TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140913.3 - phase: 0 
         (476 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CA921522                                                              249  1e-66
BE203370                                                              150  1e-36
BQ123351                                                              108  6e-24
AL366606                                                              106  2e-23
AW736370                                                               49  5e-06
TC81667 similar to GP|8777488|dbj|BAA97068.1 contains similarity...    31  1.2
CA918173 weakly similar to GP|11034537|dbj putative glucosyl tra...    30  2.6
TC85009 similar to GP|14531294|gb|AAK66160.1 pectate lyase B {Fr...    29  3.5
TC89517 weakly similar to PIR|A85475|A85475 hypothetical protein...    29  3.5
TC87036 similar to GP|11138330|gb|AAG31326.1 putative serine/thr...    28  5.9
BQ141541 similar to GP|334068|gb|A ORF2 {Pseudorabies virus}, pa...    28  5.9
AL369139 weakly similar to GP|21554368|gb| unknown {Arabidopsis ...    28  7.7

>CA921522 
          Length = 767

 Score =  249 bits (637), Expect = 1e-66
 Identities = 128/256 (50%), Positives = 168/256 (65%), Gaps = 8/256 (3%)
 Frame = +3

Query: 111 KTSDVSNHLITKSHIRGFTSKYLLDQANLSTTRQDTL------EAILALLIYGLLLFPNL 164
           +T +V  HLIT+    GF++ +L ++    TT  D +       +ILALL+YGL+LFP+L
Sbjct: 3   ETDEVKTHLITRGKFLGFSTDFLYER----TTFFDKMGVAYAFNSILALLVYGLVLFPSL 170

Query: 165 DNFVDMNAIEIFHSKNPVPTLLADTYHAIHDRTLKGRGYILCCISLLYRWFISHLPSS-- 222
           DNFVD+ AI+IF S+NPVPTLL DTY +IH RT  GRG ILCC  LLYRW  SHLP +  
Sbjct: 171 DNFVDIKAIQIFLSRNPVPTLLGDTYLSIHRRTQAGRGTILCCAQLLYRWITSHLPRTPR 350

Query: 223 FHDNSENWSYSQRIMALTPNEVVWLTPAAQVKEIIMGCGDFLNVPLLGIRGGINYNPELA 282
           F  N EN  +S+R+M+LTP EVVW         II  CG F NVPLLG+ GGI+YNP LA
Sbjct: 351 FTTNPENLLWSKRLMSLTPAEVVWYDRVYDKGTIIDSCGKFANVPLLGMEGGISYNPTLA 530

Query: 283 MRQFGFPMKSKPINLATSPEFFFYTNAPTGQRKAFMDAWSKVRRKSVRHLGVRSGVAHEA 342
             QFG+PM+ KP+++     ++   +  TG R+  + AW  +RR+    LG ++G    +
Sbjct: 531 RHQFGYPMERKPLSIYLENVYYLNADDSTGMREHVVRAWHTIRRRDKDQLGKKTGAISSS 710

Query: 343 YTQWVIDRAEEIGMPY 358
           YTQWVIDRA +IGMPY
Sbjct: 711 YTQWVIDRAVQIGMPY 758


>BE203370 
          Length = 454

 Score =  150 bits (378), Expect = 1e-36
 Identities = 79/150 (52%), Positives = 100/150 (66%), Gaps = 2/150 (1%)
 Frame = +1

Query: 63  CFTFPDFQLVPTLEAYSNLVGLPIAEKAPFTGPGTSLTPLVIAKDLYLKTSDVSNHLITK 122
           CFTFPD+QL PTLE YS LVG P+ +K PFTG         IA  L+L+TS +   L  K
Sbjct: 4   CFTFPDYQLAPTLEEYSYLVG*PVLDKVPFTGFEPIPKAATIADALHLETSLIKAKLTIK 183

Query: 123 SHIRGFTSKYLLDQAN--LSTTRQDTLEAILALLIYGLLLFPNLDNFVDMNAIEIFHSKN 180
            ++    +K+L  QA+        D   +ILALLIYGL+LFPN+DN+VD++AI++F +KN
Sbjct: 184 GNLPSLPTKFLYQQASDFAKVDNVDAFYSILALLIYGLVLFPNVDNYVDIHAIQMFLTKN 363

Query: 181 PVPTLLADTYHAIHDRTLKGRGYILCCISL 210
           PVPTLLAD YH+IHDR   GRG IL C  L
Sbjct: 364 PVPTLLADMYHSIHDRNQVGRGAILGCAPL 453


>BQ123351 
          Length = 725

 Score =  108 bits (269), Expect = 6e-24
 Identities = 60/153 (39%), Positives = 93/153 (60%)
 Frame = +2

Query: 317 FMDAWSKVRRKSVRHLGVRSGVAHEAYTQWVIDRAEEIGMPYPAMRYVSSSTPSMPLPLL 376
           F+ AW  V ++    LG RS + +E+YT+WVIDRA + G+P+P  R  SS+T S  LP+ 
Sbjct: 8   FIQAWRAVHKREKGQLGRRS*LVYESYTKWVIDRAAKNGIPFPLQRLPSSTTLSPSLPMT 187

Query: 377 PATQDMYQEHLAMESREKQVWKARYNQAENLIMTLDGRDEQKTHENLMLKKELAKARREL 436
             T++  Q  LA  +REK  W+ RY +AE+ I TL G+ EQK HE L +++++ +    L
Sbjct: 188 SKTKEEAQYLLAEMTREKDTWRIRYMEAESEIGTLRGQVEQKDHELLKMRQQMIERDDLL 367

Query: 437 EEKDELLMRDSKRARGRRDFFARYCDSDSESDD 469
           +EKD+LL +   + + R D    +   DS+ +D
Sbjct: 368 QEKDKLLKKHITK-KQRMDSMDLFDGPDSDFED 463


>AL366606 
          Length = 393

 Score =  106 bits (264), Expect = 2e-23
 Identities = 56/78 (71%), Positives = 59/78 (74%), Gaps = 6/78 (7%)
 Frame = -1

Query: 149 AILALLIYGLLLFPNLDNFVDMNAIEIFHSKNPVPTLLADTYHAIHDRTLKGRGYILCCI 208
           AI   L  GL+LFPNLDNFVDMNAIE+FHSKNPVPTLLADTYHAIHDRTLKGRGYIL   
Sbjct: 381 AIXLCLSTGLILFPNLDNFVDMNAIEVFHSKNPVPTLLADTYHAIHDRTLKGRGYILWLH 202

Query: 209 SLL------YRWFISHLP 220
            L       +R F S LP
Sbjct: 201 ILFSNRVVYFRTFRSSLP 148


>AW736370 
          Length = 488

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 29/90 (32%), Positives = 43/90 (47%)
 Frame = -2

Query: 368 TPSMPLPLLPATQDMYQEHLAMESREKQVWKARYNQAENLIMTLDGRDEQKTHENLMLKK 427
           TP+ PLP+   T+  YQE L    RE   WK  Y + +    T+ G  EQ+ +++     
Sbjct: 481 TPAPPLPMTFDTEKEYQERLTEAEREIHRWKREYQKKDQDYETVMGLLEQEAYDSR*KDV 302

Query: 428 ELAKARRELEEKDELLMRDSKRARGRRDFF 457
            +AK    ++E D  L R   R + R D F
Sbjct: 301 IIAKLNERIKENDAALDRIPGRKKRRMDLF 212


>TC81667 similar to GP|8777488|dbj|BAA97068.1 contains similarity to SF16
           protein~gene_id:K15M2.19 {Arabidopsis thaliana}, partial
           (34%)
          Length = 1216

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 18/59 (30%), Positives = 25/59 (41%)
 Frame = -2

Query: 273 GGINYNPELAMRQFGFPMKSKPINLATSPEFFFYTNAPTGQRKAFMDAWSKVRRKSVRH 331
           GG+N NP        FP       L  +P   F+T A     K  +  W  + R+S+RH
Sbjct: 780 GGLNLNPN-------FPRTRCNPTLHPAPTPAFFTKAIRSLTKILVTVWPPLMRESIRH 625


>CA918173 weakly similar to GP|11034537|dbj putative glucosyl transferase
           {Oryza sativa (japonica cultivar-group)}, partial (19%)
          Length = 769

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -3

Query: 49  LVHTLVQFYDPSFRCFTFPDFQ 70
           L+HTLVQ + PS RCF FP+++
Sbjct: 113 LIHTLVQKW-PS*RCFPFPNYE 51


>TC85009 similar to GP|14531294|gb|AAK66160.1 pectate lyase B {Fragaria x
           ananassa}, partial (55%)
          Length = 914

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +3

Query: 304 FFYTNAPTGQRKAFMDAWSKVRRKSVRHLGVRSGVAHEAYTQWVIDRAEEI 354
           F +TNA        ++   K++ +S+ +  +   ++H+A  +  +D  EEI
Sbjct: 138 FAFTNAIDSNESRVVNGEEKLKMQSLNNSSMAESLSHDAINEHAVDNPEEI 290


>TC89517 weakly similar to PIR|A85475|A85475 hypothetical protein AT4g40080
           [imported] - Arabidopsis thaliana, partial (46%)
          Length = 1177

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 23/87 (26%), Positives = 34/87 (38%), Gaps = 1/87 (1%)
 Frame = -3

Query: 161 FPNLDNFVDMNAIEIFHSKNPVPTLLADTYHAIHDRTLKGRGYILCCISLLYRWFISHLP 220
           F  L  F++ N     H  NP+       +H IH        Y+   + L   W I   P
Sbjct: 764 FLPLPKFINSNQ-NFIHHHNPI------IFHQIH--------YLNNHLVLFTHWSIRFFP 630

Query: 221 SSFHDNSENWSYS-QRIMALTPNEVVW 246
           +SFH   +  S+S Q  +    N  +W
Sbjct: 629 NSFHQGQQRISFS*QITIGKIRNSFLW 549


>TC87036 similar to GP|11138330|gb|AAG31326.1 putative serine/threonine
           kinase GDBrPK {Vitis vinifera}, partial (66%)
          Length = 1212

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 214 WFISHLPSSFHDNSENWS 231
           WF+ +LP  F ++ ENWS
Sbjct: 692 WFLKNLPLEFMEDGENWS 745


>BQ141541 similar to GP|334068|gb|A ORF2 {Pseudorabies virus}, partial (2%)
          Length = 1320

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +1

Query: 414 RDEQKTHENLMLKKELAKARRELEEKDELLMRDSKRARGRRDFFARYCDSDSESDDPPTT 473
           R E + +E+ + ++E    RRE E++     R+++ ARG R    R  + DS + D  T 
Sbjct: 751 RTEDRKYEHRIAERE---RRREGEKEASNTRREARSARGGRRGNVRRAEEDSGTKDTATA 921

Query: 474 SY 475
            +
Sbjct: 922 RH 927


>AL369139 weakly similar to GP|21554368|gb| unknown {Arabidopsis thaliana},
           partial (11%)
          Length = 388

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
 Frame = +3

Query: 414 RDEQKTHENLMLKKEL-------AKARRELEEKDELLMRDSKRARGRRDFFARYCDSDSE 466
           RD +KT EN  +  E         K  RE  E D     D +R R R+       +SDSE
Sbjct: 66  RDSRKTRENSDIDTETDRKHISSKKKSRESSESDS----DKRRRRKRKSRRKYSSESDSE 233

Query: 467 SD 468
           SD
Sbjct: 234 SD 239


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,824,265
Number of Sequences: 36976
Number of extensions: 207305
Number of successful extensions: 1177
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of query: 476
length of database: 9,014,727
effective HSP length: 100
effective length of query: 376
effective length of database: 5,317,127
effective search space: 1999239752
effective search space used: 1999239752
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)