BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139745.3 - phase: 0 /pseudo
(330 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC91895 similar to PIR|T02003|T02003 probable DNA-binding protei... 343 7e-95
TC85800 similar to GP|11320830|dbj|BAB18313. putative WRKY DNA b... 160 8e-40
BM815074 similar to GP|13506739|gb WRKY DNA-binding protein 6 {A... 124 7e-29
TC90266 similar to SP|Q9C519|WRK6_ARATH WRKY transcription facto... 87 7e-18
TC88569 homologue to SP|Q9C519|WRK6_ARATH WRKY transcription fac... 70 9e-13
TC77278 similar to GP|11493822|gb|AAG35658.1 transcription facto... 64 1e-10
AW773655 similar to SP|Q93WT0|WR31_ Probable WRKY transcription ... 50 1e-06
TC78376 similar to SP|Q9SK33|WR60_ARATH Probable WRKY transcript... 44 1e-04
TC81065 weakly similar to GP|11320830|dbj|BAB18313. putative WRK... 38 0.006
TC82987 similar to GP|15991740|gb|AAL13047.1 WRKY transcription ... 37 0.008
TC80880 similar to SP|Q9ZQ70|WRK3_ARATH Probable WRKY transcript... 37 0.011
TC77855 similar to SP|O04336|WR21_ARATH Probable WRKY transcript... 37 0.014
TC79565 similar to SP|Q9ZQ70|WRK3_ARATH Probable WRKY transcript... 36 0.024
TC81471 similar to PIR|A84913|A84913 probable WRKY-type DNA bind... 36 0.024
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un... 35 0.031
TC80166 similar to PIR|A84913|A84913 probable WRKY-type DNA bind... 35 0.040
BG645618 similar to GP|18158619|gb WRKY-like drought-induced pro... 34 0.090
BQ751748 similar to PIR|T47216|T47 probable V-ATPase 20K chain ... 34 0.090
TC88516 similar to GP|14530681|dbj|BAB61053. WRKY DNA-binding pr... 33 0.12
AW559779 33 0.12
>TC91895 similar to PIR|T02003|T02003 probable DNA-binding protein T15B16.12
- Arabidopsis thaliana, partial (28%)
Length = 679
Score = 343 bits (879), Expect = 7e-95
Identities = 172/172 (100%), Positives = 172/172 (100%)
Frame = +3
Query: 159 TILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATM 218
TILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATM
Sbjct: 3 TILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATM 182
Query: 219 ATSTLSASQPFPTITLDFTQNHNLSMHHNRVPLPLFFSHKLPPLLQLGQPPPSSMVESVS 278
ATSTLSASQPFPTITLDFTQNHNLSMHHNRVPLPLFFSHKLPPLLQLGQPPPSSMVESVS
Sbjct: 183 ATSTLSASQPFPTITLDFTQNHNLSMHHNRVPLPLFFSHKLPPLLQLGQPPPSSMVESVS 362
Query: 279 AAISSDPNFTTALAAAISSIIGPQRSGDGNNNLAGVVPGSPQLPQSCTTFST 330
AAISSDPNFTTALAAAISSIIGPQRSGDGNNNLAGVVPGSPQLPQSCTTFST
Sbjct: 363 AAISSDPNFTTALAAAISSIIGPQRSGDGNNNLAGVVPGSPQLPQSCTTFST 518
>TC85800 similar to GP|11320830|dbj|BAB18313. putative WRKY DNA binding
protein {Oryza sativa (japonica cultivar-group)},
partial (37%)
Length = 2028
Score = 160 bits (404), Expect = 8e-40
Identities = 136/414 (32%), Positives = 181/414 (42%), Gaps = 109/414 (26%)
Frame = +1
Query: 6 AVSKEENLENSETEMSILESELRRVQEENHKLRIMLEQITKSYSQLQAQLFITLQKQKPN 65
A S EN TE++ L+ EL+R+ EN KL+ ML +T +Y+ LQ QL +QK +
Sbjct: 496 ASSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLSHVTGNYTALQLQLVALMQKN--H 669
Query: 66 HGQNM-------EENHG----MVSEQIF-LNNNNASVSD--------------------- 92
H +N E+N G MV Q + N V D
Sbjct: 670 HTENEVVNAKAEEKNQGVGGAMVPRQFLEITNGTTEVEDQVSNSSSDERTRSNTPQMRNS 849
Query: 93 ----GKQACPHD-------HPAEDSSHSSKLEEPTQDLIPFKKARVSIRARSEAPLPTIV 141
G++ P + ++ +SS + + +KARVS+RARSEA + +
Sbjct: 850 NGKTGREDSPESETQGWGPNKSQKILNSSNVADQANTEATMRKARVSVRARSEASMISDG 1029
Query: 142 ALWL*DVQF-------------------------ANRCAEDKTILITTYEGNHNHPLPPA 176
W Q RCAEDKTIL+TTYEG HNHPLPPA
Sbjct: 1030CQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPA 1209
Query: 177 ATAIAHTTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATMATSTLSASQPFPTITLDF 236
A A+A TTSAAA+MLLS S SS L+ + + + +TLSAS PFPT+TLD
Sbjct: 1210AMAMASTTSAAASMLLSGSMSSA-DGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDL 1386
Query: 237 TQNHNLS-------MHHNRVPLPLFFSHKLPPLLQLG----------------------- 266
TQN N + H +P FF + Q
Sbjct: 1387TQNSNPNPLQFQRPQHAPFHQVPSFFQGQNQNFAQAAASLYNQSKFSGLQLSQEVGSSHL 1566
Query: 267 ----------QPPPSSMVESVSAAISSDPNFTTALAAAISSIIGPQRSGDGNNN 310
QP + V + +AAI++DPNFT LAAAISSIIG + + NNN
Sbjct: 1567TTQASTQQQQQPSLADSVSAATAAITADPNFTAVLAAAISSIIGGGHANNSNNN 1728
>BM815074 similar to GP|13506739|gb WRKY DNA-binding protein 6 {Arabidopsis
thaliana}, partial (62%)
Length = 687
Score = 124 bits (310), Expect = 7e-29
Identities = 87/202 (43%), Positives = 112/202 (55%), Gaps = 28/202 (13%)
Frame = +2
Query: 137 LPTIVALWL*DVQF---ANRCAEDKTILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLS 193
+P I A WL RCAED++ILITTYEG H+HPLPPAA +A TT+AAA +LLS
Sbjct: 14 VPIIDAQWLLVAPVRKQVQRCAEDRSILITTYEGTHSHPLPPAAMPMASTTAAAATVLLS 193
Query: 194 SSTSSTLRKESATGYLSNSFPYATMATSTLSASQPFPTITLDFTQ----NHNLSMHHNRV 249
S SS L+ P + + +TLSAS PFPT+TLD T+ N+ S ++
Sbjct: 194 GSMSSA-DGVMNPNLLARILPNCSSSMATLSASAPFPTVTLDLTRDTTDNNGNSPSQFQL 370
Query: 250 PLPL-FFSHKLPPL-------------LQLGQP-------PPSSMVESVSAAISSDPNFT 288
P F S +LP + LQ+ Q P+ S+SAAI++DPNFT
Sbjct: 371 GQPQNFGSGQLPQVIAQALYNQSKFSGLQMSQDVGGSSQLHPTQQASSLSAAITADPNFT 550
Query: 289 TALAAAISSIIGPQRSGDGNNN 310
ALAAAISSIIG + N+N
Sbjct: 551 AALAAAISSIIGAAPPSNNNSN 616
>TC90266 similar to SP|Q9C519|WRK6_ARATH WRKY transcription factor 6 (WRKY
DNA-binding protein 6) (AtWRKY6). [Mouse-ear cress],
partial (15%)
Length = 1376
Score = 87.4 bits (215), Expect = 7e-18
Identities = 100/372 (26%), Positives = 160/372 (42%), Gaps = 66/372 (17%)
Frame = +2
Query: 17 ETEMSILESELRRVQEENHKLRIMLEQITKSYSQLQAQLFITLQKQKP------NHGQNM 70
+ ++ + +L ++N LR ML + + LQ +L + + + NH +
Sbjct: 11 QIQIGNIRVKLDESYKDNENLRGMLNLVNDRCNVLQNRLLLAMHMHQSSSLSQNNHNLLL 190
Query: 71 EENHGMVSEQIF---------------LNNNNASVSDGKQACPHDHPAE---DSSHSSKL 112
+EN + + NN A V + + + E + +SK+
Sbjct: 191 KENTQDAGKSVLPTRQFFDEPSPSNCSKNNGFAIVENNENNMGRNLACEYINEGEINSKI 370
Query: 113 EEPTQDLIPFKKARVSIRARSEAPLPTIVALWL*DVQFA--------------------- 151
E+ + + + ++ARVSIRARS+ W Q
Sbjct: 371 EDQSSE-VGCRRARVSIRARSDFAFMVDGCQWRKYGQKTAKGNPCPRAYYRCSMGTSCPV 547
Query: 152 ----NRCAEDKTILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSSTLRKESATG 207
RC +D+++ ITTYEGNHNH LPPAA IA+ TS+A L +S S+TL++
Sbjct: 548 RKQVQRCFKDESVFITTYEGNHNHQLPPAAKPIANLTSSALNTFLPTS-STTLQQYG--N 718
Query: 208 YLSNSF-------PYATMATSTLSASQPFPTITLDFT---QNH-NLSMHHNRVPLPLFF- 255
L+N+F P + A +T S S PTITLDFT N+ H LP F
Sbjct: 719 NLTNTFLFSSPLSPPNSNAIATFSPSPTCPTITLDFTLPPSNYLQFKNHKQSSLLPFPFQ 898
Query: 256 -----SHKLPPLLQLGQPPPSSMVESVSAAISSDPNFTTALAAAISSIIGPQRSGDGNNN 310
S ++ P + + ++V+ VS A+ DP+ AL +A+SS +GD +N
Sbjct: 899 GHYNQSFEVFPNM-INNERKLALVDVVSEALEKDPSLKEALFSAMSSF----TNGDSSN- 1060
Query: 311 LAGVVPGSPQLP 322
++ QLP
Sbjct: 1061---IINKQSQLP 1087
>TC88569 homologue to SP|Q9C519|WRK6_ARATH WRKY transcription factor 6 (WRKY
DNA-binding protein 6) (AtWRKY6). [Mouse-ear cress],
partial (21%)
Length = 1319
Score = 70.5 bits (171), Expect = 9e-13
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +1
Query: 153 RCAEDKTILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSS 198
RCAED++ILITTYEG H+HPLPPAA +A TT+AAA +LLS S SS
Sbjct: 1177 RCAEDRSILITTYEGTHSHPLPPAAMPMASTTAAAATVLLSGSMSS 1314
Score = 58.5 bits (140), Expect = 3e-09
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 29/164 (17%)
Frame = +2
Query: 1 MCSSAAVSKEENLENSETEMSILESELRRVQEENHKLRIMLEQITKSYSQLQAQLFITLQ 60
M +++ ++N + L+ EL RV EN KL+ ML + SY+ L + FI+L
Sbjct: 440 MDDRTSINAQDNKRAKTQQTDQLQEELGRVNAENQKLKDMLSDMNSSYTNLHNR-FISLM 616
Query: 61 KQKPN---------HGQNMEENHGMVSEQIFLNNNNASVSDGKQACP------HDHPAED 105
+Q+ N +G+ +E+ G+V+ + F+N A V D ++ P H P D
Sbjct: 617 QQQQNQTTEHDHIVNGKAVEKGDGVVARK-FMNGPAAEVDDQQEPEPCTPQNNHKEPDPD 793
Query: 106 SSHSSKLEEPTQ--DLIP------------FKKARVSIRARSEA 135
+S +L + +Q L P +KARVS+RARSEA
Sbjct: 794 ASELVQLLDRSQLPRLNPSNAADQANAEATMRKARVSVRARSEA 925
>TC77278 similar to GP|11493822|gb|AAG35658.1 transcription factor WRKY4
{Petroselinum crispum}, partial (40%)
Length = 1604
Score = 63.5 bits (153), Expect = 1e-10
Identities = 74/297 (24%), Positives = 123/297 (40%), Gaps = 23/297 (7%)
Frame = +2
Query: 23 LESELRRVQEENHKLRIMLEQITKSYSQLQAQLFITLQKQKP-------NHGQNMEENHG 75
LE EL+RV EN KL ML + ++Y+ L++ L + K+ P + + E ++
Sbjct: 356 LEEELKRVTLENKKLVEMLSVVCENYNTLRSHL-MEYMKRNPEKEVSTSSKKRKSESSNN 532
Query: 76 MVSEQIFLNNNNA-SVSDGKQACPHDHPAEDSSHSSKLEEP------------TQDLIPF 122
S I +NN N+ S S +++C P E+ + +K+ +D +
Sbjct: 533 NNSNLIGINNGNSESSSTDEESCKK--PREEENIKAKISRAYVRTEVSDTGLIVKDGYHW 706
Query: 123 KKARVSIRARSEAPLPTIVALWL*DVQF---ANRCAEDKTILITTYEGNHNHPLPPAATA 179
+K + + P + R +D+++L+ TYEG HNHP PP
Sbjct: 707 RKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSMLVATYEGEHNHPQPPQI-- 880
Query: 180 IAHTTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATMATSTLSASQPFPTITLDFTQN 239
STS + R + +S P + TS + +TLD T +
Sbjct: 881 --------------ESTSGSGRSVN-----HSSVPCSASLTSPAAPK----VVTLDSTTS 991
Query: 240 HNLSMHHNRVPLPLFFSHKLPPLLQLGQPPPSSMVESVSAAISSDPNFTTALAAAIS 296
N + P K P P ++VE ++ ++++DPNF AL AAIS
Sbjct: 992 KNSKDSKSIEP------RKDSP---KEAKVPKNLVEQMATSLTTDPNFRAALVAAIS 1135
>AW773655 similar to SP|Q93WT0|WR31_ Probable WRKY transcription factor 31
(WRKY DNA-binding protein 31). [Mouse-ear cress],
partial (13%)
Length = 619
Score = 50.1 bits (118), Expect = 1e-06
Identities = 62/248 (25%), Positives = 91/248 (36%), Gaps = 9/248 (3%)
Frame = +2
Query: 1 MCSSAAVSKEENLENSETEMSILESELRRVQEENHKLRIMLEQITKSYSQLQAQLFITLQ 60
M +++ ++N + L+ EL RV EN KL+ ML + SY+ L + FI+L
Sbjct: 26 MDDRTSINAQDNKRAKTQQTDQLQEELGRVNAENQKLKDMLSDMNSSYTNLHNR-FISLM 202
Query: 61 KQKPNHGQNMEENHGMVSEQIFLNNNNASVSDGKQACPHDHPAEDSSHSSKLEEPTQDLI 120
+Q+ QN H + +N DG
Sbjct: 203 QQQ----QNQTTEHDHI-----VNGKAVEKGDG--------------------------- 274
Query: 121 PFKKARVSIRARSEAPLPTIVALWL*DVQFANRCAEDKTILITTYEGNHNHPLPPAATAI 180
V R P + D Q C T + NH P P A+ +
Sbjct: 275 ------VVARKFMNGPAAEVD-----DQQEPEPC---------TPQNNHKEPDPDASELV 394
Query: 181 AH---------TTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATMATSTLSASQPFPT 231
S AA +LLS S SS + L+ P + + +TLSAS PFPT
Sbjct: 395 QLLDRSQLPRLNPSNAATVLLSGSMSSADGVMNPN-LLARILPNCSSSMATLSASAPFPT 571
Query: 232 ITLDFTQN 239
+TLD T++
Sbjct: 572 VTLDLTRD 595
>TC78376 similar to SP|Q9SK33|WR60_ARATH Probable WRKY transcription factor
60 (WRKY DNA-binding protein 60). [Mouse-ear cress],
partial (38%)
Length = 1121
Score = 43.5 bits (101), Expect = 1e-04
Identities = 41/147 (27%), Positives = 58/147 (38%)
Frame = +1
Query: 153 RCAEDKTILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSSTLRKESATGYLSNS 212
R ED+ +L+TTYEG HNH H + S T+ T A+ S+
Sbjct: 709 RSVEDQNVLVTTYEGEHNH--------AHHQPEMSLTSSNQSETTPTYNLVPASS--SSP 858
Query: 213 FPYATMATSTLSASQPFPTITLDFTQNHNLSMHHNRVPLPLFFSHKLPPLLQLGQPPPSS 272
+ T S L QP + D SHK + QL
Sbjct: 859 INWRTAQASKLDLVQPRQLVVDD--------------------SHK-SSIQQL------- 954
Query: 273 MVESVSAAISSDPNFTTALAAAISSII 299
+V+ ++ +++ DPNF ALA AIS I
Sbjct: 955 LVQQMATSLTRDPNFAAALATAISGRI 1035
>TC81065 weakly similar to GP|11320830|dbj|BAB18313. putative WRKY DNA
binding protein {Oryza sativa (japonica
cultivar-group)}, partial (4%)
Length = 828
Score = 37.7 bits (86), Expect = 0.006
Identities = 18/42 (42%), Positives = 27/42 (63%)
Frame = +1
Query: 272 SMVESVSAAISSDPNFTTALAAAISSIIGPQRSGDGNNNLAG 313
S + + + AI++DP F +ALAAA+SS+IG + N AG
Sbjct: 319 STISAATKAITADPTFQSALAAALSSLIGNTTNQGNQNQSAG 444
>TC82987 similar to GP|15991740|gb|AAL13047.1 WRKY transcription factor 71
{Arabidopsis thaliana}, partial (33%)
Length = 975
Score = 37.4 bits (85), Expect = 0.008
Identities = 21/45 (46%), Positives = 27/45 (59%)
Frame = +1
Query: 153 RCAEDKTILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTS 197
R +D +I++TTYEG HNH P A A++MLLSSS S
Sbjct: 793 RSYQDPSIVMTTYEGQHNHHCP------ATLRGNASSMLLSSSPS 909
>TC80880 similar to SP|Q9ZQ70|WRK3_ARATH Probable WRKY transcription factor
3 (WRKY DNA-binding protein 3). [Mouse-ear cress],
partial (24%)
Length = 907
Score = 37.0 bits (84), Expect = 0.011
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 153 RCAEDKTILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSS 198
R + D +ITTYEG HNH +P A T + A+ L S +T S
Sbjct: 350 RASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLKSQNTIS 487
>TC77855 similar to SP|O04336|WR21_ARATH Probable WRKY transcription factor 21
(WRKY DNA-binding protein 21). [Mouse-ear cress], partial
(38%)
Length = 1507
Score = 36.6 bits (83), Expect = 0.014
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 153 RCAEDKTILITTYEGNHNHPLPPAATAIAHTT 184
RC ++ T+L+ TYEG HNH P A A TT
Sbjct: 1139 RCLDEPTMLMVTYEGEHNHAKVPTQPANA*TT 1234
>TC79565 similar to SP|Q9ZQ70|WRK3_ARATH Probable WRKY transcription factor 3
(WRKY DNA-binding protein 3). [Mouse-ear cress], partial
(35%)
Length = 1602
Score = 35.8 bits (81), Expect = 0.024
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 153 RCAEDKTILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSSTLRKESATGYLSN 211
R + D ++TTYEG HNH +P A T +H L S++++S L+ ++A + N
Sbjct: 1187 RVSTDPKAVLTTYEGKHNHDVPAAKTN-SHN-------LASNNSASQLKSQNAIPEMQN 1339
>TC81471 similar to PIR|A84913|A84913 probable WRKY-type DNA binding protein
[imported] - Arabidopsis thaliana, partial (43%)
Length = 1274
Score = 35.8 bits (81), Expect = 0.024
Identities = 22/84 (26%), Positives = 37/84 (43%), Gaps = 7/84 (8%)
Frame = +2
Query: 153 RCAEDKTILITTYEGNHNHPLPP------AATAIAHTTSAAAAMLLSSSTSSTLRKESAT 206
R D +I++TTYEG H HP P A I + +++ S L+ +
Sbjct: 671 RSYTDPSIVVTTYEGQHTHPSPTMSRSAFAGVQIPQPAGVVSGGFSTTNFGSVLQGNYLS 850
Query: 207 GYLSNSFPYATMATSTLSA-SQPF 229
Y + + + +TLS+ S P+
Sbjct: 851 QYHQQPYQHQQLLVNTLSSLSHPY 922
>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
protein {Arabidopsis thaliana}, partial (46%)
Length = 2077
Score = 35.4 bits (80), Expect = 0.031
Identities = 34/142 (23%), Positives = 69/142 (47%), Gaps = 4/142 (2%)
Frame = -2
Query: 173 LPPAATA-IAHTTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATMATSTLSASQPFPT 231
LPP ++ + S+A++ SSS+SS+ ++ + S+S +++++S S S PF
Sbjct: 804 LPPKKSSYLTFPISSASSSSSSSSSSSSSSISNSPAFSSSSS--SSLSSSASSLSSPFS* 631
Query: 232 ITLDFTQ---NHNLSMHHNRVPLPLFFSHKLPPLLQLGQPPPSSMVESVSAAISSDPNFT 288
++ F++ N ++ + + +P PL FS SS + S S++ SS + +
Sbjct: 630 LSSSFSKYSVNSSIFKNLSSIPPPLTFSFS-------SSSSSSSSLPSSSSSSSSSKSSS 472
Query: 289 TALAAAISSIIGPQRSGDGNNN 310
+L P +S ++N
Sbjct: 471 PSLPPFAFFFSTPSKSSSSSSN 406
Score = 31.2 bits (69), Expect = 0.58
Identities = 21/78 (26%), Positives = 39/78 (49%)
Frame = -2
Query: 173 LPPAATAIAHTTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATMATSTLSASQPFPTI 232
+PP T ++S++++ L SSS+SS+ K S+ +F ++T + S+ S+S
Sbjct: 570 IPPPLTFSFSSSSSSSSSLPSSSSSSSSSKSSSPSLPPFAFFFSTPSKSSSSSSNSSSKS 391
Query: 233 TLDFTQNHNLSMHHNRVP 250
+L + N N P
Sbjct: 390 SLSSSSNSTRFFFSNFFP 337
>TC80166 similar to PIR|A84913|A84913 probable WRKY-type DNA binding protein
[imported] - Arabidopsis thaliana, partial (24%)
Length = 829
Score = 35.0 bits (79), Expect = 0.040
Identities = 19/56 (33%), Positives = 26/56 (45%)
Frame = +1
Query: 153 RCAEDKTILITTYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSSTLRKESATGY 208
R D TI++TTYEG H HP P ++ +++ A LL T S Y
Sbjct: 289 RSLSDPTIVVTTYEGKHTHPNP----IMSRSSAVRAGSLLPPPAECTTNFASDQNY 444
>BG645618 similar to GP|18158619|gb WRKY-like drought-induced protein {Retama
raetam}, partial (37%)
Length = 747
Score = 33.9 bits (76), Expect = 0.090
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -1
Query: 153 RCAEDKTILITTYEGNHNHPLPPAATA----IAHTTS 185
R + D +ITTYEG HNH +P A ++ H TS
Sbjct: 270 RASHDPKAVITTYEGKHNHDVPAARSSSHDMAGHATS 160
>BQ751748 similar to PIR|T47216|T47 probable V-ATPase 20K chain [imported] -
Neurospora crassa, partial (82%)
Length = 642
Score = 33.9 bits (76), Expect = 0.090
Identities = 32/124 (25%), Positives = 58/124 (45%)
Frame = -1
Query: 174 PPAATAIAHTTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATMATSTLSASQPFPTIT 233
PPA+TAI+ +TS+ ++ S +S TL S++ S A ++S +S++ P T+
Sbjct: 531 PPASTAISVSTSSPSSSTRSPPSSPTLPPASSSRPCS-----APSSSSIVSSTSPMVTL- 370
Query: 234 LDFTQNHNLSMHHNRVPLPLFFSHKLPPLLQLGQPPPSSMVESVSAAISSDPNFTTALAA 293
+ P P+ S P L P S+ + + A S+ + TT +A+
Sbjct: 369 -------------SP*PRPVTSSRACPSLTSPTSGPASTAPSTPAVAASASSS*TTPVAS 229
Query: 294 AISS 297
+ S+
Sbjct: 228 SPST 217
>TC88516 similar to GP|14530681|dbj|BAB61053. WRKY DNA-binding protein
{Nicotiana tabacum}, partial (17%)
Length = 1085
Score = 33.5 bits (75), Expect = 0.12
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 153 RCAEDKTILITTYEGNHNHPLPPA 176
R A D +ITTYEG HNH +P A
Sbjct: 398 RAAHDIKAVITTYEGKHNHDVPAA 469
>AW559779
Length = 504
Score = 33.5 bits (75), Expect = 0.12
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 4/142 (2%)
Frame = +2
Query: 164 TYEGNHNHPLPPAATAIAHTTSAAAAMLLSSSTSSTLRKESATGYLSNSFPYATMATSTL 223
T N + PL T I +T +SS+ S L ++N+ P T+ + +
Sbjct: 92 TISSNISKPL----TTITNTNPLETIKSISSNILSPLTT------ITNTTPLETIKSISS 241
Query: 224 SASQPFPTITLDFTQNHNLSMHHNRVPLPLF---FSHKLPPLLQLGQPPPSSMVESVSAA 280
+ S P TI N PL F SH PL+ + P ++S+S+
Sbjct: 242 NISSPLSTII-------------NTTPLETFNTISSHISSPLITIKNANPLETIKSISSN 382
Query: 281 ISSD-PNFTTALAAAISSIIGP 301
ISS T +L +++++ P
Sbjct: 383 ISSPLTTITNSLVNPLNNLVNP 448
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.126 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,560,037
Number of Sequences: 36976
Number of extensions: 165460
Number of successful extensions: 1303
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of query: 330
length of database: 9,014,727
effective HSP length: 96
effective length of query: 234
effective length of database: 5,465,031
effective search space: 1278817254
effective search space used: 1278817254
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Medicago: description of AC139745.3