BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140774.7 + phase: 0 /pseudo
(998 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC82440 similar to PIR|H96793|H96793 unknown protein F14G6.18 [i... 728 0.0
TC80108 similar to GP|22045251|gb|AAL69483.2 putative SPL1-relat... 442 e-124
TC77807 similar to PIR|T52601|T52601 squamosa promoter binding p... 252 1e-71
TC88329 similar to PIR|T47827|T47827 squamosa promoter binding p... 168 8e-42
BG455868 similar to SP|Q38741|SBP1_ Squamosa-promoter binding pr... 124 2e-28
TC92499 homologue to PIR|T52594|T52594 squamosa promoter binding... 122 9e-28
AW691786 similar to PIR|T52298|T52 squamosa promoter binding pro... 118 1e-26
CA916954 similar to PIR|T52592|T525 squamosa-promoter binding pr... 103 4e-22
BG582086 similar to PIR|T52603|T526 squamosa promoter binding pr... 101 2e-21
TC81138 similar to PIR|T52606|T52606 squamosa promoter binding p... 100 4e-21
TC91858 similar to PIR|T52592|T52592 squamosa-promoter binding p... 97 2e-20
BG587629 similar to PIR|T52605|T526 squamosa promoter binding pr... 41 0.003
BQ751179 similar to GP|18025374|gb| MC8 {Micrococcus sp. 28}, pa... 35 0.11
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 33 0.42
TC89496 similar to GP|4585899|gb|AAD25561.1| unknown protein {Ar... 33 0.42
TC93151 homologue to GP|22136928|gb|AAM91808.1 unknown protein {... 33 0.71
TC76676 homologue to SP|P20363|TBA3_ARATH Tubulin alpha-3/alpha-... 32 0.93
TC88692 weakly similar to GP|13786462|gb|AAK39587.1 putative sph... 32 0.93
TC92982 similar to GP|23332794|gb|AAN27343.1 Sequence 13 from pa... 32 1.2
TC85149 similar to PIR|JC4780|JC4780 peroxidase (EC 1.11.1.7) 1B... 32 1.2
>TC82440 similar to PIR|H96793|H96793 unknown protein F14G6.18 [imported] -
Arabidopsis thaliana, partial (12%)
Length = 1244
Score = 728 bits (1878), Expect = 0.0
Identities = 365/390 (93%), Positives = 368/390 (93%), Gaps = 5/390 (1%)
Frame = +1
Query: 1 MEKVAPPLLPLHPPMLSSHQFYDSSNTKKRDLLSSYDVVHIPNDNWNPKEWNWDSIRFMT 60
MEKVAPPLLPLHPPMLSSHQFYDSSNTKKRDLLSSYDVVHIPNDNWNPKEWNWDSIRFMT
Sbjct: 46 MEKVAPPLLPLHPPMLSSHQFYDSSNTKKRDLLSSYDVVHIPNDNWNPKEWNWDSIRFMT 225
Query: 61 AKSTTVEPQQVEESLNLNLGSTGLVRPNKRIRSGSPTSASYPMCQVDNCKEDLSKAKDYH 120
AKSTTVEPQQVEESLNLNLGSTGLVRPNKRIRSGSPTSASYPMCQVDNCKEDLSKAKDYH
Sbjct: 226 AKSTTVEPQQVEESLNLNLGSTGLVRPNKRIRSGSPTSASYPMCQVDNCKEDLSKAKDYH 405
Query: 121 RRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGK-----RSCRRRLAGHNRRR 175
RRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGK +C A
Sbjct: 406 RRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGKPEL*TETCWS*SA*EENAA 585
Query: 176 RKTQPDEVAVGGSPPLNQVAANLEIFNLLTAIADGSQGKFEERRSQVPDKEQLVQILNRI 235
R +VA GGSPPLNQVAANLEIFNL+TAIADGSQGKFEERRSQVPDKEQLVQILNRI
Sbjct: 586 RM----KVAGGGSPPLNQVAANLEIFNLVTAIADGSQGKFEERRSQVPDKEQLVQILNRI 753
Query: 236 PLPADLTAKLLDVGNNLNAKNDNVQMETSPSYHHRDDQLNNAPPAPLTKDFLAVLSTTPS 295
PLPADLTAKLLDVGNNLNAKNDNVQMETSPSYHHRDDQLNNAPPAPLTKDFLAVLSTTPS
Sbjct: 754 PLPADLTAKLLDVGNNLNAKNDNVQMETSPSYHHRDDQLNNAPPAPLTKDFLAVLSTTPS 933
Query: 296 TPARNGGNGSTSSADHMRERSSGSSQSPNDDSDCQEDVRVKLPLQLFGSSPENDSPSKLP 355
TPARNGGNGSTSSADHMRERSSGSSQSPNDDSDCQEDVRVKLPLQLFGSSPENDSPSKLP
Sbjct: 934 TPARNGGNGSTSSADHMRERSSGSSQSPNDDSDCQEDVRVKLPLQLFGSSPENDSPSKLP 1113
Query: 356 SSRKYFSSESSNPVDERTPSSSPPVVEMNF 385
SSRKYFSSESSNPVDERTPSSSPPVVEMNF
Sbjct: 1114SSRKYFSSESSNPVDERTPSSSPPVVEMNF 1203
>TC80108 similar to GP|22045251|gb|AAL69483.2 putative SPL1-related protein
{Arabidopsis thaliana}, partial (42%)
Length = 1251
Score = 442 bits (1137), Expect = e-124
Identities = 219/223 (98%), Positives = 219/223 (98%), Gaps = 4/223 (1%)
Frame = +2
Query: 780 LSTGSVEMLKAIQLLNRAVKRKCTSMVDLLINYSITSKNDTSKKYVFPPNLEGPGGITPL 839
LSTGSVEMLKAIQLLNRAVKRKCTSMVDLLINYSITSKNDTSKKYVFPPNLEGPGGITPL
Sbjct: 5 LSTGSVEMLKAIQLLNRAVKRKCTSMVDLLINYSITSKNDTSKKYVFPPNLEGPGGITPL 184
Query: 840 HLAASTTDSEGVIDSLTNDPQE----CWETLADENGQTPHAYAMMRNNHSYNMLVARKCS 895
HLAASTTDSEGVIDSLTNDPQE CWETLADENGQTPHAYAMMRNNHSYNMLVARKCS
Sbjct: 185 HLAASTTDSEGVIDSLTNDPQEIGLKCWETLADENGQTPHAYAMMRNNHSYNMLVARKCS 364
Query: 896 DRQRSEVSVRIDNEIEHPSLGIELMQKRINQVKRVGDSCSKCAIAEVRAKRRFSGSRSWL 955
DRQRSEVSVRIDNEIEHPSLGIELMQKRINQVKRVGDSCSKCAIAEVRAKRRFSGSRSWL
Sbjct: 365 DRQRSEVSVRIDNEIEHPSLGIELMQKRINQVKRVGDSCSKCAIAEVRAKRRFSGSRSWL 544
Query: 956 HGPFIHSMLAVAAVCVCVCVLFRGTPYVGSVSPFRWENLNYGT 998
HGPFIHSMLAVAAVCVCVCVLFRGTPYVGSVSPFRWENLNYGT
Sbjct: 545 HGPFIHSMLAVAAVCVCVCVLFRGTPYVGSVSPFRWENLNYGT 673
>TC77807 similar to PIR|T52601|T52601 squamosa promoter binding protein 1
[imported] - Arabidopsis thaliana, partial (55%)
Length = 2923
Score = 252 bits (644), Expect(2) = 1e-71
Identities = 165/529 (31%), Positives = 271/529 (51%), Gaps = 30/529 (5%)
Frame = +1
Query: 500 PSDLESYIRPGCVVLSIYASMSSAAWVQLEENFLQRVDSLIHNSDSDFWRNGRFLVYSGS 559
P+D+ESYIRPGC+VL+IY + A W +L + + L+ SD FW+ G +
Sbjct: 1027 PTDIESYIRPGCIVLTIYLRQAEAVWEELCCDLTSSLIKLLDVSDDTFWKTGWVHIRVQH 1206
Query: 560 QLASHKDGR--IRMCKPWGTWRSPELISVSPLAIVGGQETSISLKGRNLSAPGTKIHCTG 617
Q+A +G+ I P+ + ++ +VSP+A+ + S+KG NL P T++ C
Sbjct: 1207 QMAFIFNGQVVIDTSLPFRSNNYSKIWTVSPIAVPASKRAQFSVKGVNLMRPATRLMCAL 1386
Query: 618 ADCYTSSEVIGSGDPGMVYDEIKLSGFEVQNTSPSVLGRCFIEVEN-GFKGNSFPVIIAN 676
Y E + +L + + P GR FIE+E+ G + FP I+A
Sbjct: 1387 EGKYLVCEDAHESTDQYSEELDELQCIQFSCSVPVSNGRGFIEIEDQGLSSSFFPFIVAE 1566
Query: 677 ASICKELRPLESEFDEEEKMCDAISEEHEHHFGRPKSRDEALHFLNELGWLFQRE----R 732
+C E+R LE + E ++ G+ K++ +A+ F++E+GWL R R
Sbjct: 1567 EDVCTEIRVLEPLLESSE------TDPDIEGTGKIKAKSQAMDFIHEMGWLLHRSQLKYR 1728
Query: 733 FSNVHEVPD-YSLDRFKFVLTFSVERNCCMLVKTLLDMLVDKHFEGEGLSTGSVEMLKAI 791
N++ D + L RF +++ FS++ + C +VK LL++L+D+ +G + L +
Sbjct: 1729 MVNLNSGVDLFPLQRFTWLMEFSMDHDWCAVVKKLLNLLLDETV-NKGDHPTLYQALSEM 1905
Query: 792 QLLNRAVKRKCTSMVDLLINYSITSKND------------TSKKYVFPPNLEGPGGITPL 839
LL+RAV+R +V+LL+ Y + +D + Y+F P+ GP G+TPL
Sbjct: 1906 GLLHRAVRRNSKQLVELLLRYVPDNTSDELGPEDKALVGGKNHSYLFRPDAVGPAGLTPL 2085
Query: 840 HLAASTTDSEGVIDSLTNDP----QECWETLADENGQTPHAYAMMRNNHSYNMLVARKCS 895
H+AA SE V+D+LTNDP E W+ D G TP YA +R +++Y LV +K +
Sbjct: 2086 HIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYTYIHLVQKKIN 2265
Query: 896 DRQRS-----EVSVRIDNEIEHPSLGIELMQKRINQVKRVGDSCSKCAIAEVRAKRRFSG 950
Q + E+ + ++P I + + V S C + + + R +
Sbjct: 2266 KTQGAAHVVVEIPSNMTESNKNPKQNESFTSLEIGKAE-VRRSQGNCKLCDTKISCRTAV 2442
Query: 951 SRSWLHGPFIHSMLAVAAVCVCVCVLFRGTPYV-GSVSPFRWENLNYGT 998
RS ++ P + SM+A+AAVCVCV +LF+ +P V PFRWE+L++GT
Sbjct: 2443 GRSMVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYMFRPFRWESLDFGT 2589
Score = 147 bits (372), Expect = 2e-35
Identities = 73/133 (54%), Positives = 93/133 (69%)
Frame = +3
Query: 103 MCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGKR 162
+CQV++C DLS+ KDYHRRHKVCE HSKAS+AL+GN MQRFCQQCSRFH L EFDEGKR
Sbjct: 15 VCQVEDCGADLSRGKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHILEEFDEGKR 194
Query: 163 SCRRRLAGHNRRRRKTQPDEVAVGGSPPLNQVAANLEIFNLLTAIADGSQGKFEERRSQV 222
SCRRRLAGHN+RRRKT E GSP + ++ + +LL +++ +R Q
Sbjct: 195 SCRRRLAGHNKRRRKTN-QEAVPNGSPTNDDQTSSYLLISLLKILSN----MHSDRSDQP 359
Query: 223 PDKEQLVQILNRI 235
D++ L +L +
Sbjct: 360 TDQDLLTHLLRSL 398
Score = 37.0 bits (84), Expect(2) = 1e-71
Identities = 17/31 (54%), Positives = 20/31 (63%)
Frame = +2
Query: 461 LNSDTQDRTGRIMFKLFDKHPSHFPGTLRTQ 491
L + Q RT RI+FKLF K P+ FP LR Q
Sbjct: 908 LAEEAQSRTDRIVFKLFGKEPNEFPLVLRAQ 1000
>TC88329 similar to PIR|T47827|T47827 squamosa promoter binding protein-like
12 [imported] - Arabidopsis thaliana, partial (19%)
Length = 1277
Score = 168 bits (426), Expect = 8e-42
Identities = 105/321 (32%), Positives = 179/321 (55%), Gaps = 31/321 (9%)
Frame = +3
Query: 709 GRPKSRDEALHFLNELGWLFQRERFSNVHEVPD----YSLDRFKFVLTFSVERNCCMLVK 764
G+ +++++A+ F++E+GWL R + + + + LDRFK+++ FSV+ + C +VK
Sbjct: 45 GKIQAKNQAMDFIHEMGWLLHRRQIKSSVRLNSSMDLFPLDRFKWLMEFSVDHDWCAVVK 224
Query: 765 TLLDMLVDKHFEGEGLSTGSVEMLKAIQLLNRAVKRKCTSMVDLLINY---SITSK---- 817
LL++++D G T L + LL+RAV+R +V+LL+ + +I++K
Sbjct: 225 KLLNLMLDGTVS-TGDHTSLYLALSELGLLHRAVRRNSRQLVELLLRFVPQNISNKLGPE 401
Query: 818 -----NDTSKKYVFPPNLEGPGGITPLHLAASTTDSEGVIDSLTNDP----QECWETLAD 868
N ++ ++F P+ GP G+TPLH+AA SE V+D+LTNDP E W + D
Sbjct: 402 DKALVNGENQNFLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWNSARD 581
Query: 869 ENGQTPHAYAMMRNNHSYNMLVARKCSDRQRSEVSVRIDNEIEHPSLGIELMQKRIN--- 925
G TP YA +R +++Y LV +K + +S+ + +I + QK+
Sbjct: 582 STGSTPEDYARLRGHYTYIHLVQKKIN---KSQGGAHVVVDIPSIPTKFDTSQKKDESCT 752
Query: 926 -------QVKRVGDSCSKCAIAEVRAKRRFSGSRSWLHGPFIHSMLAVAAVCVCVCVLFR 978
+VK+V C C + + R + +S+++ P + SM+A+AAVCVCV +LF+
Sbjct: 753 TFQIGNAEVKKVRKDCKLC---DHKLSCRTAVRKSFVYRPAMLSMVAIAAVCVCVALLFK 923
Query: 979 GTPYVGSV-SPFRWENLNYGT 998
+P V + PFRWE+L+YGT
Sbjct: 924 SSPEVLYIFRPFRWESLDYGT 986
>BG455868 similar to SP|Q38741|SBP1_ Squamosa-promoter binding protein 1.
[Garden snapdragon] {Antirrhinum majus}, partial (70%)
Length = 656
Score = 124 bits (310), Expect = 2e-28
Identities = 58/88 (65%), Positives = 64/88 (71%), Gaps = 1/88 (1%)
Frame = +1
Query: 92 RSGSPTSASY-PMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSR 150
+ GS S P CQVDNC DLS AK YH+RHKVCE HSKA L+ QRFCQQCSR
Sbjct: 226 KKGSKAGGSVTPSCQVDNCNADLSAAKQYHKRHKVCENHSKAHSVLISELQQRFCQQCSR 405
Query: 151 FHPLVEFDEGKRSCRRRLAGHNRRRRKT 178
FH + EFD+ KRSCRRRLAGHN RRRK+
Sbjct: 406 FHEVSEFDDLKRSCRRRLAGHNERRRKS 489
>TC92499 homologue to PIR|T52594|T52594 squamosa promoter binding protein 8
[imported] - Arabidopsis thaliana, partial (22%)
Length = 805
Score = 122 bits (305), Expect = 9e-28
Identities = 55/78 (70%), Positives = 60/78 (76%)
Frame = +1
Query: 102 PMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGK 161
P CQ + C DLS+AK YHRRHKVCE HSKA+ + QRFCQQCSRFH L EFD GK
Sbjct: 16 PRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRFHLLSEFDNGK 195
Query: 162 RSCRRRLAGHNRRRRKTQ 179
RSCR+RLA HNRRRRKTQ
Sbjct: 196 RSCRKRLADHNRRRRKTQ 249
>AW691786 similar to PIR|T52298|T52 squamosa promoter binding protein-homolog
4 [imported] - garden snapdragon (fragment), partial
(42%)
Length = 649
Score = 118 bits (296), Expect = 1e-26
Identities = 54/85 (63%), Positives = 61/85 (71%)
Frame = +3
Query: 94 GSPTSASYPMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHP 153
G S+ P CQV+ CK DL+ AK Y+ RHKVC HSK+ + QRFCQQCSRFH
Sbjct: 186 GQFNSSQPPRCQVEGCKLDLTDAKAYYSRHKVCSMHSKSPTVTVSGLQQRFCQQCSRFHQ 365
Query: 154 LVEFDEGKRSCRRRLAGHNRRRRKT 178
L EFD+GKRSCRRRLAGHN RRRKT
Sbjct: 366 LAEFDQGKRSCRRRLAGHNERRRKT 440
>CA916954 similar to PIR|T52592|T525 squamosa-promoter binding protein 6
[imported] - Arabidopsis thaliana, partial (16%)
Length = 775
Score = 103 bits (256), Expect = 4e-22
Identities = 50/84 (59%), Positives = 58/84 (68%)
Frame = +3
Query: 87 PNKRIRSGSPTSASYPMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQ 146
P KR+R S T+ CQV C +DLS KDYH+RHKVCE HSK ++ QRFCQ
Sbjct: 534 PPKRVRVHSMTA----YCQVYGCNKDLSSCKDYHKRHKVCEVHSKTPIVIVNGIEQRFCQ 701
Query: 147 QCSRFHPLVEFDEGKRSCRRRLAG 170
QCSRFH L EFD+G RSCR+RLAG
Sbjct: 702 QCSRFHLLSEFDDG*RSCRKRLAG 773
>BG582086 similar to PIR|T52603|T526 squamosa promoter binding protein 2
[imported] - Arabidopsis thaliana, partial (18%)
Length = 805
Score = 101 bits (251), Expect = 2e-21
Identities = 47/110 (42%), Positives = 68/110 (61%)
Frame = +1
Query: 68 PQQVEESLNLNLGSTGLVRPNKRIRSGSPTSASYPMCQVDNCKEDLSKAKDYHRRHKVCE 127
P+ ++L+ + + K+ +S P CQV+ C +LS AKDYH + +VCE
Sbjct: 106 PESDSKNLSFSRDLMSSLILEKKCKSNGQNLQCPPHCQVEGCGLNLSSAKDYHCKRRVCE 285
Query: 128 AHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGKRSCRRRLAGHNRRRRK 177
+H+K+ ++ +RFCQQCSRFH L EFD K+SCRR+L+ HN RRRK
Sbjct: 286 SHAKSPMVVIDGLERRFCQQCSRFHDLFEFDGKKKSCRRQLSNHNARRRK 435
>TC81138 similar to PIR|T52606|T52606 squamosa promoter binding protein 7
[imported] - Arabidopsis thaliana (fragment), partial
(32%)
Length = 743
Score = 100 bits (248), Expect = 4e-21
Identities = 72/206 (34%), Positives = 103/206 (49%), Gaps = 9/206 (4%)
Frame = +2
Query: 1 MEKVAPPLLP-LHPPMLSSHQFYDSSNTKKRDLLSSYD-----VVHIPNDNWNPKEWNWD 54
ME + P+LP + PP D S+ L +D + +PN N P+E
Sbjct: 122 MESKSQPILPPMDPPE-------DLSSVWDLSYLLDFDDDIPQLPPLPNPNPTPEENERI 280
Query: 55 SIRFMTAKSTTVEPQQVE---ESLNLNLGSTGLVRPNKRIRSGSPTSASYPMCQVDNCKE 111
R + QV L+ L GL P K+ R+ + +A+ CQV C+
Sbjct: 281 RKRDPRLTCSNFLAGQVPCACPELDALLEDNGL--PGKK-RARTARAAASARCQVPGCEV 451
Query: 112 DLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLVEFDEGKRSCRRRLAGH 171
D+S+ K YHRRH+VC + A+ +L ++R+CQQC +FH L +FDEGKRSCRR+L H
Sbjct: 452 DISELKGYHRRHRVCLRCANAATVVLDGDVKRYCQQCGKFHVLSDFDEGKRSCRRKLERH 631
Query: 172 NRRRRKTQPDEVAVGGSPPLNQVAAN 197
N RRR+ + AVG + V N
Sbjct: 632 NTRRRRKAVNS-AVGVDNEVQTVTQN 706
>TC91858 similar to PIR|T52592|T52592 squamosa-promoter binding protein 6
[imported] - Arabidopsis thaliana, partial (19%)
Length = 1130
Score = 97.4 bits (241), Expect = 2e-20
Identities = 46/81 (56%), Positives = 55/81 (67%)
Frame = +3
Query: 79 LGSTGLVRPNKRIRSGSPTSASYPMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLG 138
L S+G P+KR+RS S + CQV C +DLS KDYH+RHKVCE HSK SK ++
Sbjct: 891 LSSSGSSTPSKRVRS-SAIHSQIAYCQVYGCNKDLSSCKDYHKRHKVCEVHSKTSKVIVN 1067
Query: 139 NQMQRFCQQCSRFHPLVEFDE 159
QRFCQQCSRFH L EFD+
Sbjct: 1068GIEQRFCQQCSRFHLLAEFDD 1130
>BG587629 similar to PIR|T52605|T526 squamosa promoter binding protein 7
[imported] - Arabidopsis thaliana, partial (9%)
Length = 631
Score = 40.8 bits (94), Expect = 0.003
Identities = 37/134 (27%), Positives = 54/134 (39%), Gaps = 7/134 (5%)
Frame = +2
Query: 565 KDGRIRMCKPWGTWRSPELISVSPLAIVGGQETSISLKGRNLSAPGTKIHCTGADCYTSS 624
KDG I + K ++P L + P G+ G NL P ++ + Y
Sbjct: 41 KDG-ISVTKVEVNMQAPRLHYIHPTCFEAGKPMEFFACGSNLLQPKFRLLVSFYGKYLKC 217
Query: 625 EVIGSGDPGMVYDEI------KLSGFEVQNTSPSVLGRCFIEVEN-GFKGNSFPVIIANA 677
E D I +L V + ++LG FIEVEN N PV+I +
Sbjct: 218 EYCAPSPHNSAEDNISCAFDNQLYKICVPHIEENLLGPAFIEVENESGLSNFIPVLIGDK 397
Query: 678 SICKELRPLESEFD 691
IC EL+ L+ + D
Sbjct: 398 EICTELKILQQKLD 439
>BQ751179 similar to GP|18025374|gb| MC8 {Micrococcus sp. 28}, partial (4%)
Length = 559
Score = 35.4 bits (80), Expect = 0.11
Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 5/138 (3%)
Frame = +1
Query: 108 NCKEDLSKAKDYHRRHKVCEAHSKASKALLG-----NQMQRFCQQCSRFHPLVEFDEGKR 162
N + L + HR H AH L+ N +R + +R P G+R
Sbjct: 91 NSRRSLPSSTQQHRAHNSRNAHEHHHDGLIALPILRNLSRRGVSRLARRRPTTR--AGRR 264
Query: 163 SCRRRLAGHNRRRRKTQPDEVAVGGSPPLNQVAANLEIFNLLTAIADGSQGKFEERRSQV 222
RR LAGH RRRR+ + + P +V L +L + G EER +Q
Sbjct: 265 R-RRYLAGHARRRRQRRLAGAKLNDVGP-RRVEVGLRHADLHVGLVVNDVGAAEERVAQ- 435
Query: 223 PDKEQLVQILNRIPLPAD 240
K + V R+ L A+
Sbjct: 436 QRKVRAVDAEERVALDAE 489
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 33.5 bits (75), Expect = 0.42
Identities = 30/91 (32%), Positives = 39/91 (41%), Gaps = 3/91 (3%)
Frame = -1
Query: 303 NGSTSSADHMRERSSGSSQSPNDDSDCQEDVRVKLPLQLFGSSPENDSPSKLPSSRKYFS 362
+ S+SS+ SS SS SP+ S LP S + SPS PSS + S
Sbjct: 553 SSSSSSSSSSSSPSSSSSSSPSSSSSSPSS----LPPAPLASGSSSGSPSSSPSSPE*SS 386
Query: 363 ---SESSNPVDERTPSSSPPVVEMNFGLQGG 390
S SS+ + SSS V + F L G
Sbjct: 385 SSPSSSSSCTSSSSSSSSSSSVSLLFSL*AG 293
>TC89496 similar to GP|4585899|gb|AAD25561.1| unknown protein {Arabidopsis
thaliana}, partial (7%)
Length = 811
Score = 33.5 bits (75), Expect = 0.42
Identities = 39/164 (23%), Positives = 66/164 (39%), Gaps = 7/164 (4%)
Frame = +1
Query: 311 HMRERSSGSSQSPNDDSDCQEDVRVKLP----LQLFGSSPENDSPSKLPSSRKY--FSSE 364
+M+ SS SS D D++ K+ ++L SPS +PSS K S +
Sbjct: 277 NMKLSSSSSSHQHQDGKTKVSDIKKKMKKSKSIKLSDLEALQSSPSSVPSSTKAAPASPQ 456
Query: 365 SSNPVDERTPSSSPPVVEMNFGLQGGIRGFNSNCISTGFGGNAN-KETSQSHSCTTIPLD 423
+P+ TP SP ++ F+ + T G + N K +S S + P
Sbjct: 457 KQHPLVRTTPDGSPNYMKPTSSSHAKKELFSVSLRKTQSGSDFNRKYSSDSKALCKKPTK 636
Query: 424 LFKGSKSNNMIQQSSSVQSVPFKAGYASSGSDYSPPSLNSDTQD 467
S S ++++ + S FKA S + + +S +D
Sbjct: 637 ALIRSSSLSLVRTLTKTTS--FKASRTSCPRKSTRATCSSTLKD 762
>TC93151 homologue to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
thaliana}, partial (4%)
Length = 657
Score = 32.7 bits (73), Expect = 0.71
Identities = 32/135 (23%), Positives = 54/135 (39%), Gaps = 7/135 (5%)
Frame = +3
Query: 287 LAVLSTTPSTPARNGGNGSTSSADHMRERSSGSSQSP-------NDDSDCQEDVRVKLPL 339
LA +S P + + + S++SA GSS SP +
Sbjct: 105 LATMSGFPFGSSSSTQSSSSTSAFSFGSSPFGSSPSPFSTTTNPTSTATAPSSFNFGSSS 284
Query: 340 QLFGSSPENDSPSKLPSSRKYFSSESSNPVDERTPSSSPPVVEMNFGLQGGIRGFNSNCI 399
LFG+SP + +P+ + + S+ + +P TPS+ G + G S+
Sbjct: 285 SLFGASPASSTPAAASAPSIFGSATAGSPFGGGTPST-----------PGNLFGGASSAS 431
Query: 400 STGFGGNANKETSQS 414
+ FGG A+ T+ S
Sbjct: 432 TPLFGGAASGSTTAS 476
>TC76676 homologue to SP|P20363|TBA3_ARATH Tubulin alpha-3/alpha-5 chain.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (98%)
Length = 1656
Score = 32.3 bits (72), Expect = 0.93
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Frame = -2
Query: 465 TQDRTGRIMFKLFDKHP-------SHFPGTLRTQIYNWLSTRPSDLESYIRPGCVVLSIY 517
TQ RTG + ++ P S FP T++TQIYN+L+ S+
Sbjct: 521 TQTRTGSTTNGVENQKPLKTGTVISQFPNTIQTQIYNFLAN----------------SVV 390
Query: 518 ASMSSAAWVQLEENFLQRVDSLIHNSDSDFWRNGRFLVY 556
+S + V + L RV+ L + ++F +G F +Y
Sbjct: 389 SSSKIVSGVFFAGDELFRVEELSVGTGTNFIDDGGFKIY 273
>TC88692 weakly similar to GP|13786462|gb|AAK39587.1 putative sphingosine
kinase {Oryza sativa}, partial (8%)
Length = 1064
Score = 32.3 bits (72), Expect = 0.93
Identities = 21/62 (33%), Positives = 31/62 (49%)
Frame = +1
Query: 313 RERSSGSSQSPNDDSDCQEDVRVKLPLQLFGSSPENDSPSKLPSSRKYFSSESSNPVDER 372
R S SP+DD DC + ++ + + L SSP+N S+LP R+ +PV R
Sbjct: 484 RHSDSHHLNSPSDD*DCVLNYQLLVNILLLSSSPKNAVNSRLP--RRTVQKPFVHPVIIR 657
Query: 373 TP 374
P
Sbjct: 658 MP 663
>TC92982 similar to GP|23332794|gb|AAN27343.1 Sequence 13 from patent US
6440698, partial (1%)
Length = 795
Score = 32.0 bits (71), Expect = 1.2
Identities = 36/157 (22%), Positives = 53/157 (32%), Gaps = 10/157 (6%)
Frame = -1
Query: 270 RDDQLNNAPPAPLTKDFLAVLSTTPSTPARNGGNGSTSSADHMRERSSGSSQSPNDDSDC 329
R+ NNA P + STT A SA + RSS + S
Sbjct: 771 RNTSYNNAASQPAASSYSQPSSTTQQQTASLQSFNMRVSASASQSRSSSTKYSQQQAQQA 592
Query: 330 QEDVRVKLP--------LQLFGSSPENDSPSKLPSSRKYFSSESSNPVDERTPSSSPPVV 381
Q+ + + P Q +GS P PS P ++ S+ P + +S
Sbjct: 591 QQQQQQQQPQQTQQTQQTQSYGSYPPQAQPSH-PEQHSWYGFGSNAPSSFTSGGNS---- 427
Query: 382 EMNFGLQGGIRGFNSNCISTGFGGNANKET--SQSHS 416
GG +S + G G N+ + Q HS
Sbjct: 426 ------AGGYSARSSTTANYGTGANSANQAYQQQQHS 334
>TC85149 similar to PIR|JC4780|JC4780 peroxidase (EC 1.11.1.7) 1B precursor
- alfalfa, partial (95%)
Length = 1274
Score = 32.0 bits (71), Expect = 1.2
Identities = 23/70 (32%), Positives = 31/70 (43%), Gaps = 2/70 (2%)
Frame = +2
Query: 775 FEGEGLSTGSVEMLKAIQLLNRAVKRKCTSMVDLLINYSITSKNDTSKKYVFPPNLEG-- 832
F +GLST + L RA +CT + D L N+S T K D + + L
Sbjct: 554 FAAQGLSTTDLVALSGAHTFGRA---RCTFITDRLYNFSSTGKPDPTLNTTYLQELRKIC 724
Query: 833 PGGITPLHLA 842
P G P +LA
Sbjct: 725 PNGGPPNNLA 754
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.316 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,799,091
Number of Sequences: 36976
Number of extensions: 514469
Number of successful extensions: 3225
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 3116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3200
length of query: 998
length of database: 9,014,727
effective HSP length: 106
effective length of query: 892
effective length of database: 5,095,271
effective search space: 4544981732
effective search space used: 4544981732
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Medicago: description of AC140774.7