TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140849.7 + phase: 0 /pseudo/partial
         (191 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AJ498197 similar to SP|O04630|SYT_ Threonyl-tRNA synthetase  mit...    66  7e-12
TC84867 similar to GP|21554204|gb|AAM63283.1 putative 10kd chape...    47  6e-06
BM814757                                                               26  8.3
TC89919 similar to GP|16323334|gb|AAL15380.1 AT3g15355/MJK13_1 {...    26  8.3

>AJ498197 similar to SP|O04630|SYT_ Threonyl-tRNA synthetase  mitochondrial
           precursor (EC 6.1.1.3) (Threonine--tRNA ligase)
           (ThrRS)., partial (19%)
          Length = 496

 Score = 66.2 bits (160), Expect = 7e-12
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = +3

Query: 4   TKHGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVV 49
           T++GCKLCIGPCTT   GFYYDA Y +LGL D  FK IE+ A K V
Sbjct: 357 TEYGCKLCIGPCTTRGEGFYYDAFYGDLGLNDDHFKQIEAVALKAV 494


>TC84867 similar to GP|21554204|gb|AAM63283.1 putative 10kd chaperonin
           {Arabidopsis thaliana}, partial (80%)
          Length = 587

 Score = 46.6 bits (109), Expect = 6e-06
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = -3

Query: 172 NKLMDFIRNQYRHRGYQEVK 191
           NKLMDFIRNQYRHRGYQEVK
Sbjct: 585 NKLMDFIRNQYRHRGYQEVK 526


>BM814757 
          Length = 665

 Score = 26.2 bits (56), Expect = 8.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 139 YDHRILGLKQELVSLHEW 156
           +D R L LK ELV+LH W
Sbjct: 77  FDIRALHLKMELVALHYW 130


>TC89919 similar to GP|16323334|gb|AAL15380.1 AT3g15355/MJK13_1 {Arabidopsis
           thaliana}, partial (14%)
          Length = 640

 Score = 26.2 bits (56), Expect = 8.3
 Identities = 15/43 (34%), Positives = 25/43 (57%)
 Frame = -2

Query: 133 FKEAKKYDHRILGLKQELVSLHEWSPGSWFFLPHGALIYNKLM 175
           F+++ KY    + L+   + L  +SP  W  L HG +I+NK+M
Sbjct: 468 FEDSHKYCIWQMLLQHFPLFLDLFSPTLWILL-HGGMIFNKVM 343


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.329    0.146    0.474 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,928,036
Number of Sequences: 36976
Number of extensions: 98232
Number of successful extensions: 479
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of query: 191
length of database: 9,014,727
effective HSP length: 91
effective length of query: 100
effective length of database: 5,649,911
effective search space: 564991100
effective search space used: 564991100
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)