
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139841.10 - phase: 0
(213 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77240 homologue to GP|1370196|emb|CAA98175.1 RAB8D {Lotus japo... 381 e-106
TC77618 homologue to PIR|S57478|S57478 GTP-binding protein GTP13... 355 5e-99
TC77239 homologue to GP|1370196|emb|CAA98175.1 RAB8D {Lotus japo... 297 9e-98
TC85957 homologue to PIR|S57471|S57471 GTP-binding protein GTP6 ... 350 2e-97
TC85959 homologue to PIR|S57471|S57471 GTP-binding protein GTP6 ... 311 1e-95
TC79203 homologue to PIR|S41430|S41430 GTP-binding protein ras-... 228 1e-60
TC77446 homologue to GP|303750|dbj|BAA02116.1| GTP-binding prote... 224 2e-59
TC77453 homologue to GP|303732|dbj|BAA02117.1| GTP-binding prote... 221 1e-58
TC86827 homologue to GP|303748|dbj|BAA02115.1| GTP-binding prote... 210 4e-55
AL385573 homologue to GP|11558647|em secretion related GTPase (... 203 5e-53
TC77335 homologue to GP|1370176|emb|CAA98165.1 RAB2A {Lotus japo... 166 6e-42
TC85958 PIR|S57471|S57471 GTP-binding protein GTP6 - garden pea,... 166 8e-42
TC86480 homologue to SP|Q40193|R11C_LOTJA Ras-related protein Ra... 163 5e-41
TC87022 homologue to SP|O04486|RB1C_ARATH Ras-related protein Ra... 157 2e-39
TC88814 homologue to PIR|T06447|T06447 GTP-binding protein - gar... 154 2e-38
TC86724 homologue to PIR|T06445|T06445 GTP-binding protein - gar... 152 9e-38
TC84871 similar to GP|1370172|emb|CAA98163.1 RAB1X {Lotus japoni... 152 9e-38
TC90322 similar to GP|1370172|emb|CAA98163.1 RAB1X {Lotus japoni... 151 2e-37
TC87342 PIR|S41431|S41431 GTP-binding protein ras-like - fava b... 150 3e-37
TC82103 similar to GP|1370144|emb|CAA98178.1 RAB11B {Lotus japon... 147 4e-36
>TC77240 homologue to GP|1370196|emb|CAA98175.1 RAB8D {Lotus japonicus},
complete
Length = 1148
Score = 381 bits (978), Expect = e-106
Identities = 192/197 (97%), Positives = 195/197 (98%)
Frame = +1
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+LL+ +GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF
Sbjct: 274 LLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 453
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR
Sbjct: 454 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 633
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQ 196
AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQ
Sbjct: 634 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQ 813
Query: 197 DSATGSGQAAQKSACCG 213
DSATGSGQAAQKSACCG
Sbjct: 814 DSATGSGQAAQKSACCG 864
>TC77618 homologue to PIR|S57478|S57478 GTP-binding protein GTP13 - garden
pea, complete
Length = 1136
Score = 355 bits (912), Expect = 5e-99
Identities = 181/198 (91%), Positives = 187/198 (94%), Gaps = 1/198 (0%)
Frame = +2
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+LL+ +GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF
Sbjct: 269 LLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 448
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR
Sbjct: 449 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 628
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKIN- 195
AVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQRLADT + EP +IKIN
Sbjct: 629 AVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTVSSTEPQSIKINQ 808
Query: 196 QDSATGSGQAAQKSACCG 213
QD A GQAAQKSACCG
Sbjct: 809 QDQAANGGQAAQKSACCG 862
>TC77239 homologue to GP|1370196|emb|CAA98175.1 RAB8D {Lotus japonicus},
partial (96%)
Length = 816
Score = 297 bits (760), Expect(2) = 9e-98
Identities = 149/154 (96%), Positives = 152/154 (97%)
Frame = +1
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+LL+ +GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF
Sbjct: 247 LLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 426
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR
Sbjct: 427 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 606
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFF 170
AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFF
Sbjct: 607 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFF 708
Score = 77.0 bits (188), Expect(2) = 9e-98
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 169 FFSIARDIKQRLADTDNKAEPTTIKINQDSATGSGQAA 206
FFSIARDIKQRLADTDNKAEPTTIKINQDSATGSGQAA
Sbjct: 702 FFSIARDIKQRLADTDNKAEPTTIKINQDSATGSGQAA 815
>TC85957 homologue to PIR|S57471|S57471 GTP-binding protein GTP6 - garden
pea, complete
Length = 1148
Score = 350 bits (899), Expect = 2e-97
Identities = 175/198 (88%), Positives = 188/198 (94%), Gaps = 1/198 (0%)
Frame = +3
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+LL+ +GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF
Sbjct: 258 LLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 437
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
RTITTAYYRGAMGILLVYDVTDE+SFNNI+NWIRNIEQHASDNVNKILVGNKADMDESKR
Sbjct: 438 RTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKR 617
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQ 196
AVPTSKGQALADEYGIKFFETSAKTN+NV+EVFFSIARDIKQRLA++D+K EP T+KINQ
Sbjct: 618 AVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAESDSKTEPQTLKINQ 797
Query: 197 -DSATGSGQAAQKSACCG 213
D GS QA+Q S+CCG
Sbjct: 798 PDQGAGSAQASQTSSCCG 851
>TC85959 homologue to PIR|S57471|S57471 GTP-binding protein GTP6 - garden
pea, complete
Length = 886
Score = 311 bits (796), Expect(2) = 1e-95
Identities = 156/163 (95%), Positives = 161/163 (98%)
Frame = +3
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+LL+ +GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF
Sbjct: 123 LLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 302
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
RTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR
Sbjct: 303 RTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 482
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 179
AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ+
Sbjct: 483 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQK 611
Score = 56.2 bits (134), Expect(2) = 1e-95
Identities = 27/37 (72%), Positives = 31/37 (82%), Gaps = 1/37 (2%)
Frame = +1
Query: 178 QRLADTDNKAEPTTIKINQ-DSATGSGQAAQKSACCG 213
+RLADTD+K+EP TIKINQ D G+ QAAQKSACCG
Sbjct: 607 KRLADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCG 717
>TC79203 homologue to PIR|S41430|S41430 GTP-binding protein ras-like (clone
vfa-ypt1) - fava bean, complete
Length = 920
Score = 228 bits (582), Expect = 1e-60
Identities = 118/198 (59%), Positives = 148/198 (74%), Gaps = 2/198 (1%)
Frame = +1
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+LL+ +GVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERF
Sbjct: 238 LLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERF 417
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
RTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK D+ S+R
Sbjct: 418 RTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDL-TSER 594
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDNKAEPTTIKIN 195
AV +A ADE GI F ETSAK + NVE+ F ++A IK R+A N A P T++I
Sbjct: 595 AVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNARPPTVQIR 774
Query: 196 QDSATGSGQ-AAQKSACC 212
GQ QKS CC
Sbjct: 775 -------GQPVGQKSGCC 807
>TC77446 homologue to GP|303750|dbj|BAA02116.1| GTP-binding protein {Pisum
sativum}, complete
Length = 1080
Score = 224 bits (571), Expect = 2e-59
Identities = 111/197 (56%), Positives = 147/197 (74%), Gaps = 1/197 (0%)
Frame = +3
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+LL+ +GVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERF
Sbjct: 147 LLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERF 326
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
RTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+D+ + K+
Sbjct: 327 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLSD-KK 503
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD-NKAEPTTIKIN 195
V + +A ADE GI F ETSAK NVE+ F ++A +IK R+A N A P T++I
Sbjct: 504 VVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSARPATVQIR 683
Query: 196 QDSATGSGQAAQKSACC 212
QK+ CC
Sbjct: 684 GQPVN------QKAGCC 716
>TC77453 homologue to GP|303732|dbj|BAA02117.1| GTP-binding protein {Pisum
sativum}, complete
Length = 944
Score = 221 bits (564), Expect = 1e-58
Identities = 118/215 (54%), Positives = 154/215 (70%), Gaps = 3/215 (1%)
Frame = +1
Query: 1 FVWNILGFTININYKLILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDG 60
F ++++ + +KL LL+ +GVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DG
Sbjct: 109 FTFSVMNPEYDYLFKL-LLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDG 285
Query: 61 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNV 120
K IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNV
Sbjct: 286 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNV 465
Query: 121 NKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 180
NK+LVGNK+D+ + RAV + AD+ GI F ETSAK NVE F ++A IK R+
Sbjct: 466 NKLLVGNKSDL-TANRAVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRM 642
Query: 181 AD--TDNKAEPTTIKINQDSATGSGQ-AAQKSACC 212
A + N A P T++I GQ QKS CC
Sbjct: 643 ASQPSANNARPPTVQIR-------GQPVGQKSGCC 726
>TC86827 homologue to GP|303748|dbj|BAA02115.1| GTP-binding protein {Pisum
sativum}, complete
Length = 917
Score = 210 bits (534), Expect = 4e-55
Identities = 104/198 (52%), Positives = 147/198 (73%), Gaps = 1/198 (0%)
Frame = +2
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+L++ + VGKSCLLLRF+D S+ ++I+TIG+DFKIRT+EL+GK KLQIWDTAGQERF
Sbjct: 155 LLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIWDTAGQERF 334
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
RTIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A+ +V+K+LVGNK D+ ++K
Sbjct: 335 RTITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDLTDNK- 511
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQ 196
V T +A ADE GI F ETSAK ++NVE+ F ++A +IK ++ ++PT K
Sbjct: 512 LVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMG-----SQPTGSKSAA 676
Query: 197 DSATGSGQAAQKSA-CCG 213
+S GQ Q++ CCG
Sbjct: 677 ESVQMKGQPIQQNTNCCG 730
>AL385573 homologue to GP|11558647|em secretion related GTPase (SrgA)
{Aspergillus niger}, partial (61%)
Length = 463
Score = 203 bits (516), Expect = 5e-53
Identities = 101/119 (84%), Positives = 106/119 (88%)
Frame = +2
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+LL+ +GVGKSCLLLRFSD SFT SFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF
Sbjct: 98 LLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 277
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESK 135
RTITTAYYRGAMGILLVYDVTDE SF NIRNW NIEQHAS+ VNKIL+GNK D E K
Sbjct: 278 RTITTAYYRGAMGILLVYDVTDERSFKNIRNWFSNIEQHASEGVNKILIGNKCDWVEKK 454
>TC77335 homologue to GP|1370176|emb|CAA98165.1 RAB2A {Lotus japonicus},
complete
Length = 1121
Score = 166 bits (420), Expect = 6e-42
Identities = 91/196 (46%), Positives = 119/196 (60%), Gaps = 7/196 (3%)
Frame = +3
Query: 24 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 83
GVGKSCLLL+F+D F TIG++F R I +D K IKLQIWDTAGQE FR+IT +Y
Sbjct: 276 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSY 455
Query: 84 YRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKG 143
YRGA G LLVYD+T +FN++ +W+ + QHA+ N+ +L+GNK D+ +RAV T +G
Sbjct: 456 YRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDL-AHRRAVSTEEG 632
Query: 144 QALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDNKAEPTTIKINQDSATG 201
+ A E G+ F E SAKT NVEE F A I +++ D D E IK+ G
Sbjct: 633 EQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNESYGIKVGYGGIPG 812
Query: 202 -----SGQAAQKSACC 212
G +A CC
Sbjct: 813 PSGGRDGPSAAGGGCC 860
>TC85958 PIR|S57471|S57471 GTP-binding protein GTP6 - garden pea, partial
(59%)
Length = 646
Score = 166 bits (419), Expect = 8e-42
Identities = 88/113 (77%), Positives = 94/113 (82%), Gaps = 1/113 (0%)
Frame = +2
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
+LL+ +GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF
Sbjct: 290 LLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 469
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNW-IRNIEQHASDNVNKILVGNK 128
RTITTAYYRGAMGILLVYDVTDE F + + SDNVNKIL G +
Sbjct: 470 RTITTAYYRGAMGILLVYDVTDEVVF*QHQELDSATLSSMLSDNVNKILGGEQ 628
Score = 34.7 bits (78), Expect = 0.028
Identities = 21/38 (55%), Positives = 24/38 (62%), Gaps = 4/38 (10%)
Frame = +3
Query: 100 ASFNNIRNWIRNIEQHAS----DNVNKILVGNKADMDE 133
+SFNNI+NWIR QH + K VGNKADMDE
Sbjct: 540 SSFNNIKNWIR---QH*AACFLTMSTKY*VGNKADMDE 644
>TC86480 homologue to SP|Q40193|R11C_LOTJA Ras-related protein Rab11C.
{Lotus japonicus}, complete
Length = 1173
Score = 163 bits (412), Expect = 5e-41
Identities = 87/206 (42%), Positives = 124/206 (59%), Gaps = 10/206 (4%)
Frame = +3
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
I+L+ +GVGKS +L RF+ F +TIG++F RT++++GK +K QIWDTAGQER+
Sbjct: 237 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 416
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
R IT+AYYRGA+G LLVYD+T +F+N+ W+R + HA N+ ++ GNK+D++ R
Sbjct: 417 RAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIMMAGNKSDLNH-LR 593
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----------KQRLADTDNK 186
AV GQALA++ G+ F ETSA N+E+ F +I +I Q A T
Sbjct: 594 AVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEAAGTSLP 773
Query: 187 AEPTTIKINQDSATGSGQAAQKSACC 212
+ TTI + SA K CC
Sbjct: 774 GQGTTINVADSSAN------TKRGCC 833
>TC87022 homologue to SP|O04486|RB1C_ARATH Ras-related protein Rab11C.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (81%)
Length = 1014
Score = 157 bits (398), Expect = 2e-39
Identities = 82/201 (40%), Positives = 123/201 (60%), Gaps = 5/201 (2%)
Frame = +2
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
++L+ +GVGKS LL RF+ F +TIG++F RT++++G+ +K QIWDTAGQER+
Sbjct: 95 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERY 274
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
R IT+AYYRGA+G LLVYDVT +F+N+ W++ + HA N+ +L+GNK D+ + R
Sbjct: 275 RAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGNKTDL-KHLR 451
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI-----KQRLADTDNKAEPTT 191
AV T Q+ A++ G+ F ETSA NVE+ F + +I K+ L+ + A
Sbjct: 452 AVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTANEPAAAAN 631
Query: 192 IKINQDSATGSGQAAQKSACC 212
IK + A G + + C
Sbjct: 632 IKEGKTIAIGGSETTNTNKPC 694
>TC88814 homologue to PIR|T06447|T06447 GTP-binding protein - garden pea,
complete
Length = 1183
Score = 154 bits (390), Expect = 2e-38
Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 8/204 (3%)
Frame = +3
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
++L+ +GVGKS LL RF+ F+ +TIG++F R+I +D K +K QIWDTAGQER+
Sbjct: 330 VVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERY 509
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
R IT+AYYRGA+G LLVYDVT +F N+ W++ + H N+ +LVGNKAD+ R
Sbjct: 510 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL-RHLR 686
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI-----KQRLADTDNKAEPTT 191
AV T A A+ F ETSA ++NVE F + I K+ L D +PT
Sbjct: 687 AVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEIGD---DPTA 857
Query: 192 IKINQDSATGSG---QAAQKSACC 212
+ Q GS A +KS CC
Sbjct: 858 LPKGQTIDVGSRDDVSAVKKSGCC 929
>TC86724 homologue to PIR|T06445|T06445 GTP-binding protein - garden pea,
complete
Length = 1037
Score = 152 bits (384), Expect = 9e-38
Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 9/205 (4%)
Frame = +3
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
++L+ + VGKS +L RFS F+ +TIG++F+ RT+ +D K +K QIWDTAGQER+
Sbjct: 231 VVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERY 410
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
R +T+AYYRGA+G +LVYD+T +F++I W+ + HA N+ ILVGNK+D+ E++R
Sbjct: 411 RAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKSDL-ENQR 587
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI-----KQRLADTDNKAEPTT 191
VPT + A++ G+ F ETSA NVE F ++ +I K+ LA +++ +
Sbjct: 588 DVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKNLAADESQGNGNS 767
Query: 192 IKINQDSATGSGQA----AQKSACC 212
+ G A A+ + CC
Sbjct: 768 ASLLGQKIIIPGPAQEIPAKSNMCC 842
>TC84871 similar to GP|1370172|emb|CAA98163.1 RAB1X {Lotus japonicus},
partial (87%)
Length = 727
Score = 152 bits (384), Expect = 9e-38
Identities = 86/170 (50%), Positives = 118/170 (68%), Gaps = 2/170 (1%)
Frame = +3
Query: 11 NINYKLILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 70
+I++K ILL+ + VGKS LL+ F GS TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 129 DISFK-ILLIGDSAVGKSSLLVSFISGSVEDP-APTIGVDFKIKLLTVGGKRLKLTIWDT 302
Query: 71 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGNK 128
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ W + +E ++++ + K+LVGNK
Sbjct: 303 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCMKMLVGNK 482
Query: 129 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 178
D ES+R V T +G ALA E+G FFE SAKT NV++ F +A I +
Sbjct: 483 VDR-ESERTVSTEEGLALAKEFGCSFFECSAKTRENVDKCFEELALKIME 629
>TC90322 similar to GP|1370172|emb|CAA98163.1 RAB1X {Lotus japonicus},
partial (98%)
Length = 1054
Score = 151 bits (382), Expect = 2e-37
Identities = 83/164 (50%), Positives = 110/164 (66%), Gaps = 2/164 (1%)
Frame = +1
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
ILL+ +GVGKSCLL+ F S TIG+DFKI+ + + GKR+KL IWDTAGQERF
Sbjct: 298 ILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDTAGQERF 477
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGNKADMDES 134
RT+T++YYRGA GI+LVYDVT +F N+ W + +E ++++ K+LVGNK D D S
Sbjct: 478 RTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNKVDKD-S 654
Query: 135 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 178
+RAV +G +LA E G E SAKT NVE+ F +A I +
Sbjct: 655 ERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIME 786
>TC87342 PIR|S41431|S41431 GTP-binding protein ras-like - fava bean,
complete
Length = 995
Score = 150 bits (379), Expect = 3e-37
Identities = 82/201 (40%), Positives = 115/201 (56%), Gaps = 5/201 (2%)
Frame = +3
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
++L+ +GVGKS LL RF+ F +TIG++F RT+ +D K IK QIWDTAGQER+
Sbjct: 120 VVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERY 299
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
R IT+AYYRGA+G LLVYDVT A+F N+ W++ + H N+ +LVGNKAD+
Sbjct: 300 RAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADL-RHLV 476
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI-----KQRLADTDNKAEPTT 191
AV T G++ A++ + F ETSA NVE F + I K+ + +N
Sbjct: 477 AVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGAENGNASVP 656
Query: 192 IKINQDSATGSGQAAQKSACC 212
K + A ++ CC
Sbjct: 657 AKGEKIDLKNDVSALKRVGCC 719
>TC82103 similar to GP|1370144|emb|CAA98178.1 RAB11B {Lotus japonicus},
partial (80%)
Length = 1513
Score = 147 bits (370), Expect = 4e-36
Identities = 70/160 (43%), Positives = 107/160 (66%)
Frame = +1
Query: 17 ILLLFFAGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 76
++++ + VGK+ +L RFS F +TIG++F+ RT+ ++GK IK QIWDTAGQER+
Sbjct: 223 VVVIGDSAVGKTQILSRFSKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQERY 402
Query: 77 RTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR 136
R +T+AYYRGA+G +LVYD+T SF+++ W+ + HA +++ +LVGNK D+ + R
Sbjct: 403 RAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLVGNKGDLVD-LR 579
Query: 137 AVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 176
VPT A++ G+ F ETSA T +NVE F + +I
Sbjct: 580 MVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEI 699
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,825,536
Number of Sequences: 36976
Number of extensions: 66854
Number of successful extensions: 475
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of query: 213
length of database: 9,014,727
effective HSP length: 92
effective length of query: 121
effective length of database: 5,612,935
effective search space: 679165135
effective search space used: 679165135
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Medicago: description of AC139841.10