TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139343.3 + phase: 0 /pseudo
         (216 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC79546 similar to PIR|T06369|T06369 probable 3 4-dihydroxy-2-bu...   315  6e-87
BI310836 homologue to PIR|T12621|T126 Dc3 promoter-binding facto...    34  0.037
CB065356 similar to GP|16421119|gb putative ABC superfamily tran...    28  3.5

>TC79546 similar to PIR|T06369|T06369 probable 3 4-dihydroxy-2-butanone
           kinase - tomato, partial (28%)
          Length = 615

 Score =  315 bits (808), Expect = 6e-87
 Identities = 156/158 (98%), Positives = 157/158 (98%)
 Frame = +3

Query: 1   METYPSLQYLDGYPNVKVVFRKDVYPGPPYDKVAIISGGGSGHEPAHAGFVGEGMLTAAI 60
           METYPSLQYLDGYPNVKVVFRKDVYPGPPYDKVAIISGGGSGHEPAHAGFVGEGMLTAAI
Sbjct: 141 METYPSLQYLDGYPNVKVVFRKDVYPGPPYDKVAIISGGGSGHEPAHAGFVGEGMLTAAI 320

Query: 61  CGDVFASPTVEAILAGIRAVTGPMGCLLIVKNYTGDRLNFGSAAEQAKSEGYKVESVIVA 120
           CGDVFASPTVEAILAGIRAVTGPMGCLLIVKNYTGDRLNFGSAAEQAKSEGYKV+SVIVA
Sbjct: 321 CGDVFASPTVEAILAGIRAVTGPMGCLLIVKNYTGDRLNFGSAAEQAKSEGYKVQSVIVA 500

Query: 121 DDCAIPPPLEMVGRRGLAGTILVHKVAGAAAAAGLSLA 158
           DDCAIPPPLEMVGRRGLAGTILVHKVAGAAA AGLSLA
Sbjct: 501 DDCAIPPPLEMVGRRGLAGTILVHKVAGAAAXAGLSLA 614


>BI310836 homologue to PIR|T12621|T126 Dc3 promoter-binding factor-1 - common
           sunflower, partial (6%)
          Length = 656

 Score = 34.3 bits (77), Expect = 0.037
 Identities = 24/58 (41%), Positives = 30/58 (51%)
 Frame = +2

Query: 28  PPYDKVAIISGGGSGHEPAHAGFVGEGMLTAAICGDVFASPTVEAILAGIRAVTGPMG 85
           PPY  VA   GGG+  EP+ +G+VG G    +I G  +  P   AI  G R V G  G
Sbjct: 335 PPYQTVA--QGGGAVGEPSSSGYVGNGKTRDSI-GTGYPPPP-PAICYGGRVVNGATG 496


>CB065356 similar to GP|16421119|gb putative ABC superfamily transport
           protein {Salmonella typhimurium LT2}, partial (74%)
          Length = 653

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 16/49 (32%), Positives = 28/49 (56%)
 Frame = -3

Query: 66  ASPTVEAILAGIRAVTGPMGCLLIVKNYTGDRLNFGSAAEQAKSEGYKV 114
           A   + A+LA ++A+    G +L+  +YTG+R     AA++A + G  V
Sbjct: 345 AEQDMHALLASVQAMAP--GDVLLAISYTGERREINLAAQEAAAIGADV 205


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.137    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,386,315
Number of Sequences: 36976
Number of extensions: 49164
Number of successful extensions: 203
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of query: 216
length of database: 9,014,727
effective HSP length: 92
effective length of query: 124
effective length of database: 5,612,935
effective search space: 696003940
effective search space used: 696003940
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)