BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139744.2 - phase: 0 /pseudo
(1366 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BQ141148 homologue to EGAD|147836|157 hypothetical protein 87B1.... 60 4e-09
TC77416 similar to GP|18139887|gb|AAL60196.1 O-linked N-acetyl g... 57 4e-08
BG644345 weakly similar to GP|19697333|gb putative protein poten... 54 5e-07
TC79570 similar to PIR|F86427|F86427 auxin response factor 6 (AR... 54 5e-07
TC89480 similar to GP|20260684|gb|AAM13240.1 unknown protein {Ar... 52 2e-06
TC93379 similar to GP|19569994|gb|AAL92295.1 hypothetical protei... 48 3e-05
TC86018 similar to GP|19423939|gb|AAL87312.1 putative RNA helica... 47 5e-05
TC86022 homologue to GP|19423939|gb|AAL87312.1 putative RNA heli... 47 7e-05
TC81438 similar to GP|20259253|gb|AAM14362.1 unknown protein {Ar... 45 1e-04
TC92466 similar to GP|11141605|gb|AAG32022.1 LEUNIG {Arabidopsis... 45 2e-04
BG648523 similar to GP|9955540|emb| putative protein {Arabidopsi... 44 4e-04
TC92578 similar to GP|10177072|dbj|BAB10514. contains similarity... 43 7e-04
TC80284 similar to PIR|T04740|T04740 hypothetical protein F6G17.... 43 7e-04
TC79752 similar to GP|11994670|dbj|BAB02898. gene_id:K7P8.17~unk... 42 0.002
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy... 41 0.003
TC80581 similar to GP|19683021|gb|AAL92644.1 hypothetical protei... 41 0.004
TC92109 similar to GP|19683031|gb|AAL92653.1 HYPOTHETICAL 31.4 K... 40 0.005
TC80931 similar to GP|14190783|gb|AAF65166.2 putative phloem tra... 40 0.006
TC85969 similar to GP|21553908|gb|AAM62991.1 unknown {Arabidopsi... 39 0.011
BG647317 similar to GP|18033922|gb| SEUSS transcriptional co-reg... 39 0.014
>BQ141148 homologue to EGAD|147836|157 hypothetical protein 87B1.h
{Drosophila melanogaster}, partial (4%)
Length = 485
Score = 60.5 bits (145), Expect = 4e-09
Identities = 50/152 (32%), Positives = 64/152 (41%), Gaps = 10/152 (6%)
Frame = +3
Query: 363 NGGAVP---PPPYPGAVPGAGPNAKRFKPNG-----EVDNGMVGAAGMGHARPPQAQPQQ 414
NGG P PP +P A G GPN + P G NG V AG P P
Sbjct: 30 NGGMHPQGLPPGHPMA--GGGPNPGQHMPPGMHPGVSGPNGPVSQAGPMMGMQPGMGPNA 203
Query: 415 PPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLH 474
+L QQ Q+ Q Q H +NP QQ + Q H + QQ QQQ+ QQQ +
Sbjct: 204 HALSHLQPQQAQMFQQQQQHPGMMNPAMMQQQRSAQQHAFMRQQQQQQMLAQQQGGMGM- 380
Query: 475 AGVSPV--QQPGQVARPPQQSLQQPSVKSCPP 504
+P+ P Q+ + Q + Q S PP
Sbjct: 381 GFPNPMGGMTPHQLQQLRAQQMGQXSFVQLPP 476
>TC77416 similar to GP|18139887|gb|AAL60196.1 O-linked N-acetyl glucosamine
transferase {Arabidopsis thaliana}, partial (94%)
Length = 3465
Score = 57.4 bits (137), Expect = 4e-08
Identities = 54/234 (23%), Positives = 102/234 (43%)
Frame = +2
Query: 19 FCRAVRAFQQVLYVDPVFQRANEVHLRLGLMFKVNNDPESALKHLKLSYVDASPSTFCKL 78
F RA++ +++ + + P F A +L LG ++K P+ A+ Y A +
Sbjct: 947 FNRALQYYKEAVKLKPSFPDA---YLNLGNVYKALGMPQEAIA----CYQHALQTRPNYG 1105
Query: 79 EIQFHIAHLYEVQKKHKLAKELYEQLLKEKDLPLHLKADIYRQLGWMYHNVEAFGSKTER 138
++A ++ Q + +A Y+Q + P L+A Y+N+ R
Sbjct: 1106 MAYGNLASIHYEQGQLDMAILHYKQAIACD--PRFLEA---------YNNLGNALKDVGR 1252
Query: 139 MTLAIRCLEKSLEADRNSGQTLYLLGRCYASIGKADHAFDAYRNVVEKTTPTADVWCSIG 198
+ AI+C + L N Q L LG Y A Y+ + TT + + ++
Sbjct: 1253 VEEAIQCYNQCLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLA 1432
Query: 199 VLYQQQKQYVDALQAYVCAVQLDKCHSASWINLGILYESCSQLKDALACYIHSV 252
++Y+QQ Y DA+ Y +++D + +N G Y+ ++ DA+ YI ++
Sbjct: 1433 IIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAI 1594
Score = 51.2 bits (121), Expect = 3e-06
Identities = 31/139 (22%), Positives = 63/139 (45%)
Frame = +2
Query: 126 YHNVEAFGSKTERMTLAIRCLEKSLEADRNSGQTLYLLGRCYASIGKADHAFDAYRNVVE 185
+ N+ + + R+T A +C ++L + LG + G A+ Y +
Sbjct: 704 WSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLMKAQGLVQEAYSCYLEALR 883
Query: 186 KTTPTADVWCSIGVLYQQQKQYVDALQAYVCAVQLDKCHSASWINLGILYESCSQLKDAL 245
A W ++ L+ + + ALQ Y AV+L +++NLG +Y++ ++A+
Sbjct: 884 IQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAI 1063
Query: 246 ACYIHSVRASKDKAAGVGS 264
ACY H+++ + G+
Sbjct: 1064ACYQHALQTRPNYGMAYGN 1120
Score = 47.4 bits (111), Expect = 4e-05
Identities = 33/151 (21%), Positives = 60/151 (38%), Gaps = 1/151 (0%)
Frame = +2
Query: 123 GWMYHNVEAFGSKTERMTLAIRCLEKSLEADRNSGQTLYLLGRCYASIGKADHAFDAYRN 182
G Y N+ + + ++ +AI ++++ D + LG +G+ + A Y
Sbjct: 1103 GMAYGNLASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQ 1282
Query: 183 VVEKTTPTADVWCSIGVLYQQQKQYVDALQAYVCAVQLDKCHSASWINLGILYESCSQLK 242
+ ++G +Y + A Y + + SA + NL I+Y+
Sbjct: 1283 CLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGNYA 1462
Query: 243 DALACYIHSVRASKDKAAG-VGSGTTSSESG 272
DA++CY +R A G V G T E G
Sbjct: 1463 DAISCYNEVLRIDPLAADGLVNRGNTYKEIG 1555
Score = 42.0 bits (97), Expect = 0.002
Identities = 42/204 (20%), Positives = 87/204 (42%)
Frame = +2
Query: 50 FKVNNDPESALKHLKLSYVDASPSTFCKLEIQFHIAHLYEVQKKHKLAKELYEQLLKEKD 109
F V +P S L L + A+ S+ ++ +AH +K A E + + E++
Sbjct: 317 FAVKQEPSS----LTLLPLRANDSSEVDEDLHLTLAHQMYKSGSYKKALE-HSNTVYERN 481
Query: 110 LPLHLKADIYRQLGWMYHNVEAFGSKTERMTLAIRCLEKSLEADRNSGQTLYLLGRCYAS 169
L+ D LG +Y+ + F + + E++L + + + + +
Sbjct: 482 ---PLRTDNLLLLGAIYYQLHDFD-------MCVAKNEEALRIEPHFAECYGNMANAWKE 631
Query: 170 IGKADHAFDAYRNVVEKTTPTADVWCSIGVLYQQQKQYVDALQAYVCAVQLDKCHSASWI 229
G D A Y +E AD W ++ Y ++ + +A Q A+ ++ +
Sbjct: 632 KGNIDLAIRYYLIAIELRPNFADAWSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHS 811
Query: 230 NLGILYESCSQLKDALACYIHSVR 253
NLG L ++ +++A +CY+ ++R
Sbjct: 812 NLGNLMKAQGLVQEAYSCYLEALR 883
>BG644345 weakly similar to GP|19697333|gb putative protein potential
transcriptional repressor Not4hp - Mus musculus, partial
(7%)
Length = 635
Score = 53.5 bits (127), Expect = 5e-07
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Frame = +1
Query: 383 AKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPP-------PYYLNQQQLQLLQYYQSHV 435
A F+ G+ + G A P Q QQ P P+ QQQLQ Q Q
Sbjct: 184 ASPFQTPGQQQSSPFQTPGQQQASPFQTPGQQQPSPFSQITPFSQQQQQLQFQQQQQQQQ 363
Query: 436 ESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQ 482
+ L QQ+QQ+QQ QQQL++QQQQQQ L S QQ
Sbjct: 364 QQLQQQQQQQLQQ-----------QQQLQLQQQQQQLLQQHQSSQQQ 471
Score = 31.6 bits (70), Expect = 2.2
Identities = 27/84 (32%), Positives = 37/84 (43%)
Frame = +1
Query: 413 QQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQ 472
QQ P+ QQ Q + + +P Q QQ ++ QQQ ++Q QQQQQ
Sbjct: 178 QQASPFQTPGQQ-QSSPFQTPGQQQASPFQTPGQQQPSPFSQITPFSQQQQQLQFQQQQQ 354
Query: 473 LHAGVSPVQQPGQVARPPQQSLQQ 496
QQ Q+ + QQ LQQ
Sbjct: 355 --------QQQQQLQQQQQQQLQQ 402
Score = 30.4 bits (67), Expect = 4.9
Identities = 35/118 (29%), Positives = 45/118 (37%), Gaps = 2/118 (1%)
Frame = +1
Query: 381 PNAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNP 440
P A F P + + + G A P Q QQ + Q Q S ++
Sbjct: 115 PMAFTFTPQAQQPS-LFQTPGQQQASPFQTPGQQQSSPFQTPGQQQA-----SPFQTPGQ 276
Query: 441 QQRQQMQQFQHHYRLMQQHQQQLRMQQQQQ--QQLHAGVSPVQQPGQVARPPQQSLQQ 496
QQ Q + QQ Q Q + QQQQQ QQ QQ Q+ + QQ LQQ
Sbjct: 277 QQPSPFSQITPFSQQQQQLQFQQQQQQQQQQLQQQQQQQLQQQQQLQLQQQQQQLLQQ 450
>TC79570 similar to PIR|F86427|F86427 auxin response factor 6 (ARF6)
[imported] - Arabidopsis thaliana, partial (15%)
Length = 1143
Score = 53.5 bits (127), Expect = 5e-07
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 392 VDNGMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQ-LLQYYQSHVESLNPQQRQQMQQFQ 450
+ N M+ + A P + Q P QQ Q LLQ+ S Q+QQ QQ Q
Sbjct: 422 MQNQMLQQSQPHQAFPKNQESQHPSQSQAQTQQFQQLLQHQHSFTNQNYHMQQQQQQQQQ 601
Query: 451 HHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVKSCPPQAV 507
+ QQHQQQ + Q QQQQQ+ V Q V+ Q PS + P QA+
Sbjct: 602 QQQQQQQQHQQQQQQQSQQQQQV---VDHQQMSNAVSTMSQFVSAPPSQSTQPMQAI 763
Score = 40.8 bits (94), Expect = 0.004
Identities = 35/104 (33%), Positives = 44/104 (41%), Gaps = 9/104 (8%)
Frame = +2
Query: 423 QQLQLLQYYQSHVESLNP-------QQRQQMQQFQHHYRLMQQH--QQQLRMQQQQQQQL 473
QQ Q Q + + ES +P QQ QQ+ Q QH + H QQQ + QQQQQQQ
Sbjct: 440 QQSQPHQAFPKNQESQHPSQSQAQTQQFQQLLQHQHSFTNQNYHMQQQQQQQQQQQQQQQ 619
Query: 474 HAGVSPVQQPGQVARPPQQSLQQPSVKSCPPQAVHIPFSFLSTP 517
QQ Q + Q + S Q V P S + P
Sbjct: 620 QQHQQQQQQQSQQQQQVVDHQQMSNAVSTMSQFVSAPPSQSTQP 751
Score = 39.7 bits (91), Expect = 0.008
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Frame = +2
Query: 405 ARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLR 464
++P QA P+ + +Q Q Q Q+ Q L Q Q H + QQ QQQ +
Sbjct: 446 SQPHQAFPKNQESQHPSQSQAQTQQFQQ-----LLQHQHSFTNQNYHMQQQQQQQQQQQQ 610
Query: 465 MQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVK---SCPPQAVHIPFSFLST 516
QQQQ QQ S QQ QV Q S ++ S PP P +S+
Sbjct: 611 QQQQQHQQQQQQQS--QQQQQVVDHQQMSNAVSTMSQFVSAPPSQSTQPMQAISS 769
>TC89480 similar to GP|20260684|gb|AAM13240.1 unknown protein {Arabidopsis
thaliana}, partial (43%)
Length = 1068
Score = 51.6 bits (122), Expect = 2e-06
Identities = 32/77 (41%), Positives = 42/77 (53%), Gaps = 7/77 (9%)
Frame = +1
Query: 409 QAQPQQPPPYYL-------NQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQ 461
Q+Q Q P YL +QQQ Q Q Q+ QQ+QQ+ Q Q R++QQ QQ
Sbjct: 130 QSQSNQDPNLYLQQQQQFLHQQQQQPFQQSQTTQSQFQQQQQQQLYQQQQQQRILQQQQQ 309
Query: 462 QLRMQQQQQQQLHAGVS 478
QL+ Q QQQQ LH ++
Sbjct: 310 QLQ-QPQQQQNLHQSLA 357
Score = 33.5 bits (75), Expect = 0.58
Identities = 29/91 (31%), Positives = 37/91 (39%), Gaps = 14/91 (15%)
Frame = +1
Query: 439 NPQ-QRQQMQQFQHHYRLMQQHQQQLRMQQQQ-------------QQQLHAGVSPVQQPG 484
NPQ Q Q Q L Q QQQ QQQQ QQQ + QQ
Sbjct: 106 NPQIQSQSQSQSNQDPNLYLQQQQQFLHQQQQQPFQQSQTTQSQFQQQQQQQLYQQQQQQ 285
Query: 485 QVARPPQQSLQQPSVKSCPPQAVHIPFSFLS 515
++ + QQ LQQP + Q++ F L+
Sbjct: 286 RILQQQQQQLQQPQQQQNLHQSLASHFHLLN 378
>TC93379 similar to GP|19569994|gb|AAL92295.1 hypothetical protein
{Dictyostelium discoideum}, partial (1%)
Length = 535
Score = 47.8 bits (112), Expect = 3e-05
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 418 YYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQ-QQQQLHAG 476
YY QQ+Q Y+Q QQ QQ QQ Q + +M Q QQQ +MQQQ QQQQ+ G
Sbjct: 68 YYQGMQQMQPNPYHQQQ------QQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQG 229
Score = 44.3 bits (103), Expect = 3e-04
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +2
Query: 399 AAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQ 458
AA M Q QP PY+ QQQ Q Q Q ++ + QQ+QQ Q Q L QQ
Sbjct: 47 AAAMNGGYYQGMQQMQPNPYHQQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQ----LQQQ 214
Query: 459 HQQQLRMQQQ-QQQQLHAGVSPVQQPGQVARPPQQS 493
QQ M Q ++ G P + PP S
Sbjct: 215 QMQQGNMNNMYPQHMMYGGGRPHPSMNYMGPPPMPS 322
Score = 37.0 bits (84), Expect = 0.052
Identities = 24/65 (36%), Positives = 33/65 (49%)
Frame = +2
Query: 441 QQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVK 500
Q QQMQ +H Q QQQ + QQQQQQ + + QQ + QQ +QQ ++
Sbjct: 74 QGMQQMQPNPYH-----QQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMN 238
Query: 501 SCPPQ 505
+ PQ
Sbjct: 239 NMYPQ 253
>TC86018 similar to GP|19423939|gb|AAL87312.1 putative RNA helicase
{Arabidopsis thaliana}, partial (12%)
Length = 885
Score = 47.0 bits (110), Expect = 5e-05
Identities = 34/89 (38%), Positives = 41/89 (45%)
Frame = +1
Query: 382 NAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQ 441
N R+ P + G G + A QQ P Y QQQ QY Q H L
Sbjct: 463 NRGRYPPGIGLGRGSGGGGLNSNPNNANAGFQQRPHY---QQQ----QYVQRH---LMQN 612
Query: 442 QRQQMQQFQHHYRLMQQHQQQLRMQQQQQ 470
Q Q Q +QHH + QQ+QQQ + QQQQQ
Sbjct: 613 QNQHQQHYQHHQQNQQQYQQQNQQQQQQQ 699
Score = 37.4 bits (85), Expect = 0.040
Identities = 33/100 (33%), Positives = 41/100 (41%)
Frame = +1
Query: 370 PPYPGAVPGAGPNAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQ 429
PP G G+G PN A G + P Q QQ +L Q Q Q Q
Sbjct: 478 PPGIGLGRGSGGGGLNSNPNN---------ANAGFQQRPHYQQQQYVQRHLMQNQNQHQQ 630
Query: 430 YYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQ 469
+YQ H QQ QQ Q Q+ QQ QQQ +++ Q
Sbjct: 631 HYQHH------QQNQQQYQQQN-----QQQQQQQWLRRNQ 717
>TC86022 homologue to GP|19423939|gb|AAL87312.1 putative RNA helicase
{Arabidopsis thaliana}, partial (89%)
Length = 1982
Score = 46.6 bits (109), Expect = 7e-05
Identities = 33/92 (35%), Positives = 40/92 (42%)
Frame = +2
Query: 382 NAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQ 441
N R+ P + G G G G QQ P + QQQ QY Q H+
Sbjct: 89 NRGRYPPGIGLGRGGSGGGGGGLTSNSNTGFQQRPHHQYQQQQ----QYVQRHM------ 238
Query: 442 QRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQL 473
Q Q HY+ QQ+QQQ + QQQQQQ L
Sbjct: 239 ---MQNQHQQHYQNQQQNQQQNQQQQQQQQWL 325
>TC81438 similar to GP|20259253|gb|AAM14362.1 unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 1334
Score = 45.4 bits (106), Expect = 1e-04
Identities = 36/91 (39%), Positives = 42/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 410 AQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQ 469
A P + + QQQL Q + +LN QQ Q Q Q Q HQQQ QQQQ
Sbjct: 62 ASPLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQ 241
Query: 470 QQQLHAGVSPVQQPG-QVARPPQQSLQQPSV 499
QQQL + P QQ Q + QQ L P V
Sbjct: 242 QQQL---LQPQQQSQLQASVHQQQHLHSPRV 325
Score = 30.0 bits (66), Expect = 6.4
Identities = 23/58 (39%), Positives = 26/58 (44%)
Frame = +2
Query: 408 PQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRM 465
PQ QQP P QQQ QLLQ PQQ+ Q+Q H QQH R+
Sbjct: 200 PQLHQQQPSPQ--QQQQQQLLQ----------PQQQSQLQASVH----QQQHLHSPRV 325
>TC92466 similar to GP|11141605|gb|AAG32022.1 LEUNIG {Arabidopsis thaliana},
partial (14%)
Length = 632
Score = 45.1 bits (105), Expect = 2e-04
Identities = 30/71 (42%), Positives = 35/71 (49%)
Frame = +1
Query: 422 QQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQ 481
QQQ Q Q Q + Q+QQ Q Q LMQ+H QQ + QQQ QQQ P
Sbjct: 373 QQQQQQQQQQQPQPQQSQHAQQQQQQHMQMQQLLMQRHAQQQQQQQQHQQQ------PQS 534
Query: 482 QPGQVARPPQQ 492
QP Q +P QQ
Sbjct: 535 QP-QQPQPQQQ 564
Score = 40.4 bits (93), Expect = 0.005
Identities = 31/79 (39%), Positives = 38/79 (47%), Gaps = 6/79 (7%)
Frame = +1
Query: 424 QLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQ--QLRMQ----QQQQQQLHAGV 477
+L L+ + + QQ+ Q QQ QH + QQH Q QL MQ QQQQQQ H
Sbjct: 346 RLN*LKAREQQQQQQQQQQQPQPQQSQHAQQQQQQHMQMQQLLMQRHAQQQQQQQQHQ-- 519
Query: 478 SPVQQPGQVARPPQQSLQQ 496
QQP + PQ QQ
Sbjct: 520 ---QQPQSQPQQPQPQQQQ 567
Score = 40.0 bits (92), Expect = 0.006
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +1
Query: 409 QAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQ 468
Q Q QQP P Q Q Q+ Q + +QQ QQ QH + Q QQ QQQ
Sbjct: 388 QQQQQQPQPQQSQHAQQQQQQHMQMQQLLMQRHAQQQQQQQQHQQQPQSQPQQPQPQQQQ 567
Query: 469 QQQQLH 474
+ + H
Sbjct: 568 NRDRTH 585
Score = 39.3 bits (90), Expect = 0.011
Identities = 24/72 (33%), Positives = 34/72 (46%)
Frame = +1
Query: 434 HVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQS 493
H+ LN + ++ QQ Q + Q QQ QQQQQQ + +Q+ Q + QQ
Sbjct: 337 HI*RLN*LKAREQQQQQQQQQQQPQPQQSQHAQQQQQQHMQMQQLLMQRHAQQQQQQQQH 516
Query: 494 LQQPSVKSCPPQ 505
QQP + PQ
Sbjct: 517 QQQPQSQPQQPQ 552
>BG648523 similar to GP|9955540|emb| putative protein {Arabidopsis thaliana},
partial (9%)
Length = 770
Score = 43.9 bits (102), Expect = 4e-04
Identities = 44/156 (28%), Positives = 58/156 (36%), Gaps = 17/156 (10%)
Frame = +3
Query: 354 KPNHYVNGVNGGAVPPPPYPGAVPG-----AGPNAKRFKPNGEVDNGMVGAAGMGHARP- 407
+ + Y NG+ G A P G VPG GP P G + G+G A P
Sbjct: 165 RDSRYNNGIQGYA-EQNPVAGRVPGHFVMPEGPTTPGPFPPGLMTRNEGTIPGVGVAMPL 341
Query: 408 -------PQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQ----FQHHYRLM 456
Q + +QP P + L H LNP Q+Q QQ H + +
Sbjct: 342 SIPSFDGSQGEQKQPHPGSIGAPPLPP----GPHPSLLNPNQQQPFQQNPQQIPQHQQQL 509
Query: 457 QQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQ 492
QQH L M Q H+ S + + RPP Q
Sbjct: 510 QQHMGPLPMPPNMPQIQHSSHSSMLPHQHLPRPPPQ 617
>TC92578 similar to GP|10177072|dbj|BAB10514. contains similarity to unknown
protein~dbj|BAA91048.1~gene_id:MKP11.12 {Arabidopsis
thaliana}, partial (36%)
Length = 1126
Score = 43.1 bits (100), Expect = 7e-04
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 1/184 (0%)
Frame = +3
Query: 75 FCKLEIQFHIAHLYEVQKKHKLAKELYEQLLKEKDLPLHLKADIYRQLGWMYHNVEAFGS 134
F LE+ ++ H Y + +K A EL + L E+ L + LG + +N
Sbjct: 423 FEDLELWDNLIHCYSLLEKKATAVELIRKRLSERPNDPRL----WCSLGDITNNDA---- 578
Query: 135 KTERMTLAIRCLEKSLEADRN-SGQTLYLLGRCYASIGKADHAFDAYRNVVEKTTPTADV 193
C EK+LE N S + L R + G+ + + + + + + D
Sbjct: 579 ----------CYEKALEVSNNRSARAKRSLARSAYNRGEYETSKVLWESAMSMNSMFPDG 728
Query: 194 WCSIGVLYQQQKQYVDALQAYVCAVQLDKCHSASWINLGILYESCSQLKDALACYIHSVR 253
W + G + + AL A+ AVQLD + +W N+ L+ + K+A + +++
Sbjct: 729 WFAFGAAALKARDVEKALDAFTRAVQLDPDNGEAWNNIACLHLIKKKSKEAFIAFKEALK 908
Query: 254 ASKD 257
++
Sbjct: 909 FKRN 920
>TC80284 similar to PIR|T04740|T04740 hypothetical protein F6G17.110 -
Arabidopsis thaliana, partial (31%)
Length = 1645
Score = 43.1 bits (100), Expect = 7e-04
Identities = 40/196 (20%), Positives = 88/196 (44%)
Frame = +2
Query: 61 KHLKLSYVDASPSTFCKLEIQFHIAHLYEVQKKHKLAKELYEQLLKEKDLPLHLKADIYR 120
K ++ V + S + IA + E + H ++ +++Q+LKE + +A I R
Sbjct: 809 KKFSVARVSKTKSISVDFRLSRGIAEVNEGKYAHAIS--IFDQILKEDSA--YPEALIGR 976
Query: 121 QLGWMYHNVEAFGSKTERMTLAIRCLEKSLEADRNSGQTLYLLGRCYASIGKADHAFDAY 180
+ + + AI K+++ + +G+ G+ A++G+ A +
Sbjct: 977 GTAYAFKR---------ELHSAIADFTKAIQYNPAAGEAWKRRGQARAALGEFVEAIEDL 1129
Query: 181 RNVVEKTTPTADVWCSIGVLYQQQKQYVDALQAYVCAVQLDKCHSASWINLGILYESCSQ 240
+E TAD+ G++ + K++ A++ VQLD+ + +++ LG+ S +
Sbjct: 1130TKALEFEPNTADILHERGIVNFKFKEFNTAVEDLSACVQLDRDNKSAYTYLGLALSSIGE 1309
Query: 241 LKDALACYIHSVRASK 256
K A ++ S++ K
Sbjct: 1310YKKAEEAHLKSLQLDK 1357
>TC79752 similar to GP|11994670|dbj|BAB02898. gene_id:K7P8.17~unknown
protein {Arabidopsis thaliana}, partial (2%)
Length = 2137
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/130 (29%), Positives = 48/130 (36%), Gaps = 12/130 (9%)
Frame = +1
Query: 395 GMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYR 454
G+ +GM A Q P Y ++ QQ L H++ N QQ +
Sbjct: 574 GIPAFSGMSSAFNSQTTPPSVQQYPVHAQQQSHLSNPHPHLQGPNHPNNQQQAYIRLAKE 753
Query: 455 LMQQHQQQLRMQQQQ------------QQQLHAGVSPVQQPGQVARPPQQSLQQPSVKSC 502
Q QQQ R QQQ Q Q +S QQ A+ PQ S QQ SV
Sbjct: 754 RQLQQQQQQRYLQQQQLSATNALIPHVQAQAQPPISSPQQNSSQAQ-PQNSSQQVSVSPA 930
Query: 503 PPQAVHIPFS 512
P + P S
Sbjct: 931 TPSSPLTPMS 960
Score = 29.6 bits (65), Expect = 8.4
Identities = 34/134 (25%), Positives = 51/134 (37%)
Frame = +1
Query: 338 QPQQKRHPGMAQQGGPKPNHYVNGVNGGAVPPPPYPGAVPGAGPNAKRFKPNGEVDNGMV 397
Q QQ+R+ + QQ N + V A PP P N+ + +P V
Sbjct: 766 QQQQQRY--LQQQQLSATNALIPHVQAQAQPPISSPQQ------NSSQAQPQNSSQQVSV 921
Query: 398 GAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQ 457
A P + Q + L Q + S V S +QRQ+ Q + + + +
Sbjct: 922 SPATPSSPLTPMSSQHQQQKHDLPQPGFS--RNPGSSVTSQAVKQRQRQAQQRQYQQSAR 1095
Query: 458 QHQQQLRMQQQQQQ 471
QH Q + Q QQQ
Sbjct: 1096QHPNQPQHAQAQQQ 1137
>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
granulovirus}, partial (42%)
Length = 909
Score = 41.2 bits (95), Expect = 0.003
Identities = 42/152 (27%), Positives = 51/152 (32%), Gaps = 36/152 (23%)
Frame = +2
Query: 306 KTPMPSITSKAELPTIEEAWNTPVVSDWNSKHQPQQKR-----------HPGMAQQGGPK 354
+TP P SK E N + + H P +K+ H A GGP
Sbjct: 449 RTPKPDPGSK-------ENHNRTPGKEGPATHGPPEKKTPPPTPKRRGKHTKRAPGGGPP 607
Query: 355 PNHYVNGVNGGAVPPPPYP--------GAVPGAGPNAKRFKPNGEVDNGMVGAAGMGHAR 406
P H G G PPPP P A P P KR P +G GA R
Sbjct: 608 PPHPGRGGGGPGGPPPPPPKKNSERGGRAAPRGRPGTKRKNPRRPAGSGPRGAPAKKTPR 787
Query: 407 ----------PPQ-------AQPQQPPPYYLN 421
PP+ PQ+PPP+ N
Sbjct: 788 RTRERGKKKKPPKKTPKTTTTTPQKPPPHKKN 883
Score = 32.7 bits (73), Expect = 0.99
Identities = 29/99 (29%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Frame = +2
Query: 326 NTPVVSDWNSKHQPQQKRHPGMA-------QQGGPKPNHYVNGVNGGAVPPPPYPGAVPG 378
N P S H P + HPG A + GP P G GG P PP P
Sbjct: 275 NHPNHPTTRSAHGP--RNHPGDAPHRRRRPNKPGPPPRR--GGGQGGRAPAPPPPPPKAR 442
Query: 379 AGPNAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPP 417
G K + E N G G PP+ + P P
Sbjct: 443 EGRTPKPDPGSKENHNRTPGKEGPATHGPPEKKTPPPTP 559
Score = 32.0 bits (71), Expect = 1.7
Identities = 32/117 (27%), Positives = 40/117 (33%)
Frame = +1
Query: 301 QTQLAKTPMPSITSKAELPTIEEAWNTPVVSDWNSKHQPQQKRHPGMAQQGGPKPNHYVN 360
Q K P ++A P EEA K P++K++P +G P P
Sbjct: 16 QPPAPKRPPKEKDTQARNPQPEEATK-------KQKRAPEKKKNP---PRGQPPP----- 150
Query: 361 GVNGGAVPPPPYPGAVPGAGPNAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPP 417
PPPP P A P P + K N PP P QPPP
Sbjct: 151 -------PPPPPPQAPPTKPPTRQTPKNNTPPPPPHT---------PPDPTPPQPPP 273
Score = 30.8 bits (68), Expect = 3.7
Identities = 24/95 (25%), Positives = 32/95 (33%)
Frame = +2
Query: 327 TPVVSDWNSKHQPQQKRHPGMAQQGGPKPNHYVNGVNGGAVPPPPYPGAVPGAGPNAKRF 386
TP N K + K+ P ++ P+ +H PPP P PN +
Sbjct: 53 TPKPETPNRKKPQKNKKEPPKKRKTPPEASH-----------PPPRPRPPRPPQPNHQHD 199
Query: 387 KPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYYLN 421
KP H PP P PPP + N
Sbjct: 200 KPQKTTH------PHHPHTPPPTPHPPNPPPNHPN 286
Score = 30.4 bits (67), Expect = 4.9
Identities = 34/130 (26%), Positives = 47/130 (36%), Gaps = 17/130 (13%)
Frame = +3
Query: 306 KTPMPSITSKAELPTIEEAWNTPVVSDWNSKHQPQQKRHPGMAQQGGPKPNHYVNGVNGG 365
+ P T++ PT ++A +P HPG +GG K GG
Sbjct: 300 EAPTDPGTTRGTPPTADDAQTSPA-------------HHPG---EGGGK---------GG 404
Query: 366 AVPPPPYPGAVPGAGPN------AKR--FKPNGEVDNGMVGAAGMGHARPPQAQ------ 411
A PPPP P G G + AKR +P G+ D H P Q +
Sbjct: 405 APPPPPRPPPRHGRGGHQNQTREAKRTTTEPQGKRDRPRTDPRKKKHPPPHQKEGGNTQK 584
Query: 412 ---PQQPPPY 418
+ PPP+
Sbjct: 585 EPRGEDPPPH 614
>TC80581 similar to GP|19683021|gb|AAL92644.1 hypothetical protein
{Dictyostelium discoideum}, partial (5%)
Length = 850
Score = 40.8 bits (94), Expect = 0.004
Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = +1
Query: 398 GAAGMGHARPPQAQPQ-------QPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQ 450
G+A + + PQ+Q Q Q LNQQQL L ++ P + Q+QQ
Sbjct: 160 GSASLLPLQQPQSQQQLASSAQLQQSSLTLNQQQLPQL------MQQPKPMGQPQLQQQL 321
Query: 451 HHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSL--QQPSVKSCP 503
H +L+QQ Q QL+ Q Q+ QQ A + +QQ Q L QQP P
Sbjct: 322 QHQQLLQQ-QLQLQQQYQRLQQQLASSAQLQQNSLTLNQQQLPLLMQQPKSMGQP 483
Score = 40.0 bits (92), Expect = 0.006
Identities = 41/106 (38%), Positives = 46/106 (42%), Gaps = 24/106 (22%)
Frame = +1
Query: 409 QAQPQQPPPYYLNQQQLQLLQYY-------------QSHVESLN--PQQRQQ-------- 445
Q Q QQ L QQQLQL Q Y Q + +LN PQ QQ
Sbjct: 490 QQQQQQ-----LLQQQLQLQQQYQRLQQQLASSAQLQQNSSTLNQLPQLMQQQKSMGQPL 654
Query: 446 -MQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPP 490
QQ Q L+Q QQQL +QQQQQQQ +QQ Q R P
Sbjct: 655 LQQQLQQQQLLLQ--QQQLVLQQQQQQQQQQRTQLLQQQMQALRIP 786
Score = 37.4 bits (85), Expect = 0.040
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 420 LNQQQLQLL-QYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVS 478
LNQQQL LL Q +S + L QQ+QQ+ Q Q +QQ Q+L+ Q QL S
Sbjct: 427 LNQQQLPLLMQQPKSMGQPLLQQQQQQLLQQQLQ---LQQQYQRLQQQLASSAQLQQNSS 597
Query: 479 PVQQPGQVARPPQQSLQQP 497
+ Q Q+ + Q+S+ QP
Sbjct: 598 TLNQLPQLMQ-QQKSMGQP 651
Score = 37.0 bits (84), Expect = 0.052
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Frame = +1
Query: 409 QAQPQQPPPYYLNQQQLQLLQYYQSHVESLN--PQQRQQ--------MQQFQHHYRLMQQ 458
Q Q Q Y QQQL Q + +LN PQ QQ +QQ +L+ Q
Sbjct: 514 QQQLQLQQQYQRLQQQLASSAQLQQNSSTLNQLPQLMQQQKSMGQPLLQQQLQQQQLLLQ 693
Query: 459 HQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQP 497
QQ + QQQQQQQ QQ Q+ + Q+L+ P
Sbjct: 694 QQQLVLQQQQQQQQ--------QQRTQLLQQQMQALRIP 786
Score = 34.3 bits (77), Expect = 0.34
Identities = 22/59 (37%), Positives = 32/59 (53%)
Frame = +1
Query: 426 QLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPG 484
QL+Q +S + L QQ QQ Q +L+ Q QQQ + QQQ+ Q L + ++ PG
Sbjct: 616 QLMQQQKSMGQPLLQQQLQQQQLLLQQQQLVLQQQQQ-QQQQQRTQLLQQQMQALRIPG 789
Score = 32.7 bits (73), Expect = 0.99
Identities = 32/92 (34%), Positives = 39/92 (41%), Gaps = 3/92 (3%)
Frame = +1
Query: 408 PQAQPQ---QPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLR 464
P QPQ Q L QQQLQL Q YQ Q+Q Q + +QQQL
Sbjct: 289 PMGQPQLQQQLQHQQLLQQQLQLQQQYQR-------LQQQLASSAQLQQNSLTLNQQQLP 447
Query: 465 MQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQ 496
+ QQ + + G +QQ Q Q LQQ
Sbjct: 448 LLMQQPKSM--GQPLLQQQQQQLLQQQLQLQQ 537
>TC92109 similar to GP|19683031|gb|AAL92653.1 HYPOTHETICAL 31.4 KDA PROTEIN
{Dictyostelium discoideum}, partial (2%)
Length = 653
Score = 40.4 bits (93), Expect = 0.005
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 406 RPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRM 465
+PP P PPP + +Q +E ++ Q+ + + Y+L QQ QQ +
Sbjct: 227 KPPSPSPPTPPPPTSISDHARTAAIHQHRIEEAYHAKQLQIMEAKRQYQLQQQQLQQQQQ 406
Query: 466 QQQQQ 470
+QQQQ
Sbjct: 407 EQQQQ 421
>TC80931 similar to GP|14190783|gb|AAF65166.2 putative phloem transcription
factor M1 {Apium graveolens}, partial (67%)
Length = 1193
Score = 40.0 bits (92), Expect = 0.006
Identities = 30/77 (38%), Positives = 39/77 (49%), Gaps = 8/77 (10%)
Frame = +2
Query: 437 SLNPQQRQQMQQFQHHYRLMQ--------QHQQQLRMQQQQQQQLHAGVSPVQQPGQVAR 488
S+ PQ +QQMQQ Q +L Q Q QQQ+ QQQQQQL P Q Q+++
Sbjct: 551 SIFPQLQQQMQQQQQQQQLPQLQQNQQLSQIQQQIPQLQQQQQQL-----PQLQQQQLSQ 715
Query: 489 PPQQSLQQPSVKSCPPQ 505
QQ Q P ++ Q
Sbjct: 716 LQQQQQQLPQLQQLQHQ 766
Score = 39.7 bits (91), Expect = 0.008
Identities = 33/83 (39%), Positives = 42/83 (49%), Gaps = 7/83 (8%)
Frame = +2
Query: 409 QAQPQQPPPYYLNQQQLQLLQYY---QSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRM 465
Q Q QQ P NQQ Q+ Q Q + L Q+QQ+ Q Q + + Q QQL+
Sbjct: 587 QQQQQQLPQLQQNQQLSQIQQQIPQLQQQQQQLPQLQQQQLSQLQQQQQQLPQ-LQQLQH 763
Query: 466 QQ--QQQQQLHAGVSP--VQQPG 484
QQ QQQQ + AG+ VQ PG
Sbjct: 764 QQLPQQQQMVGAGMGQTYVQGPG 832
Score = 38.9 bits (89), Expect = 0.014
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 422 QQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQ----QQLHAGV 477
QQQ+Q Q Q + QQ QQ+ Q Q +QQ QQQL QQQQ QQ +
Sbjct: 569 QQQMQQQQQQQQLPQL---QQNQQLSQIQQQIPQLQQQQQQLPQLQQQQLSQLQQQQQQL 739
Query: 478 SPVQQPGQVARPPQQSL 494
+QQ P QQ +
Sbjct: 740 PQLQQLQHQQLPQQQQM 790
Score = 35.0 bits (79), Expect = 0.20
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 411 QPQQPPPYYLNQQQLQLLQYYQ--SHVESLNPQQRQQMQQF-QHHYRLMQQHQQQLRMQQ 467
Q QQ QQQL LQ Q S ++ PQ +QQ QQ Q + + Q QQQ +
Sbjct: 563 QLQQQMQQQQQQQQLPQLQQNQQLSQIQQQIPQLQQQQQQLPQLQQQQLSQLQQQQQQLP 742
Query: 468 QQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVKS 501
Q QQ H + P QQ A Q +Q P +S
Sbjct: 743 QLQQLQHQQL-PQQQQMVGAGMGQTYVQGPGGRS 841
Score = 30.0 bits (66), Expect = 6.4
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = +1
Query: 441 QQRQQMQQFQHHYRLMQQHQQQLRMQQQQQ 470
QQ+QQMQQ Q MQQHQQ MQ QQQ
Sbjct: 487 QQQQQMQQQQ-----MQQHQQ---MQSQQQ 552
>TC85969 similar to GP|21553908|gb|AAM62991.1 unknown {Arabidopsis thaliana},
partial (31%)
Length = 2756
Score = 39.3 bits (90), Expect = 0.011
Identities = 34/90 (37%), Positives = 39/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 409 QAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQ 468
Q Q P YL QQQ +L Q Q E QQ+ Q Q Q + Q QQQL+ Q
Sbjct: 1583 QVQQHVQDPGYLLQQQFEL-QQQQQQFELQQQQQQPQHQPQQSQPQHQPQQQQQLQH-HQ 1756
Query: 469 QQQQLHAGVSPVQQPG-QVARPPQQSLQQP 497
QQQ +H G P P S QQP
Sbjct: 1757 QQQFIHGGHYIHHNPAIPTYYPVYPSQQQP 1846
Score = 32.7 bits (73), Expect = 0.99
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = +2
Query: 408 PQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQ 467
PQ QPQQ P + QQQ QL + Q QQ + HH + + QQ
Sbjct: 1685 PQHQPQQSQPQHQPQQQQQLQHHQQ--------QQFIHGGHYIHHNPAIPTYYPVYPSQQ 1840
Query: 468 QQQQQLHAGVSPVQQPGQ 485
Q Q++ P +QP Q
Sbjct: 1841 QPHHQVY--YVPARQPQQ 1888
>BG647317 similar to GP|18033922|gb| SEUSS transcriptional co-regulator
{Arabidopsis thaliana}, partial (7%)
Length = 514
Score = 38.9 bits (89), Expect = 0.014
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Frame = +2
Query: 411 QPQQPPPYYLNQQQLQLLQYYQSHVE---------SLNPQQRQQMQQFQHHYRLMQQHQQ 461
+PQ +L+QQQ Q Q H+ +N Q+Q++ QFQ +L++
Sbjct: 89 EPQHNDQPFLHQQQQQQQQQQLLHMSRQTSQATAAQMNLLQQQRILQFQQQQQLLKSMPP 268
Query: 462 QLRMQ-----QQQQQQLHAGVSPVQQPGQVAR 488
Q R Q QQQ + + P +PG AR
Sbjct: 269 QQRSQLPQQFQQQNMPVRSPAKPAYEPGMCAR 364
Score = 35.0 bits (79), Expect = 0.20
Identities = 28/78 (35%), Positives = 36/78 (45%), Gaps = 8/78 (10%)
Frame = +2
Query: 441 QQRQQMQQFQHHYRLMQQH--------QQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQ 492
QQ+QQ QQ H R Q QQQ +Q QQQQQL + P Q+ ++ PQQ
Sbjct: 128 QQQQQQQQLLHMSRQTSQATAAQMNLLQQQRILQFQQQQQLLKSMPPQQR----SQLPQQ 295
Query: 493 SLQQPSVKSCPPQAVHIP 510
QQ P + + P
Sbjct: 296 FQQQNMPVRSPAKPAYEP 349
Score = 31.2 bits (69), Expect = 2.9
Identities = 24/79 (30%), Positives = 34/79 (42%), Gaps = 11/79 (13%)
Frame = +2
Query: 438 LNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSL--- 494
+ PQQ Q M+ ++ QH Q + QQQQQQ + + + A Q +L
Sbjct: 38 MEPQQLQSMRGMSA-VKMEPQHNDQPFLHQQQQQQQQQQLLHMSRQTSQATAAQMNLLQQ 214
Query: 495 --------QQPSVKSCPPQ 505
QQ +KS PPQ
Sbjct: 215 QRILQFQQQQQLLKSMPPQ 271
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.324 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,782,256
Number of Sequences: 36976
Number of extensions: 837947
Number of successful extensions: 13054
Number of sequences better than 10.0: 165
Number of HSP's better than 10.0 without gapping: 6294
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 1528
Number of HSP's gapped (non-prelim): 9744
length of query: 1366
length of database: 9,014,727
effective HSP length: 108
effective length of query: 1258
effective length of database: 5,021,319
effective search space: 6316819302
effective search space used: 6316819302
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Medicago: description of AC139744.2