TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139841.14 + phase: 0 /pseudo
         (99 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BF647516 weakly similar to PIR|H84535|H84 hypothetical protein A...   150  1e-37
TC88220 similar to GP|15293201|gb|AAK93711.1 unknown protein {Ar...    32  0.031
BQ144057 similar to GP|1483567|emb| viral proteinase {Pseudorabi...    31  0.068
TC81023 similar to GP|2190542|gb|AAB60906.1| F5I14.5 gene produc...    28  0.58
TC85168 similar to PIR|T06827|T06827 lipoxygenase (EC 1.13.11.12...    28  0.58
TC79185 similar to GP|10178187|dbj|BAB11661. gene_id:MQN23.20~un...    27  0.98
TC79800 similar to SP|O43280|TREA_HUMAN Trehalase precursor (EC ...    27  1.3
BQ150819                                                               27  1.3
TC92065 similar to GP|21539445|gb|AAM53275.1 putative copper ami...    27  1.7
TC81933 similar to SP|P10496|GRP2_PHAVU Glycine-rich cell wall s...    27  1.7
TC78852 similar to GP|19310653|gb|AAL85057.1 unknown protein {Ar...    27  1.7
TC92699 similar to GP|21537190|gb|AAM61531.1 putative SKP1-like ...    26  2.2
TC79835 homologue to SP|P51082|CHSB_PEA Chalcone synthase 1B (EC...    26  2.2
TC80504 similar to GP|16152176|gb|AAL14994.1 NIFS-like protein C...    26  2.2
TC77221 weakly similar to PIR|T01996|T01996 nucleoid DNA-binding...    26  2.2
BG648527                                                               26  2.2
TC93713 homologue to GP|6752886|gb|AAF27919.1| Ttg1-like protein...    26  2.2
BG587461 weakly similar to GP|8809631|dbj| HSR203J protein-like ...    26  2.9
TC81176 similar to GP|17065122|gb|AAL32715.1 Similar replication...    26  2.9
TC90599                                                                26  2.9

>BF647516 weakly similar to PIR|H84535|H84 hypothetical protein At2g16030
           [imported] - Arabidopsis thaliana, partial (51%)
          Length = 635

 Score =  150 bits (378), Expect = 1e-37
 Identities = 73/98 (74%), Positives = 83/98 (84%)
 Frame = +1

Query: 1   MEKEIETFLRKLSLVAIAIASLTLLILFLQIPNTRVPSEAPSKPHLRFPKSTCDFTSTHL 60
           MEKEI+TFLRKLS+ +IAIAS+TL+ LFL  P+T VP EAP KPH RFPKSTCDFTS+  
Sbjct: 112 MEKEIDTFLRKLSIASIAIASVTLISLFLITPDTCVPPEAPLKPHFRFPKSTCDFTSSRP 291

Query: 61  HLPSHKKNNRLWSSRDWNNKLHSFSRLFLHIRNLGLLP 98
            LPS KKNNRLWSSRDWNNKL SFS +FL IR++GLLP
Sbjct: 292 SLPSDKKNNRLWSSRDWNNKLRSFSLIFLSIRDIGLLP 405


>TC88220 similar to GP|15293201|gb|AAK93711.1 unknown protein {Arabidopsis
            thaliana}, partial (26%)
          Length = 1388

 Score = 32.3 bits (72), Expect = 0.031
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -2

Query: 19   IASLTLLILFLQIPNTRVPSEAPSKPHLRFPKSTCDFTSTHLHLPSH 65
            I+SL++ I+++ IP T +PS       +R     C+  +  LHLPSH
Sbjct: 1000 ISSLSIAIIWI-IPLTWIPSSGGGSSSMRSFLCICNLCTKFLHLPSH 863


>BQ144057 similar to GP|1483567|emb| viral proteinase {Pseudorabies virus},
           partial (5%)
          Length = 1295

 Score = 31.2 bits (69), Expect = 0.068
 Identities = 17/46 (36%), Positives = 22/46 (46%), Gaps = 7/46 (15%)
 Frame = +1

Query: 32  PNTRVPSEA-------PSKPHLRFPKSTCDFTSTHLHLPSHKKNNR 70
           PN   P EA       P++P  R P  T  F+STH H P   K ++
Sbjct: 181 PNPPAPREAARPAPSHPARPTRRIPHRTPQFSSTHTHQPIPYKTHQ 318


>TC81023 similar to GP|2190542|gb|AAB60906.1| F5I14.5 gene product
           {Arabidopsis thaliana}, partial (72%)
          Length = 839

 Score = 28.1 bits (61), Expect = 0.58
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = +3

Query: 32  PNTRVPSEAPSKPHL----RFPKSTCDFTSTHLHLPSHKKNNRLWSSR 75
           PNT      PS+PH     +   S C  TS HL  P H +  ++   R
Sbjct: 84  PNTNRQR*TPSQPHTSQFNQIRPSPCPSTSHHLLRPHHHRTRKILLQR 227


>TC85168 similar to PIR|T06827|T06827 lipoxygenase (EC 1.13.11.12) - garden
            pea, partial (98%)
          Length = 2890

 Score = 28.1 bits (61), Expect = 0.58
 Identities = 12/31 (38%), Positives = 18/31 (57%)
 Frame = +1

Query: 50   KSTCDFTSTHLHLPSHKKNNRLWSSRDWNNK 80
            KS CD  S+ +    H + + LW S+ +NNK
Sbjct: 1204 KS*CDSPSSRVSTKKHTRYHCLW*SKQYNNK 1296


>TC79185 similar to GP|10178187|dbj|BAB11661. gene_id:MQN23.20~unknown
           protein {Arabidopsis thaliana}, partial (34%)
          Length = 1450

 Score = 27.3 bits (59), Expect = 0.98
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 12  LSLVAIAIASLTLLILFLQIPNTRVPSEAPSKPHLRFPKSTCDFTSTHLHLPS 64
           L ++ I I    +L+LFLQ+P       + S PH  F  +    TS H   P+
Sbjct: 111 LVIITITITLSHILLLFLQLP----LHSSRSSPHAPFISTLQSSTSNHFPHPT 257


>TC79800 similar to SP|O43280|TREA_HUMAN Trehalase precursor (EC 3.2.1.28)
           (Alpha alpha-trehalase) (Alpha alpha-trehalose
           glucohydrolase)., partial (2%)
          Length = 654

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = +3

Query: 37  PSEAPSKPHLRFPK----STCDFTSTHLHLPSHKKNN 69
           P+ APSKP  + P      T  FT T  H P H  N+
Sbjct: 144 PTTAPSKPLNQLPSFNQLQTHTFTHTPHHQPQHHTNS 254


>BQ150819 
          Length = 459

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 13/100 (13%)
 Frame = +1

Query: 7   TFLRKLSLVAIAIASLTLLILFLQIPNTRVPSEAPSK-------------PHLRFPKSTC 53
           +FL K   +AI++ +LTL++L  + P   +PS   +              PHL    S  
Sbjct: 61  SFLDKPIRIAISVITLTLVLLHSRFPLFLIPSLLFTVIYSVSALPHYILIPHLT*STSIY 240

Query: 54  DFTSTHLHLPSHKKNNRLWSSRDWNNKLHSFSRLFLHIRN 93
              S  +H   H     ++SS  + NK+H+     LH  N
Sbjct: 241 SIQSYFVHSTLH--YYLVFSSLKY-NKIHNIQLFALHYSN 351


>TC92065 similar to GP|21539445|gb|AAM53275.1 putative copper amine oxidase
           {Arabidopsis thaliana}, partial (2%)
          Length = 1396

 Score = 26.6 bits (57), Expect = 1.7
 Identities = 13/32 (40%), Positives = 17/32 (52%)
 Frame = -1

Query: 33  NTRVPSEAPSKPHLRFPKSTCDFTSTHLHLPS 64
           +T  PS   ++  LR   STC  T +  HLPS
Sbjct: 913 STSRPSRTYTRSRLR*RASTCSLTVSRQHLPS 818


>TC81933 similar to SP|P10496|GRP2_PHAVU Glycine-rich cell wall structural
          protein 1.8 precursor (GRP 1.8). [Kidney bean  French
          bean], partial (4%)
          Length = 765

 Score = 26.6 bits (57), Expect = 1.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 59 HLHLPSHKKNNRLWSSRDWNNKLHSFSRLFLHIRN 93
          H H   H + NRL  S  W +   +F  L  H R+
Sbjct: 34 HNHHLRHHRRNRLQKSHSWRHLRLAFQLLHQHFRH 138


>TC78852 similar to GP|19310653|gb|AAL85057.1 unknown protein {Arabidopsis
           thaliana}, partial (83%)
          Length = 1619

 Score = 26.6 bits (57), Expect = 1.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 67  KNNRLWSSRDWNNKLHSFSRLFLHI 91
           + N+     D N  LHSF+ L LHI
Sbjct: 919 RGNKYLEGNDQNPSLHSFNNLHLHI 993


>TC92699 similar to GP|21537190|gb|AAM61531.1 putative SKP1-like protein
           {Arabidopsis thaliana}, partial (25%)
          Length = 599

 Score = 26.2 bits (56), Expect = 2.2
 Identities = 18/69 (26%), Positives = 28/69 (40%)
 Frame = +1

Query: 21  SLTLLILFLQIPNTRVPSEAPSKPHLRFPKSTCDFTSTHLHLPSHKKNNRLWSSRDWNNK 80
           S  L I F      ++ ++   +  L+  KSTC   +     P      R+     WN K
Sbjct: 220 SFDLSIYFYTSKKLQISTDFSFQIGLKCRKSTCQLLNPR**SPIFGFRLRMVQFNRWNKK 399

Query: 81  LHSFSRLFL 89
           L  F+ LF+
Sbjct: 400 LQCFALLFV 426


>TC79835 homologue to SP|P51082|CHSB_PEA Chalcone synthase 1B (EC 2.3.1.74)
           (Naringenin-chalcone synthase 1B). [Garden pea] {Pisum
           sativum}, complete
          Length = 1393

 Score = 26.2 bits (56), Expect = 2.2
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = -3

Query: 34  TRVPSEAPSKPHLRFPKSTCDFTSTHLHLPSHKK--NNRLWSSRDWN 78
           TR     PS P      S   F  + +     KK   NRL+ SRDWN
Sbjct: 179 TRWQGHQPSVPGGSHQMSPFSFFESKVGREEEKKVSTNRLYLSRDWN 39


>TC80504 similar to GP|16152176|gb|AAL14994.1 NIFS-like protein CpNifsp
           precursor {Arabidopsis thaliana}, partial (30%)
          Length = 803

 Score = 26.2 bits (56), Expect = 2.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 29  LQIPNTRVPSEAPSKPHLRFPKSTCDFTSTHLH 61
           L +PN R+   APSK   R   S C F   +LH
Sbjct: 210 LSVPNIRIYGPAPSKEVKR--ASLCSFNVDNLH 302


>TC77221 weakly similar to PIR|T01996|T01996 nucleoid DNA-binding protein
           cnd41  chloroplast - common tobacco, partial (63%)
          Length = 2150

 Score = 26.2 bits (56), Expect = 2.2
 Identities = 13/67 (19%), Positives = 27/67 (39%)
 Frame = -1

Query: 32  PNTRVPSEAPSKPHLRFPKSTCDFTSTHLHLPSHKKNNRLWSSRDWNNKLHSFSRLFLHI 91
           P    P+E P+KP L +P+     +   +     +   +  + +DW+     ++  F  +
Sbjct: 998 PRPNRPAEPPNKPSLSWPQPNKKLSMASVGFTISRSRLKYPTEKDWSPYWMPYTHAFDTL 819

Query: 92  RNLGLLP 98
              G  P
Sbjct: 818 AQRGSFP 798


>BG648527 
          Length = 789

 Score = 26.2 bits (56), Expect = 2.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 73  SSRDWNNKLHSFSRLFLHIRNL 94
           S  DWNN LH+ S L +H+  L
Sbjct: 280 SMNDWNNSLHNES*LTVHLNVL 345


>TC93713 homologue to GP|6752886|gb|AAF27919.1| Ttg1-like protein {Malus x
           domestica}, partial (46%)
          Length = 637

 Score = 26.2 bits (56), Expect = 2.2
 Identities = 16/51 (31%), Positives = 24/51 (46%), Gaps = 1/51 (1%)
 Frame = +1

Query: 33  NTRVPSEAP-SKPHLRFPKSTCDFTSTHLHLPSHKKNNRLWSSRDWNNKLH 82
           NTR+PS       ++RFP  T      H+HL  HK     +  R  + ++H
Sbjct: 61  NTRIPSPIR*QLRNIRFPIPTL----RHVHLSQHKFPTTTYRRRKLHRRIH 201


>BG587461 weakly similar to GP|8809631|dbj| HSR203J protein-like protein
           {Arabidopsis thaliana}, partial (22%)
          Length = 700

 Score = 25.8 bits (55), Expect = 2.9
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 38  SEAPSKPHLRFPKSTCDFTSTHLHLPSHKKNNRLW 72
           S  P   HL    ST   T T L  PSH+  +R W
Sbjct: 139 SHQPFTQHLSSNISTSHST*TRLQAPSHRLFSRWW 243


>TC81176 similar to GP|17065122|gb|AAL32715.1 Similar replication factor C
           37-kDa subunit {Arabidopsis thaliana}, partial (79%)
          Length = 875

 Score = 25.8 bits (55), Expect = 2.9
 Identities = 14/29 (48%), Positives = 16/29 (54%), Gaps = 5/29 (17%)
 Frame = +1

Query: 56  TSTHLH-----LPSHKKNNRLWSSRDWNN 79
           +STH H     LP+H     LWSSR W N
Sbjct: 112 SSTHQHSRNWKLPTHAL---LWSSRHWKN 189


>TC90599 
          Length = 715

 Score = 25.8 bits (55), Expect = 2.9
 Identities = 10/35 (28%), Positives = 20/35 (56%)
 Frame = -3

Query: 59  HLHLPSHKKNNRLWSSRDWNNKLHSFSRLFLHIRN 93
           H H+P+H     + +S+ +NN +  F+ L   ++N
Sbjct: 701 HPHIPNHL*RTFIMNSKTFNNNIIIFTHLSQSLKN 597


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.323    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,940,309
Number of Sequences: 36976
Number of extensions: 67477
Number of successful extensions: 526
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of query: 99
length of database: 9,014,727
effective HSP length: 75
effective length of query: 24
effective length of database: 6,241,527
effective search space: 149796648
effective search space used: 149796648
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)