BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139600.8 + phase: 0
(318 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF647428 homologue to PIR|T51621|T51 myb-like protein [imported]... 368 e-102
TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcript... 300 5e-94
BG644406 homologue to PIR|T07398|T07 myb-related transcription f... 270 7e-73
TC84620 similar to PIR|JQ0956|JQ0956 myb-related protein 306 - g... 193 2e-69
TC90494 similar to PIR|T51621|T51621 myb-like protein [imported]... 249 1e-66
AW776119 similar to PIR|JQ0956|JQ09 myb-related protein 306 - ga... 227 4e-60
TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine ... 183 9e-47
TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD460... 182 2e-46
BI266228 homologue to GP|10178078|dbj MYB96 transcription factor... 179 1e-45
TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine ... 179 2e-45
BG448527 similar to PIR|T51509|T51 probable transcription factor... 177 5e-45
TC81805 similar to GP|9758323|dbj|BAB08797.1 Myb-related transcr... 175 2e-44
TC88428 homologue to PIR|T07393|T07393 myb-related transcription... 171 3e-43
BE124666 similar to PIR|JQ0957|JQ0 myb-related protein 330 - gar... 170 8e-43
TC88523 similar to PIR|T05690|T05690 myb-related transcription f... 169 1e-42
TC82254 similar to GP|22266673|dbj|BAC07543. myb-related transcr... 165 2e-41
BF634640 homologue to GP|2832408|emb R2R3-MYB transcription fact... 164 4e-41
TC89397 homologue to GP|2832408|emb|CAA74605.1 R2R3-MYB transcri... 162 1e-40
TC81202 homologue to GP|17380966|gb|AAL36295.1 putative transcri... 162 2e-40
TC89556 similar to GP|18419456|gb|AAL69334.1 blind {Lycopersicon... 161 3e-40
>BF647428 homologue to PIR|T51621|T51 myb-like protein [imported] -
Arabidopsis thaliana, partial (44%)
Length = 689
Score = 368 bits (945), Expect = e-102
Identities = 175/175 (100%), Positives = 175/175 (100%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY
Sbjct: 92 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 271
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE
Sbjct: 272 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 451
Query: 121 TSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNL 175
TSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNL
Sbjct: 452 TSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNL 616
Score = 57.4 bits (137), Expect = 7e-09
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3
Query: 157 KKALSEALQPEKSTSSSNLMLPLESNFSSESSFCSTKPTTQSL 199
KK L + +K+ + LMLPLESNFSSESSFCSTKPTTQSL
Sbjct: 561 KKHLVKLFNQKKALLVATLMLPLESNFSSESSFCSTKPTTQSL 689
>TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcription factor
{Arabidopsis thaliana}, partial (49%)
Length = 984
Score = 300 bits (769), Expect(3) = 5e-94
Identities = 144/184 (78%), Positives = 159/184 (86%), Gaps = 2/184 (1%)
Frame = +1
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M RPPCCDKEGVKKGPWTPEEDIILV+YIQEHGPGNW+AVPT TGL RCSKSCRLRWTNY
Sbjct: 157 MGRPPCCDKEGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNY 336
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRPGIKRGNFT+QEEKMIIHLQ LLGNRWAAIA+YLPQRTDNDIKNYWNT+LKKKLKK +
Sbjct: 337 LRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKSQ 516
Query: 121 TSTSSESCLGHDE--FSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNLMLP 178
T ++E C+ +E FS SQ I RGQWERRLQTDI MAKKAL+EAL P+K + + + P
Sbjct: 517 TGNNAE-CINFEEEKFSASQRIPRGQWERRLQTDIQMAKKALNEALSPQKLSPNFSTSNP 693
Query: 179 LESN 182
SN
Sbjct: 694 TNSN 705
Score = 58.2 bits (139), Expect(3) = 5e-94
Identities = 34/60 (56%), Positives = 38/60 (62%), Gaps = 3/60 (5%)
Frame = +2
Query: 187 SSFCSTKPTTQSLSYASSADNIARLLKGWMKNKPKEGSNGNNTNVTQNYET---SASSEG 243
+SF STK QS YASSADNIARLLKGWMKN K + N+ T+ T SASS G
Sbjct: 704 TSFSSTKEPGQSFCYASSADNIARLLKGWMKNPIKSSVSTNSVGDTKXPSTNFDSASSSG 883
Score = 25.4 bits (54), Expect(3) = 5e-94
Identities = 12/22 (54%), Positives = 17/22 (76%), Gaps = 3/22 (13%)
Frame = +3
Query: 256 TFESLFGYE---SFDSSNSDST 274
TFESLFG++ S +SSNS+ +
Sbjct: 909 TFESLFGFDPLKSLESSNSEXS 974
>BG644406 homologue to PIR|T07398|T07 myb-related transcription factor THM6 -
tomato, partial (42%)
Length = 762
Score = 270 bits (689), Expect = 7e-73
Identities = 139/219 (63%), Positives = 163/219 (73%), Gaps = 9/219 (4%)
Frame = +1
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M RPPCCDK GVKKGPWTPEEDI+LVS++QEHGPGNW+ VPT+TGL RCSKSCRLRWTNY
Sbjct: 145 MGRPPCCDKTGVKKGPWTPEEDIMLVSFVQEHGPGNWRTVPTHTGLRRCSKSCRLRWTNY 324
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRPGIKRG+FTDQEEKMII LQALLGN+WAAIA+YLP+RTDNDIKNYWNT+LKKKLKKLE
Sbjct: 325 LRPGIKRGSFTDQEEKMIIQLQALLGNKWAAIASYLPERTDNDIKNYWNTHLKKKLKKLE 504
Query: 121 TS---TSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKS------TS 171
TS ++ CL S +RGQWER LQ DI+ AK+A + AL +KS T
Sbjct: 505 TSGLYSNDGHCL-----STYNSTSRGQWERTLQADINTAKQAFTNALSLDKSSPIPDYTI 669
Query: 172 SSNLMLPLESNFSSESSFCSTKPTTQSLSYASSADNIAR 210
+ MLP+ T+ + +YAS+A NIA+
Sbjct: 670 TDIGMLPIH----------*TRAKMSTTTYASNA*NIAK 756
>TC84620 similar to PIR|JQ0956|JQ0956 myb-related protein 306 - garden
snapdragon, partial (44%)
Length = 593
Score = 193 bits (490), Expect(2) = 2e-69
Identities = 84/95 (88%), Positives = 92/95 (96%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M RPPCC+K G+KKGPWTPEEDIILVSYIQ+HGPGNW++VPTNTGL+RCSKSCRLRWTNY
Sbjct: 119 MGRPPCCEKLGIKKGPWTPEEDIILVSYIQQHGPGNWRSVPTNTGLMRCSKSCRLRWTNY 298
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAY 95
LRPGIKRGNFTD EEKMI+HLQALLGNRWAAIA+Y
Sbjct: 299 LRPGIKRGNFTDHEEKMIVHLQALLGNRWAAIASY 403
Score = 87.4 bits (215), Expect(2) = 2e-69
Identities = 44/67 (65%), Positives = 52/67 (76%)
Frame = +3
Query: 96 LPQRTDNDIKNYWNTYLKKKLKKLETSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHM 155
LPQRTDNDIKNYWNT+LK+K+ K ++ST G D+ S SQ +GQWER LQTDIHM
Sbjct: 405 LPQRTDNDIKNYWNTHLKRKMNKDQSSTDE----GVDQXSRSQLPNKGQWERXLQTDIHM 572
Query: 156 AKKALSE 162
AK+ALSE
Sbjct: 573 AKQALSE 593
>TC90494 similar to PIR|T51621|T51621 myb-like protein [imported] -
Arabidopsis thaliana, partial (41%)
Length = 824
Score = 249 bits (636), Expect = 1e-66
Identities = 138/267 (51%), Positives = 168/267 (62%), Gaps = 12/267 (4%)
Frame = +3
Query: 29 IQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNR 88
IQEHGPGNW++VPT TGL+RCSKSCRLRWTNYLRPGIKRGNF D EEKMIIHLQALLGNR
Sbjct: 15 IQEHGPGNWRSVPTTTGLMRCSKSCRLRWTNYLRPGIKRGNFNDHEEKMIIHLQALLGNR 194
Query: 89 WAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLETSTSSESCLGHDEFSVSQPIARGQWERR 148
WAAIA+YLP+RTDNDIKNYWNT+L+KKLKK+ T E+ + + S P +GQWERR
Sbjct: 195 WAAIASYLPERTDNDIKNYWNTHLRKKLKKI-NQTGDENEVEEN----SIPQVKGQWERR 359
Query: 149 LQTDIHMAKKALSEALQPEKSTSSSNLMLPLESNFSSESSFCSTKPTTQSLSYASSADNI 208
LQTDIHMAK+AL EAL +K T P+ + Q+ YAS+ +NI
Sbjct: 360 LQTDIHMAKQALCEALSLDKPT-------PILAE-------------NQTSPYASNTENI 479
Query: 209 ARLLKGWMKNKPKEGSNGNNTNVTQNYETSASSEGMEKGSTSVELSETFESLFGYESFDS 268
ARLL+ WMK N+ N S S EG + + + F+SL + S +S
Sbjct: 480 ARLLEKWMKKPENSVETTNSGNSIMVVTGSGSREGGQNTIACKQKDQAFDSLVSFNSLNS 659
Query: 269 SNSDSTTL------------FQDESKP 283
S S ++ FQ +SKP
Sbjct: 660 DCSQSVSVEEKNFLAMDSCFFQYQSKP 740
>AW776119 similar to PIR|JQ0956|JQ09 myb-related protein 306 - garden
snapdragon, partial (4%)
Length = 535
Score = 227 bits (579), Expect = 4e-60
Identities = 113/117 (96%), Positives = 114/117 (96%)
Frame = -2
Query: 202 ASSADNIARLLKGWMKNKPKEGSNGNNTNVTQNYETSASSEGMEKGSTSVELSETFESLF 261
ASSADNIARLLKGWMKN KEGSNGNNTNVTQNYETSASSEGMEKGSTSVELSETFESLF
Sbjct: 528 ASSADNIARLLKGWMKNNLKEGSNGNNTNVTQNYETSASSEGMEKGSTSVELSETFESLF 349
Query: 262 GYESFDSSNSDSTTLFQDESKPENIGEIMPFSMLEKWLLDDGACQEKVGLSEINYIF 318
GYESFDSSNSDSTTLFQDESKPENIGEIMPFS LEKWLLDDGACQ+KVGLSEINYIF
Sbjct: 348 GYESFDSSNSDSTTLFQDESKPENIGEIMPFSRLEKWLLDDGACQKKVGLSEINYIF 178
>TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine max},
partial (85%)
Length = 1389
Score = 183 bits (464), Expect = 9e-47
Identities = 82/127 (64%), Positives = 101/127 (78%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
MVR PCC+K G+K+GPW+ EED IL SYIQ+HG GNW+A+P GLLRC KSCRLRW NY
Sbjct: 107 MVRAPCCEKMGLKRGPWSLEEDEILTSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY 286
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRP IKRGNFT++EE+ II L +LGNRW+AIAA LP RTDN+IKN W+T+LKKKL +
Sbjct: 287 LRPDIKRGNFTNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLNQTN 466
Query: 121 TSTSSES 127
+ ++
Sbjct: 467 SEAKKKA 487
>TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD46010.1
[imported] - Arabidopsis thaliana, partial (39%)
Length = 1259
Score = 182 bits (461), Expect = 2e-46
Identities = 78/116 (67%), Positives = 97/116 (83%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCCD+ G+KKGPWTPEED LV +IQ+HG G+W+A+P GL RC KSCRLRWTNY
Sbjct: 56 MGRSPCCDESGLKKGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNY 235
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
LRP IKRG F+ +EE+ I+HL ++LGN+W+AIA +LP RTDN+IKN+WNT+LKKKL
Sbjct: 236 LRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKL 403
>BI266228 homologue to GP|10178078|dbj MYB96 transcription factor-like
protein {Arabidopsis thaliana}, partial (24%)
Length = 384
Score = 179 bits (455), Expect = 1e-45
Identities = 78/88 (88%), Positives = 85/88 (95%)
Frame = +1
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M RPPCC+K G+KKGPWTPEEDIILVSYIQ+HGPGNW++VPTNTGL+RCSKSCRLRWTNY
Sbjct: 55 MGRPPCCEKLGIKKGPWTPEEDIILVSYIQQHGPGNWRSVPTNTGLMRCSKSCRLRWTNY 234
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNR 88
LRPGIKRGNFTD EEKMI+HLQALLGNR
Sbjct: 235 LRPGIKRGNFTDHEEKMIVHLQALLGNR 318
>TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine max},
partial (78%)
Length = 1156
Score = 179 bits (453), Expect = 2e-45
Identities = 79/116 (68%), Positives = 96/116 (82%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
MVR PCC+K+G+KKGPWT EED IL SYI +HG NW+A+P + GLLRC KSCRLRW NY
Sbjct: 66 MVRAPCCEKKGLKKGPWTLEEDEILTSYINKHGHSNWRALPKHAGLLRCGKSCRLRWINY 245
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
L+P IKRGNFT++EE+ II + LGNRW+AIAA LP RTDN+IKN W+T+LKK+L
Sbjct: 246 LKPDIKRGNFTNEEEETIIKMHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRL 413
>BG448527 similar to PIR|T51509|T51 probable transcription factor (MYB9) -
Arabidopsis thaliana, partial (40%)
Length = 633
Score = 177 bits (449), Expect = 5e-45
Identities = 78/119 (65%), Positives = 95/119 (79%)
Frame = +1
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCCD+ GVKKGPWT EED L+ YI +HG GNW + GL RC KSCRLRWTNY
Sbjct: 40 MGRSPCCDEIGVKKGPWTQEEDEKLIDYINKHGHGNWGTLSKRAGLNRCGKSCRLRWTNY 219
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
LRP IKRG FTD+EE++II+L ++LGN+W+ IAA+LP RTDN+IKNYWNT ++KKL K+
Sbjct: 220 LRPDIKRGKFTDEEERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKKLLKM 396
>TC81805 similar to GP|9758323|dbj|BAB08797.1 Myb-related transcription
factor-like protein {Arabidopsis thaliana}, partial
(46%)
Length = 1221
Score = 175 bits (443), Expect = 2e-44
Identities = 103/272 (37%), Positives = 140/272 (50%), Gaps = 17/272 (6%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPG-NWKAVPTNTGLLRCSKSCRLRWTN 59
M R PCCDK VKKGPW+PEED L SYI+ +G G NW A+P GL RC KSCRLRW N
Sbjct: 20 MGRAPCCDKANVKKGPWSPEEDATLKSYIETNGTGGNWIALPQKIGLKRCGKSCRLRWLN 199
Query: 60 YLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
YLRP IK G FT++E+ +I L +G+RW+ IAA LP RTDNDIKNYWNT LKKKL
Sbjct: 200 YLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK 379
Query: 120 ETSTSSESCL-------GHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSS 172
++ +CL G DE S S ++ ER +HM ++L L + +
Sbjct: 380 RKQSNINNCLMNQKDTNGIDENSYSNSLSSSALER---LQLHMQLQSLQNPLSFYNNNPA 550
Query: 173 SNLMLPL----ESNFSSESSFCSTKPTTQSLSYASSADNIARLLKGWMKNKPK-----EG 223
+ + L E + P Q+ + D + ++ N G
Sbjct: 551 ALVWPKLHPSQEKMIQISLQNSNNNPMMQNAFSSPQVDLLENIIPLENNNNNSVTFNASG 730
Query: 224 SNGNNTNVTQNYETSASSEGMEKGSTSVELSE 255
++ NN N + + E +EK + + + E
Sbjct: 731 NSSNNNNSIMHSSVAPRGEAVEKSTNNEGIQE 826
>TC88428 homologue to PIR|T07393|T07393 myb-related transcription factor -
tomato, partial (52%)
Length = 865
Score = 171 bits (434), Expect = 3e-43
Identities = 77/119 (64%), Positives = 95/119 (79%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCCDK G+KKGPWT EED L+++I +G W+AVP GLLRC KSCRLRWTNY
Sbjct: 141 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 320
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
LRP +KRG ++ EEKM+I L A LGNRW+ IA++LP RTDN+IKN+WNT++KKKLKK+
Sbjct: 321 LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKM 497
>BE124666 similar to PIR|JQ0957|JQ0 myb-related protein 330 - garden
snapdragon, partial (48%)
Length = 536
Score = 170 bits (430), Expect = 8e-43
Identities = 74/116 (63%), Positives = 93/116 (79%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCC+KE KG WT EED L++YI+ HG G W+++P GLLRC KSCRLRW NY
Sbjct: 27 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINY 206
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
LRP +KRGNFT+QE+ +II+L +LLGN+W+ IAA LP RTDN+IKNYWNT++K+KL
Sbjct: 207 LRPDLKRGNFTEQEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKL 374
>TC88523 similar to PIR|T05690|T05690 myb-related transcription factor MYB4
- Arabidopsis thaliana, partial (54%)
Length = 1292
Score = 169 bits (429), Expect = 1e-42
Identities = 85/185 (45%), Positives = 116/185 (61%)
Frame = +1
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCC+K KG WT EED L+SYI+ HG G W+++P GLLRC KSCRLRW NY
Sbjct: 271 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 450
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRP +KRGNFT++E+++II L +LLGN+W+ IA LP RTDN+IKNYWNT++++KL
Sbjct: 451 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG 630
Query: 121 TSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNLMLPLE 180
++ L S SQ QT ++A++ A+ ST ++ LP
Sbjct: 631 IDPATHRPLNEVSHSQSQS----------QTLHLQNQEAVTIAVAASTSTPTATKTLPTT 780
Query: 181 SNFSS 185
+F+S
Sbjct: 781 ISFAS 795
>TC82254 similar to GP|22266673|dbj|BAC07543. myb-related transcription
factor VlMYBB1-1 {Vitis labrusca x Vitis vinifera},
partial (46%)
Length = 754
Score = 165 bits (417), Expect = 2e-41
Identities = 90/208 (43%), Positives = 121/208 (57%), Gaps = 3/208 (1%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
MVR P CDK G++KG WTPEED L++Y+ +G NW+ +P GL RC KSCRLRW NY
Sbjct: 98 MVRTPYCDKNGLRKGTWTPEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWLNY 277
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRP IKRG+F+ +EE+ II L LGNRW I+A LP RTDN+IKNYW+T +KK L K +
Sbjct: 278 LRPDIKRGSFSHEEEETIIKLHEKLGNRWTMISANLPGRTDNEIKNYWHTTIKKTLVKNK 457
Query: 121 TSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNLMLPLE 180
++T + D S + P K L E L+ + S N+ P
Sbjct: 458 SNTKRGTKKAKDSNSKNHPTME-------------KPKKLGEMLE---NNSDFNITSPPS 589
Query: 181 SNFSSESSFCST---KPTTQSLSYASSA 205
S S+ +S C + T ++SY +S+
Sbjct: 590 SQPSTSASSCISLMDTAATTTISYENSS 673
>BF634640 homologue to GP|2832408|emb R2R3-MYB transcription factor
{Arabidopsis thaliana}, partial (39%)
Length = 657
Score = 164 bits (415), Expect = 4e-41
Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPG-NWKAVPTNTGLLRCSKSCRLRWTN 59
M R PCCDK VKKGPW+PEED L SYI++HG G NW A+P GL RC KSCRLRW N
Sbjct: 81 MGRAPCCDKANVKKGPWSPEEDSKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 260
Query: 60 YLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
YLRP +K G F+++E+ +I L +G+RW+ IAA LP RTDNDIKNYWNT LKKKL
Sbjct: 261 YLRPNLKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL 431
>TC89397 homologue to GP|2832408|emb|CAA74605.1 R2R3-MYB transcription
factor {Arabidopsis thaliana}, partial (40%)
Length = 1063
Score = 162 bits (411), Expect = 1e-40
Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPG-NWKAVPTNTGLLRCSKSCRLRWTN 59
M R PCCDK VKKGPW+PEED L SYI+++G G NW A+P GL RC KSCRLRW N
Sbjct: 39 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQNGTGGNWIALPQKIGLKRCGKSCRLRWLN 218
Query: 60 YLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
YLRP IK G F+++E+ +I L +G+RW+ IAA LP RTDNDIKNYWNT LKKKL
Sbjct: 219 YLRPNIKHGGFSEEEDDIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL 389
>TC81202 homologue to GP|17380966|gb|AAL36295.1 putative transcription
factor {Arabidopsis thaliana}, partial (40%)
Length = 1506
Score = 162 bits (410), Expect = 2e-40
Identities = 88/216 (40%), Positives = 125/216 (57%), Gaps = 14/216 (6%)
Frame = +2
Query: 3 RPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLR 62
R CC K+ ++KG W+PEED L++YI +HG G W +VP GL RC KSCRLRW NYLR
Sbjct: 65 RHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLR 244
Query: 63 PGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLETS 122
P +KRG F+ QEE +II L A+LGNRW+ IAA LP RTDN+IKN WN+ LKK+L++
Sbjct: 245 PDLKRGAFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQSGID 424
Query: 123 TSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPE--------------K 168
++ L E + + + ++ + + E +P
Sbjct: 425 PNTHKPLSEVENDNEKSLTSNKTNQKGSVSSNEVMSLMIEPTKPSIEGYPLEVSTTSKIN 604
Query: 169 STSSSNLMLPLESNFSSESSFCSTKPTTQSLSYASS 204
++SSS+ L L++ F S SS+ S Q+L+Y S+
Sbjct: 605 NSSSSSHELFLDTRFGSSSSYFS----FQNLNYGSN 700
>TC89556 similar to GP|18419456|gb|AAL69334.1 blind {Lycopersicon
esculentum}, partial (37%)
Length = 990
Score = 161 bits (408), Expect = 3e-40
Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPG-NWKAVPTNTGLLRCSKSCRLRWTN 59
M R PCCDK VKKGPW+PEED L YI++HG G NW +P GL RC KSCRLRW N
Sbjct: 18 MGRSPCCDKANVKKGPWSPEEDAKLKEYIEKHGTGGNWITLPKKVGLTRCGKSCRLRWLN 197
Query: 60 YLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
YLRP IK G F+D E+K+I L A +G+RW+ IA+ L RTDND+KNYWNT LKKK+ +
Sbjct: 198 YLRPNIKHGEFSDSEDKIICTLFASIGSRWSIIASKLEGRTDNDVKNYWNTKLKKKIMSM 377
Query: 120 ETS 122
S
Sbjct: 378 NHS 386
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.311 0.128 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,758,160
Number of Sequences: 36976
Number of extensions: 150001
Number of successful extensions: 911
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of query: 318
length of database: 9,014,727
effective HSP length: 96
effective length of query: 222
effective length of database: 5,465,031
effective search space: 1213236882
effective search space used: 1213236882
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC139600.8