TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140068.2 + phase: 0 
         (501 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC90341 similar to GP|21703099|gb|AAM74492.1 At1g76120/T23E18_5 ...    91  8e-19
TC81896 similar to GP|21703099|gb|AAM74492.1 At1g76120/T23E18_5 ...    56  4e-08
BG453900 similar to GP|15810663|gb| unknown protein {Arabidopsis...    34  0.15
TC92928 similar to GP|2160170|gb|AAB60733.1| F21M12.19 gene prod...    31  0.97
BQ144513 similar to GP|995935|gb|AA MAZ {Homo sapiens}, partial ...    30  2.2
TC88200 similar to GP|6671963|gb|AAF23222.1| unknown protein {Ar...    30  2.2
BE325336                                                               28  6.3
TC87984 weakly similar to GP|10177368|dbj|BAB10659. contains sim...    28  6.3
BQ751138 weakly similar to GP|15991793|gb platelet binding prote...    28  8.2
AL380637 similar to GP|12698095|dbj hypothetical protein {Macaca...    28  8.2

>TC90341 similar to GP|21703099|gb|AAM74492.1 At1g76120/T23E18_5
           {Arabidopsis thaliana}, partial (38%)
          Length = 1103

 Score = 91.3 bits (225), Expect = 8e-19
 Identities = 69/258 (26%), Positives = 120/258 (45%)
 Frame = +2

Query: 54  FRKKKVVMRIAYTGTNYRGLQMQRDQNSLSTVEKELESAIFKAGGIRESNLGDLEKIGWA 113
           ++++KV +  AY G  Y+G+Q         T+E ELE A++ +G + E + G  ++  WA
Sbjct: 239 YKRRKVAIFFAYCGVGYQGMQKNP---GAKTIEGELEEALYVSGAVPEQDRGLSKRYDWA 409

Query: 114 RSSRTDKGVHSLATMVAFKMEIPENSWNEDPFGFALANYVNSYLPCDIKVISILPAQRSF 173
           RS+RTDKGV ++  +V+ +  I       DP GF   + +NS LP  I++        SF
Sbjct: 410 RSARTDKGVSAVGQVVSGRFYI-------DPPGF--VDRLNSNLPSQIRIFGFKRVTASF 562

Query: 174 DPRKECVLRKYSYLLPADIIGIQSHSSNDEIDYHMSEFNDILKEFEGGHPFHNYTSRSRY 233
             +K C  R+Y YL+P   +    H   + +   +   N+++K              S  
Sbjct: 563 SAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELVK----------CLPCSER 712

Query: 234 RRHIPRRPSHSKCGEILSAYNSEQEDSDEEENFKVDEALTGNIECQNQKSSGTSDSCEPV 293
            R +     +SK    L A + E   S+  +N  VD  +T ++E    K      + E +
Sbjct: 713 GRKVEGVVGNSKRNLELEAVDVENGSSN--KNDVVDSGVTKDVEVSLSKGDDNHLNKESI 886

Query: 294 IETGNKGNLHDQSSSSVV 311
            +   K ++ + +S +VV
Sbjct: 887 NDNEGKVSVEEVNSKTVV 940


>TC81896 similar to GP|21703099|gb|AAM74492.1 At1g76120/T23E18_5
           {Arabidopsis thaliana}, partial (26%)
          Length = 827

 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 35/106 (33%), Positives = 51/106 (48%)
 Frame = +2

Query: 346 GHSYIEIYIEGESFMLHQIRKMVATAVAVKRKLLPRDIITLSLSKFSRIILPLAPSEVLL 405
           G  +++  I G+SFMLHQIRKM+  AVA+ R   P  +I  +L K   I +P AP   L 
Sbjct: 140 GMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLY 319

Query: 406 LRGNSFSMRTKPGNVTRPEMQTIVESEEINKVVDDFYRSVMLPQVS 451
           L    F+   +    T  E    V  +   K  +DF    + P ++
Sbjct: 320 LDECFFTSYNQKWKDTHEE----VSMKAYEKEAEDFKMQYIYPHIA 445


>BG453900 similar to GP|15810663|gb| unknown protein {Arabidopsis thaliana},
           partial (3%)
          Length = 633

 Score = 33.9 bits (76), Expect = 0.15
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -1

Query: 365 RKMVATAVAVKRKLLPRDIITL--SLSKFSRIILPLAPSEVLLLRGNSFSMRTKP 417
           R+++    A++R+  PR  I     L +  ++ LP APS +LLL  NSFS   +P
Sbjct: 297 RRIIPL*TALQRRKPPRRSIVCFDQLFRLLKVFLPTAPSLLLLLHRNSFSRHGEP 133


>TC92928 similar to GP|2160170|gb|AAB60733.1| F21M12.19 gene product
           {Arabidopsis thaliana}, partial (39%)
          Length = 643

 Score = 31.2 bits (69), Expect = 0.97
 Identities = 22/78 (28%), Positives = 37/78 (47%)
 Frame = +2

Query: 57  KKVVMRIAYTGTNYRGLQMQRDQNSLSTVEKELESAIFKAGGIRESNLGDLEKIGWARSS 116
           ++ ++ + Y GT + G Q Q    +++ V   LE A  K  G         + +    SS
Sbjct: 155 QRYLVAVEYIGTRFFGFQKQLTDRTVAGV---LEDAFCKFVG---------QPVSVVCSS 298

Query: 117 RTDKGVHSLATMVAFKME 134
           RTD GVH+L+ +    +E
Sbjct: 299 RTDAGVHALSNVCHVDIE 352


>BQ144513 similar to GP|995935|gb|AA MAZ {Homo sapiens}, partial (3%)
          Length = 1447

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 12/28 (42%), Positives = 15/28 (52%)
 Frame = -3

Query: 214  ILKEFEGGHPFHNYTSRSRYRRHIPRRP 241
            ++  F   H  H YTSR  Y RH+P  P
Sbjct: 1406 VITTFSSSHRHHLYTSRHFYSRHLPIPP 1323


>TC88200 similar to GP|6671963|gb|AAF23222.1| unknown protein {Arabidopsis
            thaliana}, partial (88%)
          Length = 1788

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 18/57 (31%), Positives = 31/57 (53%)
 Frame = +1

Query: 262  EEENFKVDEALTGNIECQNQKSSGTSDSCEPVIETGNKGNLHDQSSSSVVRAKWLYE 318
            E +N + ++ +TGN     Q +S +SDS  P     N G+L D S+S  +++  L +
Sbjct: 1132 EMDNVRKNKHITGNKVDDIQLTSFSSDSSTP----SNSGSLPDASNSDAIKSSLLVD 1290


>BE325336 
          Length = 578

 Score = 28.5 bits (62), Expect = 6.3
 Identities = 14/36 (38%), Positives = 20/36 (54%)
 Frame = +1

Query: 257 QEDSDEEENFKVDEALTGNIECQNQKSSGTSDSCEP 292
           +EDS+   N K  ++LT  I+    K+SG   SC P
Sbjct: 301 EEDSESNNNAKSVKSLTCQIKDMALKASGVYKSCNP 408


>TC87984 weakly similar to GP|10177368|dbj|BAB10659. contains similarity to
           heat shock transcription factor HSF30~gene_id:K16L22.13,
           partial (5%)
          Length = 696

 Score = 28.5 bits (62), Expect = 6.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 232 RYRRHIPRRPSHSKCGEILS 251
           R+R+H P  P  S+C E+LS
Sbjct: 305 RFRQHCPHSPQISRCSEVLS 364


>BQ751138 weakly similar to GP|15991793|gb platelet binding protein GspB
           {Streptococcus gordonii}, partial (1%)
          Length = 703

 Score = 28.1 bits (61), Expect = 8.2
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -3

Query: 232 RYRRHIPRRPSHSKCGEILSAYNSEQEDSDEEENFKVDEALT-GNIECQNQKSSGTSDSC 290
           R R+  P  P     G+       +Q+D +EEE   +    T GN++ +++    T D+ 
Sbjct: 515 RRRKRRPGVPCWKISGDSQQQQQQQQQDEEEEETSWISVMTTYGNVQSESETERETVDAS 336

Query: 291 E 291
           E
Sbjct: 335 E 333


>AL380637 similar to GP|12698095|dbj hypothetical protein {Macaca
           fascicularis}, partial (3%)
          Length = 448

 Score = 28.1 bits (61), Expect = 8.2
 Identities = 26/79 (32%), Positives = 34/79 (42%), Gaps = 4/79 (5%)
 Frame = +3

Query: 191 DIIGIQSHSSNDEIDYHMSEFNDILKEFEGGHPFHNYTSRSR---YRRHIPR-RPSHSKC 246
           DII  Q  SS D +      F D+    E  H  + Y + S    + R +P   P     
Sbjct: 12  DIICFQKDSSMDIVK--QIPFRDVCSYLEYVHKRYPYVASSFEYVHNRQVPFCHPGIEFE 185

Query: 247 GEILSAYNSEQEDSDEEEN 265
            E  S  +SE EDS EE+N
Sbjct: 186 DEDSSEEDSEDEDSSEEQN 242


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.132    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,626,220
Number of Sequences: 36976
Number of extensions: 222711
Number of successful extensions: 1224
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of query: 501
length of database: 9,014,727
effective HSP length: 100
effective length of query: 401
effective length of database: 5,317,127
effective search space: 2132167927
effective search space used: 2132167927
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)