TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140028.4 - phase: 2 /pseudo
         (30 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BQ144539 GP|13173388|g lysine/glutamic acid-rich protein {Candid...    27  1.4
TC88386 similar to GP|19699309|gb|AAL91265.1 AT4g10840/F25I24_50...    27  1.8
TC80510 similar to PIR|T05005|T05005 hypothetical protein T19P19...    25  9.0

>BQ144539 GP|13173388|g lysine/glutamic acid-rich protein {Candida albicans},
           partial (1%)
          Length = 476

 Score = 27.3 bits (59), Expect = 1.4
 Identities = 12/26 (46%), Positives = 19/26 (72%)
 Frame = +1

Query: 4   QTEVRKREEKEAAEALRRDQELREAK 29
           + E  +R+EKE AE L++ +E +EAK
Sbjct: 115 EEEEPERKEKEEAEILKKSKEKKEAK 192


>TC88386 similar to GP|19699309|gb|AAL91265.1 AT4g10840/F25I24_50
           {Arabidopsis thaliana}, partial (21%)
          Length = 736

 Score = 26.9 bits (58), Expect = 1.8
 Identities = 12/27 (44%), Positives = 19/27 (69%)
 Frame = -3

Query: 4   QTEVRKREEKEAAEALRRDQELREAKR 30
           +T  +++EEKE  EA  + QE+REA +
Sbjct: 656 KTITQEQEEKEKTEARNKYQEIREAPK 576


>TC80510 similar to PIR|T05005|T05005 hypothetical protein T19P19.70 -
           Arabidopsis thaliana, partial (8%)
          Length = 889

 Score = 24.6 bits (52), Expect = 9.0
 Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = +3

Query: 10  REEKEAAEALR-RDQELREA 28
           REE+EAAEA R ++QE  EA
Sbjct: 582 REEREAAEAARKKEQEAAEA 641


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.306    0.120    0.290 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 356,911
Number of Sequences: 36976
Number of extensions: 1016
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of query: 30
length of database: 9,014,727
effective HSP length: 6
effective length of query: 24
effective length of database: 8,792,871
effective search space: 211028904
effective search space used: 211028904
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 52 (24.6 bits)