BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140549.7 + phase: 0
(985 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF648394 206 e-101
BG451092 73 1e-25
TC88749 84 3e-24
TC80591 73 6e-13
TC82456 weakly similar to GP|18057159|gb|AAL58182.1 putative far... 64 3e-10
AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~... 61 2e-09
TC90694 55 1e-07
BG449141 similar to GP|15983442|gb At1g10240/F14N23_12 {Arabidop... 52 1e-06
BG588495 47 4e-05
TC89654 weakly similar to PIR|T05644|T05644 hypothetical protein... 42 9e-04
TC79278 similar to GP|21537229|gb|AAM61570.1 unknown {Arabidopsi... 40 0.003
TC83834 similar to PIR|G96565|G96565 F6D8.26 [imported] - Arabid... 40 0.003
BG646905 weakly similar to GP|20804419|dbj contains EST C73272(E... 40 0.006
TC80063 similar to GP|6513925|gb|AAF14829.1| unknown protein {Ar... 39 0.013
TC81753 similar to PIR|G96752|G96752 unknown protein F28P22.2 [i... 38 0.017
BG450209 similar to GP|10177604|db gb|AAD41995.1~gene_id:K21H1.1... 38 0.022
TC77547 similar to PIR|T48354|T48354 hypothetical protein F12E4.... 36 0.064
TC90952 similar to GP|15724316|gb|AAL06551.1 AT4g34150/F28A23_90... 34 0.24
TC85163 similar to SP|P36212|R123_ARATH 50S ribosomal protein L1... 33 0.41
TC83787 similar to GP|9757890|dbj|BAB08397.1 phosphoribosylanthr... 33 0.54
>BF648394
Length = 650
Score = 206 bits (524), Expect(2) = e-101
Identities = 102/119 (85%), Positives = 107/119 (89%)
Frame = -3
Query: 471 VESAHALLKKYLDNSVGDLGTCWEKIHHMLLLQFTAIQTSFGQNVCVLEHRFKDVTLYSG 530
VESA LLKKYLDNSVGDLGTCWEKIH MLLLQF AIQT+FGQ+V VLEHRFK VTLYSG
Sbjct: 648 VESAXDLLKKYLDNSVGDLGTCWEKIHDMLLLQFIAIQTTFGQSVSVLEHRFKYVTLYSG 469
Query: 531 LGGHVSRNALDNIALEEKRCRETLCMDNDICGCVQRTSYGLPCACEIATKLLQEKPILL 589
+GGHVSR ALDNIALEE CR+TLCM NDI GCVQRTSYGLPC CEIATKLL+EKPILL
Sbjct: 468 IGGHVSRYALDNIALEETHCRKTLCMYNDI*GCVQRTSYGLPCPCEIATKLLEEKPILL 292
Score = 183 bits (464), Expect(2) = e-101
Identities = 88/98 (89%), Positives = 93/98 (94%)
Frame = -2
Query: 589 LDEIYHHWLRLSMGEQSNEDAFCVEVELKAIVERLKKLPFQMKLEVKEGLRQLAFPETTL 648
+DEIYHHWL+L MGE+SNE FCVEVELKAIVE LKKLPFQMK+EVKEGLRQL FPETT+
Sbjct: 295 IDEIYHHWLKLRMGEESNEVGFCVEVELKAIVEHLKKLPFQMKVEVKEGLRQLTFPETTM 116
Query: 649 MSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEV 686
MSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEV
Sbjct: 115 MSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEV 2
>BG451092
Length = 663
Score = 72.8 bits (177), Expect(2) = 1e-25
Identities = 37/74 (50%), Positives = 52/74 (70%)
Frame = -3
Query: 896 CPLPPLSTEWHNHKKEDAVTWEDEYLDRHDLFRKLMAIESGNKPCKPQKESNKAAPILLD 955
CPLPP STE HK +A + + E+LD+HD F++L+ E G+KP P+ ES A+P L D
Sbjct: 259 CPLPPSSTE*KLHK--EAASSKFEFLDQHDHFQRLVKFERGDKPSSPK*ESK*ASPNLCD 86
Query: 956 TPEKPKQQFEVIAK 969
+PEK ++FEVIA+
Sbjct: 85 SPEKENEEFEVIAE 44
Score = 63.2 bits (152), Expect(2) = 1e-25
Identities = 30/59 (50%), Positives = 40/59 (66%)
Frame = -1
Query: 829 WLTFPDMGHIVANYYKMCVVVLTNLEVGKSESFFPLRGPPPPGNQKTPILCLGAIPNHF 887
WLT PDM HIVA YY VV +T++E+ S++F+ +RG PP N K+ I+CLG P F
Sbjct: 468 WLTLPDMSHIVATYYNRLVVEITSVEIRISDTFYLIRGRPPI-NPKSRIMCLGFNPKSF 295
Score = 48.5 bits (114), Expect(2) = 3e-07
Identities = 36/125 (28%), Positives = 58/125 (45%), Gaps = 8/125 (6%)
Frame = -2
Query: 787 QELMDHRDDYVEVFAGEDRYNYILNGLHPPANTK--------TCAHLVDKWLTFPDMGHI 838
+E+ +HR+ Y+ ++ GE+ YNYILN LHPP N T L+ L + + +
Sbjct: 569 REVKEHRNHYMRIYGGENCYNYILN*LHPP*NGSG*HCRI*VTSLQLITIGLWWR*LA-L 393
Query: 839 VANYYKMCVVVLTNLEVGKSESFFPLRGPPPPGNQKTPILCLGAIPNHFVLISLKNGCPL 898
+ + + +L + +K LG IPNHFVL+ LK+ PL
Sbjct: 392 KLEFRILFT*LEADLRL----------------TRKAASCVLGLIPNHFVLLVLKDDYPL 261
Query: 899 PPLST 903
P ++
Sbjct: 260 LPTTS 246
Score = 25.0 bits (53), Expect(2) = 3e-07
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3
Query: 767 IAEFMGLTEKNHLMIR 782
IA+ MGLTE+ H+M+R
Sbjct: 622 IAQTMGLTEEIHVMVR 575
>TC88749
Length = 1221
Score = 83.6 bits (205), Expect(2) = 3e-24
Identities = 43/92 (46%), Positives = 61/92 (65%)
Frame = +3
Query: 887 FVLISLKNGCPLPPLSTEWHNHKKEDAVTWEDEYLDRHDLFRKLMAIESGNKPCKPQKES 946
FV +++GCP PP S+E HK+++A +WE ++LD+ FR LM I+ KES
Sbjct: 858 FVFFPIRDGCPPPPSSSELKLHKRQEASSWEFDFLDQETWFRDLMNIKK-EIHSHH*KES 1034
Query: 947 NKAAPILLDTPEKPKQQFEVIAKDEEDSMSLD 978
N+ PIL D PEK K+QF+VIA+DE+D + LD
Sbjct: 1035NRVNPILCDIPEKVKEQFKVIAEDEDD*IMLD 1130
Score = 69.3 bits (168), Expect = 7e-12
Identities = 33/63 (52%), Positives = 46/63 (72%)
Frame = +2
Query: 68 DDVKSKNRDELLEWVRRQANKAGFTIVTQRSSLINPMFRLVCERSGSHIVPKKKPKHANT 127
+ V K+++++L +RRQAN+AGFT+ +RSS+ NPM L+CERSG H V KK+ KH T
Sbjct: 539 NQVTWKDKEDMLSSIRRQANRAGFTVGIKRSSIQNPMLELMCERSGDHKVSKKRLKHEAT 718
Query: 128 GSR 130
SR
Sbjct: 719 *SR 727
Score = 47.8 bits (112), Expect(2) = 3e-24
Identities = 23/36 (63%), Positives = 25/36 (68%), Gaps = 1/36 (2%)
Frame = +2
Query: 829 WLTFPDMGHIVANYYKMCVVVLTNLEVGKSE-SFFP 863
WLT PDMGHI+ Y M VV LTN E+G SE FFP
Sbjct: 764 WLTLPDMGHIIVTYCNMVVVELTNHEIGISEICFFP 871
>TC80591
Length = 734
Score = 72.8 bits (177), Expect = 6e-13
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = +1
Query: 1 MVKNAKDVPGETNENFVENSGDVKPPNFEAKTNIDEASVHVEASKYVGG 49
MV+NA+DV GET + FV SGDVKPP EAK+NID A VHVEASKYVGG
Sbjct: 583 MVENAEDVLGETKQYFVRISGDVKPPKVEAKSNIDGAFVHVEASKYVGG 729
>TC82456 weakly similar to GP|18057159|gb|AAL58182.1 putative far-red
impaired response protein {Oryza sativa}, partial (7%)
Length = 1244
Score = 63.9 bits (154), Expect = 3e-10
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Frame = +2
Query: 226 RGDKKPLQFLISKLEEHNYTYYSRTQLESN-TIEDIFWAHPTSIKLFNNFPTVLVMDSTY 284
RGD + ++++ N +Y ++ I+++FWA + F V+ +D+TY
Sbjct: 710 RGDVDAIHSFFHRMQKQNSQFYCAMDMDDKRNIQNLFWADARCRAAYEYFGEVITLDTTY 889
Query: 285 KTNMYRMPMFEVVGVTSTDLTYSVGFGFMTHEKEENFVWVLTMLRKLLSSKMNMHKVIVT 344
T+ Y +P+ VGV T +G +++ + W+ T R L + I+T
Sbjct: 890 LTSKYDLPLVPFVGVNHHGQTILLGCAILSNLDAKTLTWLFT--RWLECMHGHAPNGIIT 1063
Query: 345 DRDMSLMKAVAHVFPESYALNCFFHVQANVKQ 376
+ D ++ A+ FP++ C +H+ V +
Sbjct: 1064EEDKAMKNAIEVAFPKARHRWCLWHIMKKVPE 1159
>AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~similar to
Arabidopsis thaliana F20D10.300, partial (11%)
Length = 662
Score = 60.8 bits (146), Expect = 2e-09
Identities = 48/205 (23%), Positives = 90/205 (43%)
Frame = +1
Query: 277 VLVMDSTYKTNMYRMPMFEVVGVTSTDLTYSVGFGFMTHEKEENFVWVLTMLRKLLSSKM 336
VL D+TYK N Y P+ G T G + E E++ WVL + + +K
Sbjct: 4 VLAFDTTYKKNKYNYPLCIFSGCNHHSQTIIFGVALLEDETIESYKWVLNRFLECMENKF 183
Query: 337 NMHKVIVTDRDMSLMKAVAHVFPESYALNCFFHVQANVKQRCVLNCKYPLGFKKDGKEVS 396
K +VTD D S+ +A+ VFP++ C +H+ N ++ + + GF+ K +
Sbjct: 184 P--KAVVTDGDGSMREAIKQVFPDASHRLCAWHLHKNAQEN-IKKTPFLEGFR---KAMY 345
Query: 397 NRDVVKKIMNAWKAMVESPNQQLYANALVEFKDSCSDFPIFVDYAMTTLDEVKDKIVRAW 456
+ ++ + W +++ +L NA V + + ++ ++DK
Sbjct: 346 SNFTPEQFEDFWSELIQ--KNELEGNAWV--------IKTYANKSLWATAYLRDKFFGR- 492
Query: 457 TDHVLHLGCRTTNRVESAHALLKKY 481
RTT++ E+ +A++K Y
Sbjct: 493 --------IRTTSQCEAINAIVKTY 543
>TC90694
Length = 588
Score = 55.1 bits (131), Expect = 1e-07
Identities = 27/52 (51%), Positives = 35/52 (66%)
Frame = +2
Query: 863 PLRGPPPPGNQKTPILCLGAIPNHFVLISLKNGCPLPPLSTEWHNHKKEDAV 914
P+RG PP N T ++CLG I HFV + LK+GC +PP T+ HKKE+AV
Sbjct: 188 PVRGQPPL-NSNTYVICLGLI*EHFVHVFLKDGCRIPPSCTK*KLHKKEEAV 340
>BG449141 similar to GP|15983442|gb At1g10240/F14N23_12 {Arabidopsis
thaliana}, partial (33%)
Length = 690
Score = 51.6 bits (122), Expect = 1e-06
Identities = 28/119 (23%), Positives = 62/119 (51%)
Frame = +3
Query: 254 SNTIEDIFWAHPTSIKLFNNFPTVLVMDSTYKTNMYRMPMFEVVGVTSTDLTYSVGFGFM 313
+N +E+I W++ +SI+L++ F +V D+T++ + MP+ VG+ + + G +
Sbjct: 312 NNRLENIAWSYASSIQLYDIFGDAVVFDTTHRLTAFDMPLGLWVGINNYGMPCFFGCVLL 491
Query: 314 THEKEENFVWVLTMLRKLLSSKMNMHKVIVTDRDMSLMKAVAHVFPESYALNCFFHVQA 372
E +F W + ++ K + I+TD+++ L +A++ P + C + + A
Sbjct: 492 RDETVRSFSWAIKAFLGFMNGK--APQTILTDQNICLKEALSAEMPMTKHAFCIWMIVA 662
>BG588495
Length = 540
Score = 47.0 bits (110), Expect = 4e-05
Identities = 22/31 (70%), Positives = 25/31 (79%)
Frame = +3
Query: 70 VKSKNRDELLEWVRRQANKAGFTIVTQRSSL 100
VKSK+RDELLEW R QANKAGFTI ++ L
Sbjct: 12 VKSKDRDELLEWTRHQANKAGFTIDDLKAQL 104
>TC89654 weakly similar to PIR|T05644|T05644 hypothetical protein F20D10.290
- Arabidopsis thaliana, partial (65%)
Length = 1358
Score = 42.4 bits (98), Expect = 9e-04
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 227 GDKKPLQFLISKLEEHNYTYYSRTQLESNTIEDIFWAHPTSIKLFNNFPTVLVMDSTYKT 286
G + L +L E++ +Y+ N +IFWA T ++ F ++ D+TYKT
Sbjct: 119 GGHQVLDYLKRMRAENHAFFYAVQSDVDNAGGNIFWADETCRTNYSYFGDTVIFDTTYKT 298
Query: 287 NMYRMPMFEVVG 298
N YR+P G
Sbjct: 299 NQYRVPFASFTG 334
>TC79278 similar to GP|21537229|gb|AAM61570.1 unknown {Arabidopsis
thaliana}, partial (87%)
Length = 1134
Score = 40.4 bits (93), Expect = 0.003
Identities = 31/130 (23%), Positives = 55/130 (41%), Gaps = 2/130 (1%)
Frame = +3
Query: 669 RSKGKITSTSRIPSSW--EVVDSQNPDSQPSPSPTTSSYKRKKGARLGKTSLSPLPPPTR 726
R G +S+S + SS+ + D Q + + T + R+ G RL P P
Sbjct: 216 RRNGSGSSSSSLGSSFHEDTEDDQTIANMLAEDETLHAGSRQLGKRLSHLDSIPHAPRVN 395
Query: 727 YPKPKAIPVMRPIDYMPRFMVPFIEKVVDVIGDGHCGFRAIAEFMGLTEKNHLMIRTHLI 786
P + + +V + + + GDG+C FRAIA+ + H +R ++
Sbjct: 396 GEIPDVNDATLDHETLSERLVTYGLSELQMEGDGNCQFRAIADQLFQNPDYHKYVRRQVV 575
Query: 787 QELMDHRDDY 796
++L H+ Y
Sbjct: 576 KQLKHHKKLY 605
>TC83834 similar to PIR|G96565|G96565 F6D8.26 [imported] - Arabidopsis
thaliana, partial (24%)
Length = 1032
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/196 (17%), Positives = 78/196 (39%), Gaps = 2/196 (1%)
Frame = +3
Query: 131 KCGCLFMISGYQSKQTKEWGLNILNGVHNHPMEPALEGHILAGRLKEDDKKIVRDLTKSK 190
+ GC MI + +++ W + + HNH + + I L D + K+
Sbjct: 414 RTGCPAMIR-MKLVESQRWRICEVTLEHNHVLGAKIHKSIKKNSLPSSDAE-----GKTI 575
Query: 191 MLPRNILIHLK-NQRPHCMTNVKQVYNERQQIWKANRGDKKPLQFLISKLEEHNYTYYSR 249
+ ++I + N + + +++ +GD + + + +++ N ++
Sbjct: 576 KVYHALVIDTEGNDNLNSNARDDRAFSKYSNKLNLRKGDTQAIYNFLCRMQLTNPNFFYL 755
Query: 250 TQL-ESNTIEDIFWAHPTSIKLFNNFPTVLVMDSTYKTNMYRMPMFEVVGVTSTDLTYSV 308
+ + + W S F V+ D+TY N Y +P+ +VG+ + +
Sbjct: 756 MDFNDEGHLRNALWVDAKSRAACGYFSDVIYFDNTYLVNKYEIPLVALVGINHHGQSVLL 935
Query: 309 GFGFMTHEKEENFVWV 324
G G + E E++ W+
Sbjct: 936 GCGLLAGEIIESYKWL 983
>BG646905 weakly similar to GP|20804419|dbj contains EST
C73272(E3606)~similar to Arabidopsis thaliana chromosome
5 MZF18.9~unknown protein, partial (10%)
Length = 735
Score = 39.7 bits (91), Expect = 0.006
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +2
Query: 709 KGARLGKTSLSPLPPPTRYPKPKAIPVMR--PIDYMPRFMVPFIEK 752
K +G S +P+P PT PKP + ++ +D+MP FM P+IEK
Sbjct: 527 KSVCIGNPSPTPVPRPTPVPKPTMVLMLYIPHVDWMPLFMCPYIEK 664
>TC80063 similar to GP|6513925|gb|AAF14829.1| unknown protein {Arabidopsis
thaliana}, partial (71%)
Length = 736
Score = 38.5 bits (88), Expect = 0.013
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +3
Query: 756 VIGDGHCGFRAIAEFMGLTEKNHLMIRTHLIQELMDHRDDY 796
V GDG+C FRA+++ + + ++H IR ++++L DHR Y
Sbjct: 507 VSGDGNCQFRALSDQLFRSPEHHKHIRKDIVKQLKDHRSLY 629
>TC81753 similar to PIR|G96752|G96752 unknown protein F28P22.2 [imported] -
Arabidopsis thaliana, partial (6%)
Length = 1273
Score = 38.1 bits (87), Expect = 0.017
Identities = 27/75 (36%), Positives = 36/75 (48%)
Frame = +1
Query: 651 PPPRKVPTKGAKKKVDIARSKGKITSTSRIPSSWEVVDSQNPDSQPSPSPTTSSYKRKKG 710
PPP K+P + + D R +S S P S EVV+S P SQ S SP + K
Sbjct: 805 PPPFKLPAWKFRVQGDYVRVDSIGSSRSGSPDSDEVVES--PVSQCSNSPYAEDGEEKNA 978
Query: 711 ARLGKTSLSPLPPPT 725
+G S +PL P+
Sbjct: 979 TEIGNASANPLFCPS 1023
>BG450209 similar to GP|10177604|db gb|AAD41995.1~gene_id:K21H1.13~similar to
unknown protein {Arabidopsis thaliana}, partial (40%)
Length = 680
Score = 37.7 bits (86), Expect = 0.022
Identities = 14/43 (32%), Positives = 30/43 (69%)
Frame = +1
Query: 752 KVVDVIGDGHCGFRAIAEFMGLTEKNHLMIRTHLIQELMDHRD 794
++V+V DG+C FRA+A+ + E+ H R+ +++ ++D+R+
Sbjct: 247 RIVEVTADGNCFFRALADQLEGNEEEHQKYRSMVVKHILDNRE 375
>TC77547 similar to PIR|T48354|T48354 hypothetical protein F12E4.60 -
Arabidopsis thaliana, partial (53%)
Length = 2073
Score = 36.2 bits (82), Expect = 0.064
Identities = 17/48 (35%), Positives = 28/48 (57%)
Frame = +3
Query: 749 FIEKVVDVIGDGHCGFRAIAEFMGLTEKNHLMIRTHLIQELMDHRDDY 796
F+E V GDG+C FRA+++ + T +H +R ++ +L H D Y
Sbjct: 1224 FVEHKVQ--GDGNCQFRALSDQLYNTPDHHKFVRRKVVNQLKSHPDIY 1361
>TC90952 similar to GP|15724316|gb|AAL06551.1 AT4g34150/F28A23_90
{Arabidopsis thaliana}, partial (49%)
Length = 1046
Score = 34.3 bits (77), Expect = 0.24
Identities = 23/55 (41%), Positives = 24/55 (42%)
Frame = +2
Query: 689 SQNPDSQPSPSPTTSSYKRKKGARLGKTSLSPLPPPTRYPKPKAIPVMRPIDYMP 743
S P S PSP P TSS +S SP PPP YP A P P Y P
Sbjct: 617 SPYPSSVPSPYPPTSS-----------SSPSPYPPPHSYPPSSAYP---PPSYPP 739
>TC85163 similar to SP|P36212|R123_ARATH 50S ribosomal protein L12-3
chloroplast precursor (CL12-C). [Mouse-ear cress],
partial (75%)
Length = 1022
Score = 33.5 bits (75), Expect = 0.41
Identities = 28/101 (27%), Positives = 43/101 (41%), Gaps = 4/101 (3%)
Frame = +1
Query: 635 KEGLRQLAFPETTLMSPPPRKVPTKGAKKKVDIARSKGKITSTSRIPSS-WEVVDSQNPD 693
++ L QL+ P L +PP +K + + + + S T +PS W + +
Sbjct: 76 QQPLSQLSQPSHFLTTPPSQKNQSPPSISPPNPSPSPTTTTIPVSVPSPPWPLK*KNSAT 255
Query: 694 SQP---SPSPTTSSYKRKKGARLGKTSLSPLPPPTRYPKPK 731
+ P SP P TSS KK + P PPP +P K
Sbjct: 256 TSPTSLSPKPKTSSTTSKKNSA*PPLPSLPPPPPLLHPPLK 378
>TC83787 similar to GP|9757890|dbj|BAB08397.1 phosphoribosylanthranilate
transferase-like protein {Arabidopsis thaliana}, partial
(11%)
Length = 1008
Score = 33.1 bits (74), Expect = 0.54
Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Frame = +2
Query: 610 FCVEVELKAIVERLKKLPFQMKLEVKEGLRQLAFPETTLMSPPPRKVPTKGAKKKVDIAR 669
F + E I LKK ++ K GL+ E + PPP VP
Sbjct: 53 FVKKGEEALIYYELKKKSLFNMVQGKVGLKIYYVDEE--IPPPPPPVPVPENPPAPSSEP 226
Query: 670 SKGKITSTSRIPSSWEVVDSQNPDSQPS--PSPTTSSYKRKKGARLGKTSLSPLPPPTRY 727
GK+ + PS E V+ P QPS P P + + + K + + P P P +
Sbjct: 227 PSGKVEESPPPPSELEKVEPP-PSDQPSGAPPPPSEAGPQPKAEGEQEPKVEPEPVPEQI 403
Query: 728 PKPKAIPVMRPIDYMP 743
P + V+ P+D P
Sbjct: 404 PVQE--EVVDPMDANP 445
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,708,713
Number of Sequences: 36976
Number of extensions: 544572
Number of successful extensions: 3580
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 3264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3531
length of query: 985
length of database: 9,014,727
effective HSP length: 105
effective length of query: 880
effective length of database: 5,132,247
effective search space: 4516377360
effective search space used: 4516377360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC140549.7