TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC138451.9 - phase: 0 
         (68 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG449095 similar to PIR|T13432|T13 gamma-glutamyltransferase hom...    73  2e-14
BF643522 similar to PIR|T13432|T134 gamma-glutamyltransferase ho...    57  1e-09
TC86243 similar to GP|13877531|gb|AAK43843.1 Unknown protein {Ar...    25  4.4
TC86241 similar to GP|13877531|gb|AAK43843.1 Unknown protein {Ar...    25  4.4
TC80276 similar to GP|20197264|gb|AAC31223.2 FtsH protease  puta...    24  9.9

>BG449095 similar to PIR|T13432|T13 gamma-glutamyltransferase homolog
           T17A13.30 - Arabidopsis thaliana, partial (20%)
          Length = 516

 Score = 73.2 bits (178), Expect = 2e-14
 Identities = 38/56 (67%), Positives = 46/56 (81%), Gaps = 1/56 (1%)
 Frame = +2

Query: 7   GGHAVDAVVAAALCLGVVSSASSGIGGGAFMLLR-LANCVAKAFDMRETAPLLASK 61
           GGHAVDA VAAALC GV   ASSGIGGG+FM+++  ++  A+AFDMRETAPL AS+
Sbjct: 194 GGHAVDAAVAAALCAGVXFQASSGIGGGSFMVVKSSSSSKAQAFDMRETAPLAASQ 361


>BF643522 similar to PIR|T13432|T134 gamma-glutamyltransferase homolog
           T17A13.30 - Arabidopsis thaliana, partial (10%)
          Length = 523

 Score = 57.0 bits (136), Expect = 1e-09
 Identities = 30/52 (57%), Positives = 36/52 (68%)
 Frame = +3

Query: 7   GGHAVDAVVAAALCLGVVSSASSGIGGGAFMLLRLANCVAKAFDMRETAPLL 58
           GGHAVDA VAAALC GVV  ASSGIGGG+FM+++ ++         E  PLL
Sbjct: 285 GGHAVDAAVAAALCAGVVFQASSGIGGGSFMVVKSSSSSKAQAF*HERNPLL 440


>TC86243 similar to GP|13877531|gb|AAK43843.1 Unknown protein {Arabidopsis
           thaliana}, partial (41%)
          Length = 841

 Score = 25.4 bits (54), Expect = 4.4
 Identities = 18/41 (43%), Positives = 20/41 (47%)
 Frame = -1

Query: 17  AALCLGVVSSASSGIGGGAFMLLRLANCVAKAFDMRETAPL 57
           AAL LG  S  S G GGG  +   LA C +       TAPL
Sbjct: 403 AALRLG--SFFSFGGGGGGLLAAALALCSSLQLSPNTTAPL 287


>TC86241 similar to GP|13877531|gb|AAK43843.1 Unknown protein {Arabidopsis
           thaliana}, partial (41%)
          Length = 736

 Score = 25.4 bits (54), Expect = 4.4
 Identities = 18/41 (43%), Positives = 20/41 (47%)
 Frame = -2

Query: 17  AALCLGVVSSASSGIGGGAFMLLRLANCVAKAFDMRETAPL 57
           AAL LG  S  S G GGG  +   LA C +       TAPL
Sbjct: 441 AALRLG--SFFSFGGGGGGLLAAALALCSSLQLSPNTTAPL 325


>TC80276 similar to GP|20197264|gb|AAC31223.2 FtsH protease  putative
           {Arabidopsis thaliana}, partial (44%)
          Length = 1384

 Score = 24.3 bits (51), Expect = 9.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 1   MAAIHEGGHAVDAV 14
           M A HEGGHA+ A+
Sbjct: 449 MTAFHEGGHALVAI 490


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.323    0.134    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,834,559
Number of Sequences: 36976
Number of extensions: 17124
Number of successful extensions: 112
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of query: 68
length of database: 9,014,727
effective HSP length: 44
effective length of query: 24
effective length of database: 7,387,783
effective search space: 177306792
effective search space used: 177306792
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)