BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139841.15 - phase: 0
(147 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC76615 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 286 2e-78
TC76622 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 282 4e-77
TC76623 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 282 4e-77
TC76616 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 282 4e-77
TC76619 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 282 4e-77
TC76618 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 280 1e-76
TC76620 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 280 1e-76
TC76617 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 278 4e-76
TC76621 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 258 8e-70
TC88505 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 234 9e-63
TC90997 homologue to PIR|T06390|T06390 histone H2B-3 - tomato (f... 233 3e-62
BI270971 homologue to PIR|T06390|T06 histone H2B-3 - tomato (fra... 231 8e-62
TC87464 homologue to GP|7635498|emb|CAB88668.1 histone H2B {Cice... 230 1e-61
BG450237 homologue to SP|O22582|H2B_ Histone H2B. [Upland cotton... 195 7e-51
TC91944 similar to PIR|S11937|S11937 histone H2B - Emericella ni... 168 8e-43
TC80332 similar to PIR|S11937|S11937 histone H2B - Emericella ni... 163 1e-42
AL384299 PIR|T30054|HSK histone H2B [validated] - Caenorhabditis... 62 8e-11
TC86391 similar to GP|4097571|gb|AAD09514.1| GMFP5 {Glycine max}... 39 8e-04
CB893867 similar to GP|20197942|gb putative farnesylated protein... 39 8e-04
BQ752218 similar to GP|19170914|emb hypothetical protein {Enceph... 38 0.001
>TC76615 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 685
Score = 286 bits (733), Expect = 2e-78
Identities = 147/147 (100%), Positives = 147/147 (100%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY
Sbjct: 75 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 254
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA
Sbjct: 255 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 434
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 435 VRLVLPGELAKHAVSEGTKAVTKFTSS 515
>TC76622 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 904
Score = 282 bits (721), Expect = 4e-77
Identities = 147/148 (99%), Positives = 147/148 (99%), Gaps = 1/148 (0%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK RSKKNVET
Sbjct: 74 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 253
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 254 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 433
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 434 AVRLVLPGELAKHAVSEGTKAVTKFTSS 517
>TC76623 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 647
Score = 282 bits (721), Expect = 4e-77
Identities = 147/148 (99%), Positives = 147/148 (99%), Gaps = 1/148 (0%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK RSKKNVET
Sbjct: 72 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 251
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 252 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 431
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 432 AVRLVLPGELAKHAVSEGTKAVTKFTSS 515
>TC76616 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 698
Score = 282 bits (721), Expect = 4e-77
Identities = 147/148 (99%), Positives = 147/148 (99%), Gaps = 1/148 (0%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK RSKKNVET
Sbjct: 84 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 263
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 264 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 443
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 444 AVRLVLPGELAKHAVSEGTKAVTKFTSS 527
>TC76619 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 718
Score = 282 bits (721), Expect = 4e-77
Identities = 147/148 (99%), Positives = 147/148 (99%), Gaps = 1/148 (0%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK RSKKNVET
Sbjct: 75 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 254
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 255 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 434
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 435 AVRLVLPGELAKHAVSEGTKAVTKFTSS 518
>TC76618 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 755
Score = 280 bits (717), Expect = 1e-76
Identities = 146/148 (98%), Positives = 147/148 (98%), Gaps = 1/148 (0%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAG+KKK RSKKNVET
Sbjct: 62 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKNVET 241
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 242 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 421
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 422 AVRLVLPGELAKHAVSEGTKAVTKFTSS 505
>TC76620 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 718
Score = 280 bits (717), Expect = 1e-76
Identities = 146/148 (98%), Positives = 147/148 (98%), Gaps = 1/148 (0%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAG+KKK RSKKNVET
Sbjct: 35 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKNVET 214
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 215 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 394
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 395 AVRLVLPGELAKHAVSEGTKAVTKFTSS 478
>TC76617 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 760
Score = 278 bits (712), Expect = 4e-76
Identities = 145/148 (97%), Positives = 147/148 (98%), Gaps = 1/148 (0%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAG+KKK RSKK+VET
Sbjct: 93 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 272
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 273 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 452
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 453 AVRLVLPGELAKHAVSEGTKAVTKFTSS 536
>TC76621 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, partial (89%)
Length = 589
Score = 258 bits (658), Expect = 8e-70
Identities = 137/148 (92%), Positives = 141/148 (94%), Gaps = 1/148 (0%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPKGEKKPAE EKKSTVAEKAPAEKKPKAGKKLPKE GSA+G+KKK R+KK+VET
Sbjct: 56 MAPKGEKKPAE-----EKKSTVAEKAPAEKKPKAGKKLPKESGSASGEKKKKRNKKSVET 220
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 221 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 400
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 401 AVRLVLPGELAKHAVSEGTKAVTKFTSS 484
>TC88505 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, partial (92%)
Length = 690
Score = 234 bits (597), Expect = 9e-63
Identities = 126/147 (85%), Positives = 130/147 (87%)
Frame = +1
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAPK EKKPAEKKPAE K+PAEKKPKA KK+ KEGG KKKR KK+VETY
Sbjct: 76 MAPKAEKKPAEKKPAE--------KSPAEKKPKAEKKISKEGGDK---KKKRVKKSVETY 222
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTA
Sbjct: 223 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTA 402
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 403 VRLVLPGELAKHAVSEGTKAVTKFTSS 483
>TC90997 homologue to PIR|T06390|T06390 histone H2B-3 - tomato (fragment),
partial (94%)
Length = 665
Score = 233 bits (593), Expect = 3e-62
Identities = 128/147 (87%), Positives = 132/147 (89%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAPKGEKKPAEKKPAE KAPAEK KA KK+PKE S+A KKKR+KK+VETY
Sbjct: 50 MAPKGEKKPAEKKPAE--------KAPAEKT-KAEKKIPKEA-SSADKKKKRNKKSVETY 199
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA
Sbjct: 200 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 379
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 380 VRLVLPGELAKHAVSEGTKAVTKFTSS 460
>BI270971 homologue to PIR|T06390|T06 histone H2B-3 - tomato (fragment),
partial (94%)
Length = 441
Score = 231 bits (589), Expect = 8e-62
Identities = 127/147 (86%), Positives = 131/147 (88%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAPKGEKKPAEKKPAE KAPAEK KA KK+PKE S+ KKKR+KK+VETY
Sbjct: 17 MAPKGEKKPAEKKPAE--------KAPAEKT-KAEKKIPKEA-SSTDKKKKRNKKSVETY 166
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA
Sbjct: 167 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 346
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 347 VRLVLPGELAKHAVSEGTKAVTKFTSS 427
>TC87464 homologue to GP|7635498|emb|CAB88668.1 histone H2B {Cicer
arietinum}, complete
Length = 677
Score = 230 bits (587), Expect = 1e-61
Identities = 124/144 (86%), Positives = 128/144 (88%)
Frame = +3
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETYKIY 63
K EKKPAEKKPAE KAPAEKKPKA KK+ KEG S KKKR+KK+VETYKIY
Sbjct: 69 KAEKKPAEKKPAE--------KAPAEKKPKAEKKISKEGSS--DKKKKRTKKSVETYKIY 218
Query: 64 IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRL 123
IFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRL
Sbjct: 219 IFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRL 398
Query: 124 VLPGELAKHAVSEGTKAVTKFTSS 147
VLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 399 VLPGELAKHAVSEGTKAVTKFTSS 470
>BG450237 homologue to SP|O22582|H2B_ Histone H2B. [Upland cotton] {Gossypium
hirsutum}, partial (80%)
Length = 682
Score = 195 bits (496), Expect(2) = 7e-51
Identities = 103/110 (93%), Positives = 103/110 (93%), Gaps = 1/110 (0%)
Frame = -2
Query: 24 EKAPAEKKPKAGKKLPKEGGSAAGDKK-KRSKKNVETYKIYIFKVLKQVHPDIGISSKAM 82
EKAPAEKKPKAGKKLPKEGGSAAGD K KRSKKNVETYKIYIFKVLKQVHPDIG SSKAM
Sbjct: 492 EKAPAEKKPKAGKKLPKEGGSAAGDXKXKRSKKNVETYKIYIFKVLKQVHPDIGXSSKAM 313
Query: 83 GIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKH 132
GIMNSFINDIF KLAQESSRLARYNKK TITSREIQT VRLVL GELAKH
Sbjct: 312 GIMNSFINDIFXKLAQESSRLARYNKKXTITSREIQTXVRLVLXGELAKH 163
Score = 21.2 bits (43), Expect(2) = 7e-51
Identities = 9/11 (81%), Positives = 11/11 (99%)
Frame = -3
Query: 133 AVSEGTKAVTK 143
AVSEGTKAV++
Sbjct: 161 AVSEGTKAVSQ 129
>TC91944 similar to PIR|S11937|S11937 histone H2B - Emericella nidulans,
partial (79%)
Length = 772
Score = 168 bits (425), Expect = 8e-43
Identities = 97/150 (64%), Positives = 112/150 (74%), Gaps = 3/150 (2%)
Frame = +3
Query: 1 MAPKGEKKPAE--KKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDK-KKRSKKNV 57
M PK EKKPA K PA KAPAEKK K P A+GDK KK+ K
Sbjct: 93 MGPKAEKKPATGGKAPA---------KAPAEKKDS---KKPV----ASGDKTKKKRKVRK 224
Query: 58 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 117
ETY YI+KVLKQVHPD GIS+KAM I+NSF+NDIFE+++ E+S+LA YNK+ TI+SREI
Sbjct: 225 ETYSSYIYKVLKQVHPDTGISNKAMSILNSFVNDIFERISGEASKLAAYNKRSTISSREI 404
Query: 118 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
QTAVRL+LPGELAKHAVSEGTKAVTK+TSS
Sbjct: 405 QTAVRLILPGELAKHAVSEGTKAVTKYTSS 494
>TC80332 similar to PIR|S11937|S11937 histone H2B - Emericella nidulans,
partial (92%)
Length = 562
Score = 163 bits (412), Expect(2) = 1e-42
Identities = 83/114 (72%), Positives = 96/114 (83%), Gaps = 2/114 (1%)
Frame = +3
Query: 36 KKLPKE--GGSAAGDKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIF 93
K LPK+ SA GDK K+ K ETY YI+KVLKQVHPD GIS+KAM IMNSF+NDIF
Sbjct: 96 KHLPKKKKAASAPGDKVKKKKARKETYSSYIYKVLKQVHPDTGISNKAMSIMNSFVNDIF 275
Query: 94 EKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
E++A E+S+LA YNK+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS
Sbjct: 276 ERIAAEASKLAAYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTSS 437
Score = 25.8 bits (55), Expect(2) = 1e-42
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 7 KKPAEKKPAEEKKSTVAEKAPAEKK 31
K AEKKPA A KAP++KK
Sbjct: 41 KAVAEKKPATTGGKAPAAKAPSKKK 115
>AL384299 PIR|T30054|HSK histone H2B [validated] - Caenorhabditis elegans,
partial (26%)
Length = 411
Score = 62.0 bits (149), Expect = 8e-11
Identities = 30/32 (93%), Positives = 32/32 (99%)
Frame = +1
Query: 116 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
EIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS
Sbjct: 1 EIQTAVRLILPGELAKHAVSEGTKAVTKYTSS 96
>TC86391 similar to GP|4097571|gb|AAD09514.1| GMFP5 {Glycine max}, partial
(54%)
Length = 1353
Score = 38.9 bits (89), Expect = 8e-04
Identities = 22/39 (56%), Positives = 27/39 (68%), Gaps = 2/39 (5%)
Frame = +2
Query: 5 GEKKPAEKKPAEEK--KSTVAEKAPAEKKPKAGKKLPKE 41
G +KPAEKKP E+K + V EK P EKKP+ +K PKE
Sbjct: 341 GAEKPAEKKPDEKKPEEKKVEEKKPEEKKPE--EKKPKE 451
Score = 29.3 bits (64), Expect = 0.60
Identities = 23/67 (34%), Positives = 35/67 (51%), Gaps = 5/67 (7%)
Frame = +2
Query: 1 MAPKGEKK-----PAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKK 55
+A K +KK P KK A +K AEK P EKKP+ KK+ ++ ++K+ K+
Sbjct: 281 LAEKAKKKVELLTPPPKKDAGAEKP--AEKKPDEKKPEE-KKVEEKKPEEKKPEEKKPKE 451
Query: 56 NVETYKI 62
+ KI
Sbjct: 452 STVVMKI 472
>CB893867 similar to GP|20197942|gb putative farnesylated protein
{Arabidopsis thaliana}, partial (27%)
Length = 565
Score = 38.9 bits (89), Expect = 8e-04
Identities = 22/39 (56%), Positives = 27/39 (68%), Gaps = 2/39 (5%)
Frame = +2
Query: 5 GEKKPAEKKPAEEK--KSTVAEKAPAEKKPKAGKKLPKE 41
G +KPAEKKP E+K + V EK P EKKP+ +K PKE
Sbjct: 206 GAEKPAEKKPDEKKPEEKKVEEKKPEEKKPE--EKKPKE 316
Score = 27.3 bits (59), Expect = 2.3
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 9 PAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETYKI 62
P KK A +K AEK P EKKP+ KK+ ++ ++K+ K++ KI
Sbjct: 185 PPPKKDAGAEKP--AEKKPDEKKPEE-KKVEEKKPEEKKPEEKKPKESTVVMKI 337
>BQ752218 similar to GP|19170914|emb hypothetical protein {Encephalitozoon
cuniculi}, partial (5%)
Length = 637
Score = 38.1 bits (87), Expect = 0.001
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = -2
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVET 59
K EKK AEKK EEK+ AEK E+K +A KK K DKK++ +K+ E+
Sbjct: 510 KEEKKEAEKKAKEEKRQ--AEKKIKEEKKEAEKKAKK-------DKKEQDRKDAES 370
Score = 28.9 bits (63), Expect = 0.78
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -2
Query: 6 EKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVE 58
+K+P +K EEK AEK + + +A KK K+ AA K K KK E
Sbjct: 633 KKRPKKK---EEKAKKEAEKKKKKAREEAAKK-AKKAREAAYKKAKEEKKEAE 487
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.306 0.125 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,938,752
Number of Sequences: 36976
Number of extensions: 30006
Number of successful extensions: 415
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of query: 147
length of database: 9,014,727
effective HSP length: 87
effective length of query: 60
effective length of database: 5,797,815
effective search space: 347868900
effective search space used: 347868900
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 54 (25.4 bits)
Medicago: description of AC139841.15