTTQLINQLNSQLLATKTGGLTILAPDDSAFSRLKARFLNSLSD 471
Query: 110 DEIKQVILFHALPHFYSLADFKNLSQTASTPTFAG---GDYTLNFTDNSGTVKINSGWSI 166
+ +++ FH + + S ++F L T T AG G LN G V I++G
Sbjct: 472 GQKLELLQFHVISDYVSNSNFDTL--TNPVKTLAGDKPGKVELNVVSYGGNVNISTGEGN 645
Query: 167 TKVTSAVH 174
T + V+
Sbjct: 646 TTINGIVY 669
>TC85131 similar to GP|13377776|gb|AAK20857.1 fasciclin-like
arabinogalactan-protein 1 {Arabidopsis thaliana},
partial (61%)
Length = 888
Score = 54.7 bits (130), Expect = 4e-08
Identities = 48/185 (25%), Positives = 83/185 (43%), Gaps = 3/185 (1%)
Frame = +1
Query: 27 PSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGI 86
PS AE+PTPAP+ NLT +++ G F + L + + F + + G+
Sbjct: 382 PSAAAEAPTPAPSQQ------NLTVIMSKHG-CKIFAETLSTFH--EAFNTFTDAIDGGL 534
Query: 87 TIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKN---LSQTASTPTFA 143
++F P D +F + P L ++ FH +P + S+ K+ L T +T +
Sbjct: 535 SVFCPADDAFKAFL-PKFKNLTMSGKIDLLEFHGVPIYNSIPMLKSNNGLMHTLATEGAS 711
Query: 144 GGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLA 203
D+T+ T+K K+ + P+AIY + K LLP+ + + A
Sbjct: 712 NYDFTVQNDGEEITLKTKR--VTAKIIDTIIDEQPLAIYTISKGLLPQELLKGE-----A 870
Query: 204 PAPTP 208
P+P+P
Sbjct: 871 PSPSP 885
>TC85731 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
Pop14A9 {Populus x canescens}, partial (23%)
Length = 684
Score = 50.4 bits (119), Expect = 7e-07
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Frame = -3
Query: 141 TFAGGD---YTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTD 197
T AG D LN +V +++G VT V+ + +AIY++DKVLLP FGT
Sbjct: 547 TVAGKDPLKLPLNIESFGTSVSLSTGVVNASVTGVVYQDNKLAIYRLDKVLLPLDFFGTK 368
Query: 198 IPPVLAPAPTPE-IAPAADSPTEQSADSKSSSPSSSPDRSSSYKIVSYGIWGNLVLA 253
P A AP E IAP AD T+ S++ ++ +SS ++ GI G ++
Sbjct: 367 AP---AAAPVAEAIAPKADK-TKSSSEEDEDDTTTQDKKSSGANLL--GIQGTAYIS 215
>BQ750934 similar to PIR|T19673|T19 hypothetical protein C33B4.3 -
Caenorhabditis elegans, partial (1%)
Length = 627
Score = 40.0 bits (92), Expect = 0.001
Identities = 42/167 (25%), Positives = 67/167 (39%), Gaps = 3/167 (1%)
Frame = +2
Query: 75 FQNQANNTEEGITIFVPKDSSF---ASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFK 131
F +A+ TE+ + SS A+ P+ S + + + V + + +
Sbjct: 128 FSPEASATEDSVLTSTTASSSVETTAAAVFPTTSAVANGTLTAVTASETVTDEVASSSLS 307
Query: 132 NLSQTASTPTFAGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPE 191
LS T S+ T A +T + + V S S+ + + A +I PE
Sbjct: 308 TLSATNSSVTSAAPSFTAE-AETTSPVSSASSTSLETLDATTTAVPSSSI--------PE 460
Query: 192 AIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDRSSS 238
+ T +PP L P T A + S T + S SSS SS+ SSS
Sbjct: 461 SS-STSLPPTLVPQNTTSPASSPSSITTSTTSSSSSSSSSTTSSSSS 598
>TC80872 similar to GP|22597168|gb|AAN03471.1 unknown protein {Glycine max},
partial (39%)
Length = 786
Score = 38.9 bits (89), Expect = 0.002
Identities = 14/24 (58%), Positives = 19/24 (78%)
Frame = +3
Query: 21 AKTVSPPSPPAESPTPAPAPAPTP 44
AK ++ P PP ++P+PAPAPAP P
Sbjct: 447 AKPIAQPGPPKQNPSPAPAPAPAP 518
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.130 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,273,295
Number of Sequences: 36976
Number of extensions: 162484
Number of successful extensions: 5681
Number of sequences better than 10.0: 294
Number of HSP's better than 10.0 without gapping: 2397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4665
length of query: 262
length of database: 9,014,727
effective HSP length: 94
effective length of query: 168
effective length of database: 5,538,983
effective search space: 930549144
effective search space used: 930549144
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Medicago: description of AC141110.2