BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139841.13 - phase: 0
(148 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC76622 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 288 4e-79
TC76623 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 288 4e-79
TC76616 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 288 4e-79
TC76619 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 288 4e-79
TC76620 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 287 1e-78
TC76618 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 287 1e-78
TC76617 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 285 5e-78
TC76615 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 282 4e-77
TC76621 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 264 9e-72
TC88505 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co... 238 5e-64
TC90997 homologue to PIR|T06390|T06390 histone H2B-3 - tomato (f... 237 1e-63
BI270971 homologue to PIR|T06390|T06 histone H2B-3 - tomato (fra... 235 4e-63
TC87464 homologue to GP|7635498|emb|CAB88668.1 histone H2B {Cice... 235 6e-63
BG450237 homologue to SP|O22582|H2B_ Histone H2B. [Upland cotton... 199 4e-52
TC91944 similar to PIR|S11937|S11937 histone H2B - Emericella ni... 172 4e-44
TC80332 similar to PIR|S11937|S11937 histone H2B - Emericella ni... 160 8e-42
AL384299 PIR|T30054|HSK histone H2B [validated] - Caenorhabditis... 62 9e-11
TC86391 similar to GP|4097571|gb|AAD09514.1| GMFP5 {Glycine max}... 39 8e-04
CB893867 similar to GP|20197942|gb putative farnesylated protein... 39 8e-04
BQ752218 similar to GP|19170914|emb hypothetical protein {Enceph... 36 0.005
>TC76622 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 904
Score = 288 bits (738), Expect = 4e-79
Identities = 148/148 (100%), Positives = 148/148 (100%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET
Sbjct: 74 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 253
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 254 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 433
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 434 AVRLVLPGELAKHAVSEGTKAVTKFTSS 517
>TC76623 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 647
Score = 288 bits (738), Expect = 4e-79
Identities = 148/148 (100%), Positives = 148/148 (100%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET
Sbjct: 72 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 251
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 252 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 431
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 432 AVRLVLPGELAKHAVSEGTKAVTKFTSS 515
>TC76616 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 698
Score = 288 bits (738), Expect = 4e-79
Identities = 148/148 (100%), Positives = 148/148 (100%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET
Sbjct: 84 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 263
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 264 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 443
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 444 AVRLVLPGELAKHAVSEGTKAVTKFTSS 527
>TC76619 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 718
Score = 288 bits (738), Expect = 4e-79
Identities = 148/148 (100%), Positives = 148/148 (100%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET
Sbjct: 75 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 254
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 255 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 434
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 435 AVRLVLPGELAKHAVSEGTKAVTKFTSS 518
>TC76620 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 718
Score = 287 bits (734), Expect = 1e-78
Identities = 147/148 (99%), Positives = 148/148 (99%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAG+KKKKRSKKNVET
Sbjct: 35 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKNVET 214
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 215 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 394
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 395 AVRLVLPGELAKHAVSEGTKAVTKFTSS 478
>TC76618 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 755
Score = 287 bits (734), Expect = 1e-78
Identities = 147/148 (99%), Positives = 148/148 (99%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAG+KKKKRSKKNVET
Sbjct: 62 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKNVET 241
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 242 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 421
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 422 AVRLVLPGELAKHAVSEGTKAVTKFTSS 505
>TC76617 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 760
Score = 285 bits (729), Expect = 5e-78
Identities = 146/148 (98%), Positives = 148/148 (99%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAG+KKKKRSKK+VET
Sbjct: 93 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVET 272
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 273 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 452
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 453 AVRLVLPGELAKHAVSEGTKAVTKFTSS 536
>TC76615 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, complete
Length = 685
Score = 282 bits (721), Expect = 4e-77
Identities = 147/148 (99%), Positives = 147/148 (99%)
Frame = +3
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK RSKKNVET
Sbjct: 75 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 251
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 252 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 431
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 432 AVRLVLPGELAKHAVSEGTKAVTKFTSS 515
>TC76621 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, partial (89%)
Length = 589
Score = 264 bits (675), Expect = 9e-72
Identities = 138/148 (93%), Positives = 142/148 (95%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAE EKKSTVAEKAPAEKKPKAGKKLPKE GSA+G+KKKKR+KK+VET
Sbjct: 56 MAPKGEKKPAE-----EKKSTVAEKAPAEKKPKAGKKLPKESGSASGEKKKKRNKKSVET 220
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 221 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 400
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 401 AVRLVLPGELAKHAVSEGTKAVTKFTSS 484
>TC88505 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
{Gossypium hirsutum}, partial (92%)
Length = 690
Score = 238 bits (608), Expect = 5e-64
Identities = 128/148 (86%), Positives = 132/148 (88%)
Frame = +1
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPK EKKPAEKKPAE K+PAEKKPKA KK+ KEGG DKKKKR KK+VET
Sbjct: 76 MAPKAEKKPAEKKPAE--------KSPAEKKPKAEKKISKEGG----DKKKKRVKKSVET 219
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQT
Sbjct: 220 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 399
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 400 AVRLVLPGELAKHAVSEGTKAVTKFTSS 483
>TC90997 homologue to PIR|T06390|T06390 histone H2B-3 - tomato (fragment),
partial (94%)
Length = 665
Score = 237 bits (604), Expect = 1e-63
Identities = 130/148 (87%), Positives = 133/148 (89%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAE KAPAEK KA KK+PKE SA DKKKKR+KK+VET
Sbjct: 50 MAPKGEKKPAEKKPAE--------KAPAEKT-KAEKKIPKEASSA--DKKKKRNKKSVET 196
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 197 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 376
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 377 AVRLVLPGELAKHAVSEGTKAVTKFTSS 460
>BI270971 homologue to PIR|T06390|T06 histone H2B-3 - tomato (fragment),
partial (94%)
Length = 441
Score = 235 bits (600), Expect = 4e-63
Identities = 129/148 (87%), Positives = 132/148 (89%)
Frame = +2
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPKGEKKPAEKKPAE KAPAEK KA KK+PKE S DKKKKR+KK+VET
Sbjct: 17 MAPKGEKKPAEKKPAE--------KAPAEKT-KAEKKIPKEASST--DKKKKRNKKSVET 163
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 164 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 343
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 344 AVRLVLPGELAKHAVSEGTKAVTKFTSS 427
>TC87464 homologue to GP|7635498|emb|CAB88668.1 histone H2B {Cicer
arietinum}, complete
Length = 677
Score = 235 bits (599), Expect = 6e-63
Identities = 126/145 (86%), Positives = 130/145 (88%)
Frame = +3
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVETYKI 63
K EKKPAEKKPAE KAPAEKKPKA KK+ KEG S DKKKKR+KK+VETYKI
Sbjct: 69 KAEKKPAEKKPAE--------KAPAEKKPKAEKKISKEGSS---DKKKKRTKKSVETYKI 215
Query: 64 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 123
YIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR
Sbjct: 216 YIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 395
Query: 124 LVLPGELAKHAVSEGTKAVTKFTSS 148
LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 396 LVLPGELAKHAVSEGTKAVTKFTSS 470
>BG450237 homologue to SP|O22582|H2B_ Histone H2B. [Upland cotton] {Gossypium
hirsutum}, partial (80%)
Length = 682
Score = 199 bits (507), Expect(2) = 4e-52
Identities = 103/110 (93%), Positives = 103/110 (93%)
Frame = -2
Query: 24 EKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAM 83
EKAPAEKKPKAGKKLPKEGGSAAGD K KRSKKNVETYKIYIFKVLKQVHPDIG SSKAM
Sbjct: 492 EKAPAEKKPKAGKKLPKEGGSAAGDXKXKRSKKNVETYKIYIFKVLKQVHPDIGXSSKAM 313
Query: 84 GIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKH 133
GIMNSFINDIF KLAQESSRLARYNKK TITSREIQT VRLVL GELAKH
Sbjct: 312 GIMNSFINDIFXKLAQESSRLARYNKKXTITSREIQTXVRLVLXGELAKH 163
Score = 21.2 bits (43), Expect(2) = 4e-52
Identities = 9/11 (81%), Positives = 11/11 (99%)
Frame = -3
Query: 134 AVSEGTKAVTK 144
AVSEGTKAV++
Sbjct: 161 AVSEGTKAVSQ 129
>TC91944 similar to PIR|S11937|S11937 histone H2B - Emericella nidulans,
partial (79%)
Length = 772
Score = 172 bits (436), Expect = 4e-44
Identities = 97/150 (64%), Positives = 112/150 (74%), Gaps = 2/150 (1%)
Frame = +3
Query: 1 MAPKGEKKPAE--KKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNV 58
M PK EKKPA K PA KAPAEKK K P A+GDK KK+ K
Sbjct: 93 MGPKAEKKPATGGKAPA---------KAPAEKKDS---KKPV----ASGDKTKKKRKVRK 224
Query: 59 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 118
ETY YI+KVLKQVHPD GIS+KAM I+NSF+NDIFE+++ E+S+LA YNK+ TI+SREI
Sbjct: 225 ETYSSYIYKVLKQVHPDTGISNKAMSILNSFVNDIFERISGEASKLAAYNKRSTISSREI 404
Query: 119 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
QTAVRL+LPGELAKHAVSEGTKAVTK+TSS
Sbjct: 405 QTAVRLILPGELAKHAVSEGTKAVTKYTSS 494
>TC80332 similar to PIR|S11937|S11937 histone H2B - Emericella nidulans,
partial (92%)
Length = 562
Score = 160 bits (405), Expect(2) = 8e-42
Identities = 84/115 (73%), Positives = 97/115 (84%), Gaps = 2/115 (1%)
Frame = +3
Query: 36 KKLPKE--GGSAAGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDI 93
K LPK+ SA GDK KK+ K ETY YI+KVLKQVHPD GIS+KAM IMNSF+NDI
Sbjct: 96 KHLPKKKKAASAPGDKVKKK-KARKETYSSYIYKVLKQVHPDTGISNKAMSIMNSFVNDI 272
Query: 94 FEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
FE++A E+S+LA YNK+ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS
Sbjct: 273 FERIAAEASKLAAYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTSS 437
Score = 25.8 bits (55), Expect(2) = 8e-42
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 7 KKPAEKKPAEEKKSTVAEKAPAEKK 31
K AEKKPA A KAP++KK
Sbjct: 41 KAVAEKKPATTGGKAPAAKAPSKKK 115
>AL384299 PIR|T30054|HSK histone H2B [validated] - Caenorhabditis elegans,
partial (26%)
Length = 411
Score = 62.0 bits (149), Expect = 9e-11
Identities = 30/32 (93%), Positives = 32/32 (99%)
Frame = +1
Query: 117 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
EIQTAVRL+LPGELAKHAVSEGTKAVTK+TSS
Sbjct: 1 EIQTAVRLILPGELAKHAVSEGTKAVTKYTSS 96
>TC86391 similar to GP|4097571|gb|AAD09514.1| GMFP5 {Glycine max}, partial
(54%)
Length = 1353
Score = 38.9 bits (89), Expect = 8e-04
Identities = 22/39 (56%), Positives = 27/39 (68%), Gaps = 2/39 (5%)
Frame = +2
Query: 5 GEKKPAEKKPAEEK--KSTVAEKAPAEKKPKAGKKLPKE 41
G +KPAEKKP E+K + V EK P EKKP+ +K PKE
Sbjct: 341 GAEKPAEKKPDEKKPEEKKVEEKKPEEKKPE--EKKPKE 451
Score = 29.6 bits (65), Expect = 0.47
Identities = 21/54 (38%), Positives = 25/54 (45%)
Frame = +2
Query: 7 KKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
KK E KK AEK PAEKKP K K+ ++KK KK E+
Sbjct: 296 KKKVELLTPPPKKDAGAEK-PAEKKPDEKKPEEKKVEEKKPEEKKPEEKKPKES 454
Score = 28.9 bits (63), Expect = 0.80
Identities = 22/69 (31%), Positives = 33/69 (46%), Gaps = 5/69 (7%)
Frame = +2
Query: 1 MAPKGEKK-----PAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSK 55
+A K +KK P KK A +K AEK P EKKP+ K K+ ++KK +
Sbjct: 281 LAEKAKKKVELLTPPPKKDAGAEKP--AEKKPDEKKPEEKKVEEKKPEEKKPEEKKPKES 454
Query: 56 KNVETYKIY 64
V +++
Sbjct: 455 TVVMKIRLH 481
>CB893867 similar to GP|20197942|gb putative farnesylated protein
{Arabidopsis thaliana}, partial (27%)
Length = 565
Score = 38.9 bits (89), Expect = 8e-04
Identities = 22/39 (56%), Positives = 27/39 (68%), Gaps = 2/39 (5%)
Frame = +2
Query: 5 GEKKPAEKKPAEEK--KSTVAEKAPAEKKPKAGKKLPKE 41
G +KPAEKKP E+K + V EK P EKKP+ +K PKE
Sbjct: 206 GAEKPAEKKPDEKKPEEKKVEEKKPEEKKPE--EKKPKE 316
Score = 29.6 bits (65), Expect = 0.47
Identities = 21/54 (38%), Positives = 25/54 (45%)
Frame = +2
Query: 7 KKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
KK E KK AEK PAEKKP K K+ ++KK KK E+
Sbjct: 161 KKKVELLTPPPKKDAGAEK-PAEKKPDEKKPEEKKVEEKKPEEKKPEEKKPKES 319
Score = 26.9 bits (58), Expect = 3.0
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 9 PAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVETYKIY 64
P KK A +K AEK P EKKP+ K K+ ++KK + V +++
Sbjct: 185 PPPKKDAGAEKP--AEKKPDEKKPEEKKVEEKKPEEKKPEEKKPKESTVVMKIRLH 346
>BQ752218 similar to GP|19170914|emb hypothetical protein {Encephalitozoon
cuniculi}, partial (5%)
Length = 637
Score = 36.2 bits (82), Expect = 0.005
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = -2
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
K EKK AEKK EEK+ AEK E+K +A KK K+ KK++ +K+ E+
Sbjct: 510 KEEKKEAEKKAKEEKRQ--AEKKIKEEKKEAEKKAKKD--------KKEQDRKDAES 370
Score = 28.5 bits (62), Expect = 1.0
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -2
Query: 6 EKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVE 59
+K+P +K EEK AEK + + +A KK K A KK K KK E
Sbjct: 633 KKRPKKK---EEKAKKEAEKKKKKAREEAAKKAKK--AREAAYKKAKEEKKEAE 487
Score = 28.5 bits (62), Expect = 1.0
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLP--KEGGSAAGDKKKKRSKKNVETY 61
+ EKK E+K EKK EK AEKK K KK K+ SA + + SK++ +
Sbjct: 495 EAEKKAKEEKRQAEKK-IKEEKKEAEKKAKKDKKEQDRKDAESALSRQDTEDSKESKDGS 319
Query: 62 K 62
K
Sbjct: 318 K 316
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.306 0.125 0.327
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,976,966
Number of Sequences: 36976
Number of extensions: 30722
Number of successful extensions: 475
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of query: 148
length of database: 9,014,727
effective HSP length: 87
effective length of query: 61
effective length of database: 5,797,815
effective search space: 353666715
effective search space used: 353666715
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 54 (25.4 bits)
Medicago: description of AC139841.13