Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140849.12 + phase: 0 
         (256 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {...    46  1e-05
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr...    43  1e-04
BQ751767 similar to SP|O10302|GTA_N Probable global transactivat...    40  7e-04
BQ141533 similar to GP|15278108|gb cystathionine beta-lyase {Neu...    37  0.006
BQ751233 similar to GP|18307448|em probable low-affinity hexose ...    37  0.006
TC90418 similar to GP|11762174|gb|AAG40365.1 At1g17620 {Arabidop...    37  0.007
TC92256 similar to PIR|T49842|T49842 related to Na+/H+-exchangin...    36  0.013
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo...    36  0.017
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar...    36  0.017
BI263340 weakly similar to PIR|T49223|T492 uclacyanin 3 [importe...    35  0.028
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un...    35  0.028
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel...    35  0.037
AL385005 weakly similar to GP|21438547|emb Ratten cDNA {Rattus n...    35  0.037
TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot...    34  0.048
BE323271 similar to PIR|T52305|T523 En/Spm-like transposon prote...    34  0.048
BQ150994 similar to GP|22122173|dbj preproneuropeptide B {Homo s...    34  0.063
BQ752101 similar to PIR|S57177|S57 branched-chain-amino-acid tra...    34  0.063
TC90175 weakly similar to GP|6002488|gb|AAF00009.1| hypothetical...    34  0.063
TC93842 weakly similar to GP|13365999|dbj|BAB39276. hypothetical...    33  0.11
BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus...    33  0.11

>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
           thaliana}, partial (39%)
          Length = 883

 Score = 46.2 bits (108), Expect = 1e-05
 Identities = 35/85 (41%), Positives = 51/85 (59%), Gaps = 1/85 (1%)
 Frame = -1

Query: 39  GWGSKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTS 98
           GWG  SSSS+S++  SS S  +++ +SSPS  S+ PSS      P  SGS   S  ++ S
Sbjct: 571 GWGVSSSSSSSSS--SSSSSPSSSSSSSPSSSSSSPSS--LPPAPLASGSSSGSPSSSPS 404

Query: 99  AWG-SSSRPSSASGPPTSNQTSQTS 122
           +   SSS PSS+S   +S+ +S +S
Sbjct: 403 SPE*SSSSPSSSSSCTSSSSSSSSS 329



 Score = 35.4 bits (80), Expect = 0.022
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
 Frame = -1

Query: 49  SNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSS 108
           +  WG S S ++++ +SS S     PSS  S +  S+S S  +      ++  SS  PSS
Sbjct: 577 AGGWGVSSSSSSSSSSSSSS-----PSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPSS 413

Query: 109 ASGPP--TSNQTSQTSLRPRSAETRPGSSHLS 138
           +   P  +S+  S +S    S+ +   SS +S
Sbjct: 412 SPSSPE*SSSSPSSSSSCTSSSSSSSSSSSVS 317


>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
           {Arabidopsis thaliana}, partial (50%)
          Length = 753

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 29/85 (34%), Positives = 48/85 (56%)
 Frame = -2

Query: 39  GWGSKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTS 98
           G  S SSSS+S++  S  S ++++ +SS S  S  P+  G+G+   ++ S  +S   ++S
Sbjct: 545 G*SSSSSSSSSSSSSSPSSLSSSSSSSSSSSSSLPPAPFGTGSSSGSASSSSSSPEKSSS 366

Query: 99  AWGSSSRPSSASGPPTSNQTSQTSL 123
              SSS  SS+S   +S+  S  SL
Sbjct: 365 LSSSSSFTSSSSSSSSSSSVSLPSL 291



 Score = 31.2 bits (69), Expect = 0.41
 Identities = 24/73 (32%), Positives = 36/73 (48%), Gaps = 1/73 (1%)
 Frame = -2

Query: 77  GGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAETRP-GSS 135
           GG  +  S+S S  +S  ++ S+  SSS  SS+S PP    T  +S    S+ + P  SS
Sbjct: 548 GG*SSSSSSSSSSSSSSPSSLSSSSSSSSSSSSSLPPAPFGTGSSSGSASSSSSSPEKSS 369

Query: 136 HLSRFAEHVGENS 148
            LS  +     +S
Sbjct: 368 SLSSSSSFTSSSS 330


>BQ751767 similar to SP|O10302|GTA_N Probable global transactivator. [OpMNPV]
           {Orgyia pseudotsugata multicapsid polyhedrosis virus},
           partial (7%)
          Length = 771

 Score = 40.4 bits (93), Expect = 7e-04
 Identities = 46/142 (32%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
 Frame = +2

Query: 6   RRWTSSTRRGGMTVLGKVAVPKPINLPSQRGTLGWGSKSSSSASNAWGSSLSPNANAGAS 65
           RRWT S RR   T   +   P   + PS  G     +++S+ ++    SS    ++A   
Sbjct: 383 RRWTRSRRR---TWW*RRTTP---SRPSSTGR----NRASTRSAGTESSSTRRTSSAARP 532

Query: 66  SPSHLSARPS----SGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQT 121
            PS   A PS     G S  RPS +G       T   +W     PSSA  P T+  +S  
Sbjct: 533 RPSTRPAAPSRPTRDGASPARPSRTGCP-----TLAPSW-----PSSAPAPLTTRASSAA 682

Query: 122 SLR---PRSAETRPGS-SHLSR 139
           + R    R+A TR GS  H SR
Sbjct: 683 TSRSPLSRAARTRTGSREHSSR 748


>BQ141533 similar to GP|15278108|gb cystathionine beta-lyase {Neurospora
           crassa}, partial (44%)
          Length = 609

 Score = 37.4 bits (85), Expect = 0.006
 Identities = 34/126 (26%), Positives = 49/126 (37%)
 Frame = +2

Query: 10  SSTRRGGMTVLGKVAVPKPINLPSQRGTLGWGSKSSSSASNAWGSSLSPNANAGASSPSH 69
           S+TR            P  ++L S  G     S+ S+SA   W SS           P+ 
Sbjct: 176 STTRHSATGFTSPSTHPAAVSLHSTHGCFSAASRRSASA---WKSS----------RPTP 316

Query: 70  LSARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAE 129
            ++ PSS  + +R +T         T T AW  +  P   S   TS   S +S  PRS  
Sbjct: 317 CASPPSSSRTVSRCATPA*SRIRSTTCTGAWRGARAPCCPSRLATSPYPSASSRAPRSGP 496

Query: 130 TRPGSS 135
           +   S+
Sbjct: 497 SASPSA 514


>BQ751233 similar to GP|18307448|em probable low-affinity hexose transporter
           HXT3 {Neurospora crassa}, partial (30%)
          Length = 659

 Score = 37.4 bits (85), Expect = 0.006
 Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
 Frame = +1

Query: 14  RGGMTVLGKVAVPKPINLPSQRGTLGWGSKSSS---SASNAWGSSLSPNANAGASSPSHL 70
           R   +V    AV    +LP    TL   +  S    S   +  SS S  +  G SSPS +
Sbjct: 304 RAPSSVCSASAVSSVPSLPVSSPTLSAAA*PSPPLPSGPASVSSSRSRPSPPGTSSPSAV 483

Query: 71  SARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPR 126
           S+  S+  S   PS+S     S L  +SA  SSSRP+S+S P  S      +  PR
Sbjct: 484 SSTVSA--SAPSPSSSPCTSPSPLRPSSA-ASSSRPTSSSSPSASGPPRWVTGAPR 642


>TC90418 similar to GP|11762174|gb|AAG40365.1 At1g17620 {Arabidopsis
           thaliana}, partial (9%)
          Length = 835

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 40/119 (33%), Positives = 50/119 (41%), Gaps = 1/119 (0%)
 Frame = +1

Query: 24  AVPKPINL-PSQRGTLGWGSKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTR 82
           AVP  +   PS  G   + S SSSS++     S S        SPSHLS  P+S      
Sbjct: 172 AVPAAVAAAPSSSGFSSYFSSSSSSSA*PAPLSTSSTVPTVLPSPSHLSNFPTSTSPPPP 351

Query: 83  PSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAETRPGSSHLSRFA 141
           PST  S   S   T     ++  PS  + PP     SQ SL   ++   P   HLS  A
Sbjct: 352 PSTQSSTSTSLQKTL----TNISPSFTNQPP-----SQFSLTTSTSVKEP--YHLSNMA 495


>TC92256 similar to PIR|T49842|T49842 related to Na+/H+-exchanging protein
           [imported] - Neurospora crassa, partial (43%)
          Length = 1166

 Score = 36.2 bits (82), Expect = 0.013
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 3/140 (2%)
 Frame = +1

Query: 26  PKPINLPSQRGTLGWGSKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPST 85
           P+  ++ S+  +  W S SSSS+     SS      A + SP   S+ PS    G RP+ 
Sbjct: 301 PRKTSIASRSHSRAWCSASSSSSP---ASSCPAGTYAPSGSPWPYSSAPS*PACGWRPAC 471

Query: 86  SGSDMASELTTTSAWGSSS--RPSSASGPP-TSNQTSQTSLRPRSAETRPGSSHLSRFAE 142
             +       +   W S+   RP +   P   S  +S T++  RS  T   +S       
Sbjct: 472 LFTPWCRTFRSCMLWPSAPA*RPPTRCCPT**SRASSPTTISQRSCRTSSSASRAPMTDS 651

Query: 143 HVGENSVAWNGARTTETLGI 162
            +  +S+    + T  T GI
Sbjct: 652 GIRSSSLRCT*SSTLATAGI 711


>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
           falciparum 3D7}, partial (10%)
          Length = 633

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 24/65 (36%), Positives = 37/65 (56%)
 Frame = -3

Query: 71  SARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAET 130
           S+ PSS  S +  S+S S  +S  + +S+  SSS  SS+S   +S+ +S +S    S+ T
Sbjct: 247 SSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSCSSSSSSSCSS---SSSST 77

Query: 131 RPGSS 135
            P SS
Sbjct: 76  SPSSS 62



 Score = 35.0 bits (79), Expect = 0.028
 Identities = 27/76 (35%), Positives = 40/76 (52%)
 Frame = -3

Query: 47  SASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRP 106
           S  N  GS      +  +SSPS  S+  SS  S +  S+S S  +S  +++S+  SSS  
Sbjct: 298 SICNNSGSGRVLILSISSSSPSSSSS-SSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSC 122

Query: 107 SSASGPPTSNQTSQTS 122
           SS+S    S+ +S TS
Sbjct: 121 SSSSSSSCSSSSSSTS 74



 Score = 27.3 bits (59), Expect = 5.9
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -3

Query: 84  STSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAETRPGSSHLS 138
           + SGS     L+ +S+  SSS  SS+S   +S+ +S +S    S+ +   SS  S
Sbjct: 289 NNSGSGRVLILSISSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSS 125



 Score = 26.9 bits (58), Expect = 7.7
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -3

Query: 42  SKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGS 79
           S SSSS+S++  SS   ++++ + S S  S  PSS  S
Sbjct: 169 SSSSSSSSSSSSSSSCSSSSSSSCSSSSSSTSPSSSSS 56


>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
           thaliana}, partial (3%)
          Length = 805

 Score = 35.8 bits (81), Expect = 0.017
 Identities = 32/116 (27%), Positives = 54/116 (45%), Gaps = 6/116 (5%)
 Frame = +3

Query: 44  SSSSASNAWGSSLSPNANAGASSPSHLSARP--SSGGSGTRPSTSG----SDMASELTTT 97
           SS SAS+   ++ SP A+  ASSP   +  P  S+  S   P+T+     +  +S ++T 
Sbjct: 99  SSPSASSPVSTTTSPPASTPASSPVSTTTSPPASTPASSPVPTTTSPPAPTPASSPVSTN 278

Query: 98  SAWGSSSRPSSASGPPTSNQTSQTSLRPRSAETRPGSSHLSRFAEHVGENSVAWNG 153
           S   S +    A+  P+ + T+  S  P S      SS+ +     +G  S + +G
Sbjct: 279 SPTASPAGSLPAAATPSPSSTTAGSPSPSSTPPGTRSSNETTPGRSIGVASASPSG 446


>BI263340 weakly similar to PIR|T49223|T492 uclacyanin 3 [imported] -
           Arabidopsis thaliana, partial (14%)
          Length = 681

 Score = 35.0 bits (79), Expect = 0.028
 Identities = 30/89 (33%), Positives = 38/89 (41%), Gaps = 8/89 (8%)
 Frame = +3

Query: 55  SLSPNANAGASSPSHLSARPSSGGSG----TRPSTSGSDMASELTTTSAWGSSSRPSSAS 110
           S SP+ +  +S PSH S+ P S G G    T PST          +TS    +  PS+ S
Sbjct: 168 STSPS-HGSSSPPSHGSSSPPSHGGGYYTPTPPSTGCGYSPPHDPSTSTPSHNQTPSTPS 344

Query: 111 GPPTS----NQTSQTSLRPRSAETRPGSS 135
            PP+S    N    T   P    T P  S
Sbjct: 345 NPPSSGGYYNSPPSTPTDPPVTLTPPSPS 431


>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
           protein {Arabidopsis thaliana}, partial (46%)
          Length = 2077

 Score = 35.0 bits (79), Expect = 0.028
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
 Frame = -2

Query: 30  NLPSQRGTLGWGSKSSSSASNAWGSSLSPNANAGASSPS-----HLSARPSSGGSGTRPS 84
           NL S    L +   SSSS+S++  SS S ++++ +SSPS        + PS   S +  S
Sbjct: 582 NLSSIPPPLTFSFSSSSSSSSSLPSSSSSSSSSKSSSPSLPPFAFFFSTPSKSSSSSSNS 403

Query: 85  TSGSDMASELTTTSAWGSSSRPSS 108
           +S S ++S   +T  + S+  P+S
Sbjct: 402 SSKSSLSSSSNSTRFFFSNFFPTS 331



 Score = 31.6 bits (70), Expect = 0.31
 Identities = 34/101 (33%), Positives = 53/101 (51%), Gaps = 17/101 (16%)
 Frame = -2

Query: 42  SKSSSSASNAWGSSLSPNANAGASSPSHLSARPSS--------GGSGTRPSTSGS----- 88
           S SSSS+S++  SS+S +    +SS S LS+  SS          S ++ S + S     
Sbjct: 756 SSSSSSSSSSSSSSISNSPAFSSSSSSSLSSSASSLSSPFS*LSSSFSKYSVNSSIFKNL 577

Query: 89  -DMASELT---TTSAWGSSSRPSSASGPPTSNQTSQTSLRP 125
             +   LT   ++S+  SSS PSS+S   +S+++S  SL P
Sbjct: 576 SSIPPPLTFSFSSSSSSSSSLPSSSSS-SSSSKSSSPSLPP 457


>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
           herpesvirus 3}, partial (8%)
          Length = 986

 Score = 34.7 bits (78), Expect = 0.037
 Identities = 30/75 (40%), Positives = 42/75 (56%)
 Frame = -2

Query: 41  GSKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAW 100
           G K+SSS+S++  SSLS      +S+PS  S+ P S  S    S+S S  +S  ++ S+ 
Sbjct: 757 GCKASSSSSSS-SSSLS-----SSSTPSSSSSSPPSSSSS---SSSSSSSSSSWSSPSSS 605

Query: 101 GSSSRPSSASGPPTS 115
            SSS  SSA   P S
Sbjct: 604 SSSSPFSSAPPAPPS 560



 Score = 33.5 bits (75), Expect = 0.082
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = -2

Query: 52  WGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSAS 110
           +G   + ++++ +SS    S+ PSS  S + P +S S  +S  +++S+W S S  SS+S
Sbjct: 763 FGGCKASSSSSSSSSSLSSSSTPSS--SSSSPPSSSSSSSSSSSSSSSWSSPSSSSSSS 593



 Score = 32.7 bits (73), Expect = 0.14
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = -2

Query: 80  GTRPSTSGSDMASELTTTSAWGSSSRPSS-ASGPPTSNQTSQTSLRPRSAETRPGSSHLS 138
           G + S+S S  +S L+      SSS PSS +S PP+S+ +S +S    S+ + P SS  S
Sbjct: 757 GCKASSSSSSSSSSLS------SSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSSS 596



 Score = 30.8 bits (68), Expect = 0.53
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
 Frame = -2

Query: 32  PSQRGTLGWGSKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGT---------- 81
           PS   +    S SSSS+S++  SS S  +++ +SSP   S+ P +  SG           
Sbjct: 697 PSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSSSSP--FSSAPPAPPSGAFFELLLLLEL 524

Query: 82  --RPSTSGSDMASELTTTSAWGSSSRPSSASGP 112
              P  S  D +S  +  +   SSS  SS+S P
Sbjct: 523 LPYPPPSSDDNSSSPSPNAPSPSSSSSSSSSLP 425



 Score = 30.0 bits (66), Expect = 0.91
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -2

Query: 77  GGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAET 130
           GG     S+S S  +   ++T +  SSS PSS+S   +S+ +S +   P S+ +
Sbjct: 760 GGCKASSSSSSSSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSS 599



 Score = 27.7 bits (60), Expect = 4.5
 Identities = 18/69 (26%), Positives = 34/69 (49%)
 Frame = -2

Query: 60  ANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTS 119
           +++ +SS S LS+  +   S + P +S S  +S  +++S+W      S +S   +S  +S
Sbjct: 745 SSSSSSSSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWS-----SPSSSSSSSPFSS 581

Query: 120 QTSLRPRSA 128
                P  A
Sbjct: 580 APPAPPSGA 554


>AL385005 weakly similar to GP|21438547|emb Ratten cDNA {Rattus norvegicus},
           partial (5%)
          Length = 469

 Score = 34.7 bits (78), Expect = 0.037
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
 Frame = +2

Query: 53  GSSLSPNANAG----ASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSS 108
           G  LS N  +G    A+SPS  ++ PS     T PS SGS       T     SS  P  
Sbjct: 20  GQKLSINVGSGSNSPATSPSPYASSPSPSTGATPPSASGSPSPGSPVTP----SSQSPGG 187

Query: 109 ASGPPTSN 116
           +  PP  N
Sbjct: 188 SVSPPPEN 211


>TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
           {Homo sapiens}, partial (11%)
          Length = 591

 Score = 34.3 bits (77), Expect = 0.048
 Identities = 32/124 (25%), Positives = 50/124 (39%), Gaps = 11/124 (8%)
 Frame = +2

Query: 22  KVAVPK----PINLPSQRGTLGWGSKSSSSASNAWG-----SSLSPNANAGASSPSHLSA 72
           KVA+P     P  +P  +       KSS ++   W      S  +  A+A  +S S + +
Sbjct: 20  KVAIPSDQSIPQFVPPNKNCHPKSPKSSRNSQQKWSRTS*SSERATPASASLTSSSSIPS 199

Query: 73  RPS--SGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAET 130
           + S  S    +RP  + +  A     +S   S + PSS    P S  T +T     SA  
Sbjct: 200 QRSRTSRSPSSRPRHTSTGTAPPFAVSSPASSPTTPSSTRSSPGSTSTPRTPSTSFSARP 379

Query: 131 RPGS 134
            P +
Sbjct: 380 PPST 391



 Score = 32.7 bits (73), Expect = 0.14
 Identities = 31/130 (23%), Positives = 56/130 (42%)
 Frame = +2

Query: 6   RRWTSSTRRGGMTVLGKVAVPKPINLPSQRGTLGWGSKSSSSASNAWGSSLSPNANAGAS 65
           ++W+ ++           ++    ++PSQR      S SS     + G++     ++ AS
Sbjct: 116 QKWSRTS*SSERATPASASLTSSSSIPSQRSRTS-RSPSSRPRHTSTGTAPPFAVSSPAS 292

Query: 66  SPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRP 125
           SP+  S+  SS GS + P T  +              S+RP  ++ PPT  ++  T  + 
Sbjct: 293 SPTTPSSTRSSPGSTSTPRTPSTSF------------SARPPPSTPPPTPFRSRPT--KG 430

Query: 126 RSAETRPGSS 135
            S  + P SS
Sbjct: 431 SSPSSTPSSS 460


>BE323271 similar to PIR|T52305|T523 En/Spm-like transposon protein
           [imported] - Arabidopsis thaliana, partial (7%)
          Length = 431

 Score = 34.3 bits (77), Expect = 0.048
 Identities = 29/86 (33%), Positives = 38/86 (43%), Gaps = 4/86 (4%)
 Frame = +3

Query: 55  SLSPNANAGASSPSHLSARPSSGGSG----TRPSTSGSDMASELTTTSAWGSSSRPSSAS 110
           S SP+ +  +S PSH S+ P S G G    T PST          +TS    +  PS+ S
Sbjct: 159 STSPS-HGSSSPPSHGSSSPPSHGGGYYTPTPPSTGCGYSPPHDPSTSTPSHNQTPSTPS 335

Query: 111 GPPTSNQTSQTSLRPRSAETRPGSSH 136
            PP+S     +   P S  T P   H
Sbjct: 336 NPPSSGGYYNS---PPSTPTDPPE*H 404


>BQ150994 similar to GP|22122173|dbj preproneuropeptide B {Homo sapiens},
           partial (15%)
          Length = 1036

 Score = 33.9 bits (76), Expect = 0.063
 Identities = 26/99 (26%), Positives = 38/99 (38%)
 Frame = +2

Query: 32  PSQRGTLGWGSKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMA 91
           PS+RGT   G++  S+         +PNA    + P H             P    SD A
Sbjct: 329 PSRRGTRTRGNEKRSTPKTRPAEKRNPNAGRAPAPPGH------------NPPRETSDEA 472

Query: 92  SELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAET 130
              T      +++R  + + PP      + S  PRS ET
Sbjct: 473 RR-TQARREKTTNRARTKTKPPRKKTRQERSSAPRSGET 586


>BQ752101 similar to PIR|S57177|S57 branched-chain-amino-acid transaminase
           (EC 2.6.1.42) BAT2  cytosolic - yeast, partial (46%)
          Length = 720

 Score = 33.9 bits (76), Expect = 0.063
 Identities = 26/87 (29%), Positives = 42/87 (47%)
 Frame = -1

Query: 42  SKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAWG 101
           S S+  A   + SS  P+A     +     +RP +  S   P+ S +  +++ TT  A  
Sbjct: 696 SASALPAPPCFTSSPPPSAPTTLPASKPSPSRPPTTPSALGPAVSATKSSAQ-TTPPASC 520

Query: 102 SSSRPSSASGPPTSNQTSQTSLRPRSA 128
            SSRP +A+   T   +++ S  PRSA
Sbjct: 519 RSSRPPAAATSRTCGSSARRSTSPRSA 439


>TC90175 weakly similar to GP|6002488|gb|AAF00009.1| hypothetical protein
           {Penicillium chrysogenum}, partial (87%)
          Length = 1290

 Score = 33.9 bits (76), Expect = 0.063
 Identities = 28/89 (31%), Positives = 43/89 (47%), Gaps = 11/89 (12%)
 Frame = -3

Query: 55  SLSPNANAGASSPSHLSARPS-----SGGSGTR----PSTSGSDMASELTTTSAWGSSSR 105
           S SP+  + ASSP+  +ARPS     S  S TR    PS   +  A   ++ +A    ++
Sbjct: 901 SASPSRASPASSPTAPTARPSTSTTTSANSSTRRPGRPSPRPASPACPSSSAAAPSPRAK 722

Query: 106 PSSASG--PPTSNQTSQTSLRPRSAETRP 132
           PS ++G  PP +  T  +   P +A   P
Sbjct: 721 PSGSAGRRPPRAGTTPSSCRPPTTAACCP 635



 Score = 33.5 bits (75), Expect = 0.082
 Identities = 28/94 (29%), Positives = 37/94 (38%)
 Frame = -3

Query: 42  SKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGSDMASELTTTSAWG 101
           S+ S S++    S+        ++SPS  S   S      RPSTS         TTSA  
Sbjct: 967 SRQSPSSAQTTRSTRRRRPPTPSASPSRASPASSPTAPTARPSTST--------TTSANS 812

Query: 102 SSSRPSSASGPPTSNQTSQTSLRPRSAETRPGSS 135
           S+ RP   S  P S     +S    S   +P  S
Sbjct: 811 STRRPGRPSPRPASPACPSSSAAAPSPRAKPSGS 710



 Score = 27.3 bits (59), Expect = 5.9
 Identities = 17/59 (28%), Positives = 28/59 (46%)
 Frame = -3

Query: 75  SSGGSGTRPSTSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAETRPG 133
           +S  S +   T+ S       T SA  S + P+S+   PT+  ++ T+    S+  RPG
Sbjct: 970 TSRQSPSSAQTTRSTRRRRPPTPSASPSRASPASSPTAPTARPSTSTTTSANSSTRRPG 794


>TC93842 weakly similar to GP|13365999|dbj|BAB39276. hypothetical protein
           {Oryza sativa (japonica cultivar-group)}, partial (12%)
          Length = 697

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 29/107 (27%), Positives = 48/107 (44%)
 Frame = -3

Query: 29  INLPSQRGTLGWGSKSSSSASNAWGSSLSPNANAGASSPSHLSARPSSGGSGTRPSTSGS 88
           ++    R T    S ++ ++++   +S S       S+P+ LS    +      PS+S  
Sbjct: 671 VSATRSRATRTLPSSATCTSASCPRTSTSATTPRRTSTPASLSTASCTPRWRRGPSSSRK 492

Query: 89  DMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAETRPGSS 135
             A    +TSA   S RP+  SGPP    +S++  RP  A   P S+
Sbjct: 491 RCARSSRSTSA--RSRRPAPRSGPP----SSRSRKRPPRAGATPASA 369


>BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus
           norvegicus}, partial (9%)
          Length = 620

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 30/108 (27%), Positives = 50/108 (45%), Gaps = 1/108 (0%)
 Frame = +2

Query: 26  PKPINLPSQRGTLGWGSKSSSSASNAWGSSLSPNANAGASSPSHLSARPS-SGGSGTRPS 84
           P P      R      + +SSS S++  ++  P A + AS P   S  PS    + TR +
Sbjct: 68  PSPTRRAPPRPKTSRPTSTSSSPSSSRRATTRPRAPSQASPPGPPSRPPSPMPWT*TRRA 247

Query: 85  TSGSDMASELTTTSAWGSSSRPSSASGPPTSNQTSQTSLRPRSAETRP 132
            + +   + +  T+A  +++  + A+   T  QT  T+LR RS   RP
Sbjct: 248 ATAATRTAAIAVTAATRTATPATIATTAATRAQT--TALRTRSLYLRP 385


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.312    0.125    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,742,420
Number of Sequences: 36976
Number of extensions: 134841
Number of successful extensions: 1363
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of query: 256
length of database: 9,014,727
effective HSP length: 94
effective length of query: 162
effective length of database: 5,538,983
effective search space: 897315246
effective search space used: 897315246
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)


Medicago: description of AC140849.12