TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC138133.3 - phase: 0 /pseudo
         (430 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BF633515                                                              154  6e-38
TC83089                                                               137  8e-33
BE943429                                                              137  1e-32
BG453710 weakly similar to GP|21537057|gb| unknown {Arabidopsis ...    75  5e-21
BG646599                                                               75  3e-15
TC82474                                                                68  6e-12
BG454068 weakly similar to GP|22202804|dbj hypothetical protein~...    68  6e-12
TC83983 similar to GP|19386796|dbj|BAB86175. putative alpha-gluc...    30  2.3
BQ751278 similar to PIR|T37665|T37 probable t-complex protein 1 ...    30  2.3
TC84221 GP|1150487|emb|CAA91117.1 hypothetical protein {Lactobac...    28  5.2
BF646615 homologue to PIR|T48395|T483 GT2-like protein - Arabido...    28  5.2
TC80565 weakly similar to GP|14335072|gb|AAK59800.1 AT5g20050/F2...    28  8.9
TC93913 similar to GP|18087608|gb|AAL58934.1 AT3g51050/F24M12_90...    28  8.9

>BF633515 
          Length = 249

 Score =  154 bits (389), Expect = 6e-38
 Identities = 72/82 (87%), Positives = 77/82 (93%)
 Frame = +2

Query: 10 LDDVACLTHLPIEGRMLAHGKKMPRHEGAALLMTYLGVSQNEAEKICNQEYGGYISYPRL 69
          LDDVACLTHLPIEGRML+HGKKMP+HEGAALLM +LGVSQ EAEKIC QEYGGYISYPRL
Sbjct: 2  LDDVACLTHLPIEGRMLSHGKKMPKHEGAALLMRHLGVSQQEAEKICGQEYGGYISYPRL 181

Query: 70 RDFYTSYLGRANVLAGTEDPEE 91
          RDFYT+YLGRAN+LA TEDP E
Sbjct: 182RDFYTTYLGRANLLASTEDPVE 247


>TC83089 
          Length = 887

 Score =  137 bits (345), Expect = 8e-33
 Identities = 70/116 (60%), Positives = 86/116 (73%), Gaps = 1/116 (0%)
 Frame = +3

Query: 69  LRDFYTSYLGRANVLAGTEDPEELEELARVRTYCVRCYLLYLVGCLLFGDRSNKRIELIY 128
           LR++Y  YL  A  L+  ++  + +EL ++RT CV+ YLLYLVGCLLFGD+SNKRIEL+Y
Sbjct: 264 LREYYEGYLDSATRLSDPQNLGDPQELEKIRTTCVKWYLLYLVGCLLFGDKSNKRIELVY 443

Query: 129 LTTMADGYAGMRNYF*GAMTLAYLYGELADACRPGHRALGGSVTLLTA-WFLAHFP 183
           LTTM DGYAGMRN+  G MTLAYLY  L++   PG  AL  SVTL+TA WFL H P
Sbjct: 444 LTTMEDGYAGMRNHSWGGMTLAYLYHCLSEVSLPGGGALERSVTLVTAGWFLCHLP 611



 Score = 70.9 bits (172), Expect = 9e-13
 Identities = 39/98 (39%), Positives = 53/98 (53%), Gaps = 3/98 (3%)
 Frame = +3

Query: 249 SGWIMCGVRRVYRHLPERVLRQYGYVQTIPRHPTDVRDLPPPSIVQMFVDFGTHTLKADA 308
           +GW +C       HLPER LR YGYVQT+P  PT +  L P  +V  F++F  H      
Sbjct: 585 AGWFLC-------HLPERGLR*YGYVQTVPIPPTTIEPLEPAEVVTAFLEFALHVQSQQE 743

Query: 309 RGEQAGEDT-WRVADGYVLWYARVSHPQILPP--IPRD 343
           RGE   ED   + + GY+  + RVSH  ++ P  +P D
Sbjct: 744 RGESVPEDEGHKHSKGYMK*FYRVSHLLMIAPAAVPED 857


>BE943429 
          Length = 384

 Score =  137 bits (344), Expect = 1e-32
 Identities = 61/122 (50%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
 Frame = +2

Query: 221 DRIQLDDVCWRPYEKHREIQDFEEVFWYSGWIMCGVRRVYRHLPERVLRQYGYVQTIPRH 280
           D ++   V WRPYE  R++  F++V WYSGWIM G +++ RHLPERVLRQYGYVQT+PR 
Sbjct: 2   DSMEHCHVIWRPYEHRRDVTPFQDVCWYSGWIMAGKQKMVRHLPERVLRQYGYVQTVPRP 181

Query: 281 PTDVRDLPPPSIVQMFVDFGTHTLKADARGEQAGEDT-WRVADGYVLWYARVSHPQILPP 339
           PT +  L P  +   F +F  H L    RG+   ED  W+ +DGY+ W+ RVSHP I+ P
Sbjct: 182 PTTIVPLAPAEVATAFFEFVVHVLSQQDRGDPVPEDEWWKHSDGYIKWFYRVSHPLIVNP 361

Query: 340 IP 341
            P
Sbjct: 362 AP 367


>BG453710 weakly similar to GP|21537057|gb| unknown {Arabidopsis thaliana},
           partial (6%)
          Length = 651

 Score = 75.5 bits (184), Expect(2) = 5e-21
 Identities = 43/95 (45%), Positives = 55/95 (57%)
 Frame = -3

Query: 40  LLMTYLGVSQNEAEKICNQEYGGYISYPRLRDFYTSYLGRANVLAGTEDPEELEELARVR 99
           L+   LG+S   A      E  G+ISYP L+  Y  +L  A  L      EEL+E AR R
Sbjct: 298 LMTRLLGMSDANAMAEIRTESAGHISYPTLKRVYEDHLIEARRLEDPLTREELQERARRR 119

Query: 100 TYCVRCYLLYLVGCLLFGDRSNKRIELIYLTTMAD 134
            +CVR  LLYLV C+LF  ++N+ I+LIYL  MAD
Sbjct: 118 QWCVRSLLLYLVDCVLFTYKTNRHIDLIYLDCMAD 14



 Score = 43.5 bits (101), Expect(2) = 5e-21
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = -1

Query: 1   MPMGEMTVTLDDVACLTHLPIEGRMLAHGKK 31
           +PMGEMT+TLDDV  L H+PI G ML H ++
Sbjct: 414 LPMGEMTITLDDVYNLLHIPIHGCMLDHDEQ 322


>BG646599 
          Length = 711

 Score = 75.5 bits (184), Expect(2) = 3e-15
 Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
 Frame = +3

Query: 165 RALGGSVTLLTAWFLAHFPGFFSVDLNTDYLENYPV----AARWKHQKGHGEGITYRSLL 220
           + LGG  TLL  W   +FP   +   N    +   +    A RWK+ +G+ +    R ++
Sbjct: 33  KQLGGYATLLQCWIYEYFPTLGNRVENRVACDEPGMGVARAMRWKYPRGNLKVDQIRRMI 212

Query: 221 DRIQLDDVCWRPYEKHREIQDFEEVFWYSGWIMCGVRRVYRHLPERVLRQYGYVQTIPRH 280
           D +  +DV W P++ HR++  F+++   SG+I      V  +LPER LRQ+GY+Q IPR 
Sbjct: 213 DDLTPNDVIWCPFDSHRQVIPFDDICLSSGYIR-WCSNVVPYLPERCLRQFGYIQYIPR- 386

Query: 281 PTDVRDLPPPSIVQMFVD 298
                  PPP+     VD
Sbjct: 387 -------PPPNFNTFNVD 419



 Score = 23.9 bits (50), Expect(2) = 3e-15
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 327 WYARVSHPQILPP 339
           WY +VSHP ++ P
Sbjct: 517 WYYKVSHPHLIRP 555


>TC82474 
          Length = 992

 Score = 68.2 bits (165), Expect = 6e-12
 Identities = 31/88 (35%), Positives = 50/88 (56%)
 Frame = -2

Query: 194 YLENYPVAARWKHQKGHGEGITYRSLLDRIQLDDVCWRPYEKHREIQDFEEVFWYSGWIM 253
           Y E+ P A R+    GH     Y + LDR+++DDV +  Y+ H +   F+++  +  WI 
Sbjct: 883 YTEDRPHATRFSLAMGHKSPNNYMTFLDRVEVDDVSFNQYDFHHQTCPFDDIS*FFRWIE 704

Query: 254 CGVRRVYRHLPERVLRQYGYVQTIPRHP 281
           C  +  Y HL E V++ YG++Q+  RHP
Sbjct: 703 CDRKMNYHHLLELVMK*YGHIQSTLRHP 620


>BG454068 weakly similar to GP|22202804|dbj hypothetical protein~predicted by
           GeneMark.hmm etc. {Oryza sativa (japonica
           cultivar-group)}, partial (5%)
          Length = 673

 Score = 68.2 bits (165), Expect = 6e-12
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
 Frame = +3

Query: 1   MPMGEMTVTLDDVACLTHLPIEGRMLAHGKKMPRHEGAALLMTYLGVSQNEAEKICNQEY 60
           +P+GEMT+ LDD++CL H+P+ G +L H + +  H+G   L+ YLG+   E      +  
Sbjct: 387 LPVGEMTIALDDISCLLHIPVGGNLLFH-ESLSIHQGTEYLVNYLGLEFEEIAAETKRLK 563

Query: 61  GGYISYPRLRDFYTSYLGRANVLA---GTEDPEE 91
             +I+Y  L   YTSYL  A   A   G ED  E
Sbjct: 564 SAHITYDTLLSIYTSYLTEAKSYANQPGEEDSME 665


>TC83983 similar to GP|19386796|dbj|BAB86175. putative alpha-glucosidase 1
           {Oryza sativa (japonica cultivar-group)}, partial (11%)
          Length = 656

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 13/60 (21%), Positives = 27/60 (44%), Gaps = 5/60 (8%)
 Frame = -2

Query: 331 VSHPQILPPIPRDLPRPANEEQI-----IAEQWQRYEARSSPDTYDMVSGVVAYADAQLG 385
           +SHP++      D+ RP+++  +     I E W  +  R   D +   + + A+ +   G
Sbjct: 562 LSHPRVYKHASSDIYRPSHQSTLIQPSKIVESWHEFRDRDKDDMFPNTNSLCAHLETDRG 383


>BQ751278 similar to PIR|T37665|T37 probable t-complex protein 1  epsilon
           subunit - fission yeast (Schizosaccharomyces pombe),
           partial (26%)
          Length = 596

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 21/71 (29%), Positives = 32/71 (44%), Gaps = 1/71 (1%)
 Frame = +1

Query: 360 RYEARSSPDTYDMV-SGVVAYADAQLGQEEVMSMTPQQWFEAMTHMREQIAPILTRRRAQ 418
           R E R+ P  Y    SG    A  Q  ++E  S  P    +   H ++ + P  +R+   
Sbjct: 115 RDEGRAGPSLYRRQRSGKEEEAIWQRSRQEPHSRRP----DCREHCQDLLGPPRSRQDPH 282

Query: 419 RPRRRHHQQDQ 429
            PRRRHH  ++
Sbjct: 283 FPRRRHHSDER 315


>TC84221 GP|1150487|emb|CAA91117.1 hypothetical protein {Lactobacillus
           sakei}, partial (3%)
          Length = 782

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 14/47 (29%)
 Frame = +1

Query: 228 VCWRPYEKHRE------------IQDFEEVFWYS--GWIMCGVRRVY 260
           +CW PY + +              QDF E  W+S  G   CGV  VY
Sbjct: 175 ICWHPYNRRKHGSNDCNLSFQFMHQDFNEELWWSTEGIKGCGVLPVY 315


>BF646615 homologue to PIR|T48395|T483 GT2-like protein - Arabidopsis
           thaliana, partial (16%)
          Length = 654

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = -2

Query: 13  VACLTHLPIEG----RMLAHGKKMPRHEGA-ALLMTYLGVS 48
           V+CL HLP+E     + +    K+P +EG  AL++  +GV+
Sbjct: 365 VSCLGHLPVEASTAMKAVVSASKLPLNEGVEALVVVLVGVA 243


>TC80565 weakly similar to GP|14335072|gb|AAK59800.1 AT5g20050/F28I16_200
            {Arabidopsis thaliana}, partial (81%)
          Length = 1581

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +2

Query: 81   NVLAGTEDPEELEELARVRTYC---VRCYLLYLVGCLLFGDR 119
            ++LA  EDP +L  LAR+ T     V C   Y +G  +F  R
Sbjct: 1325 DLLADDEDPTDLNNLARLLTPVSSNVECTSTYSLGSTIFSGR 1450


>TC93913 similar to GP|18087608|gb|AAL58934.1 AT3g51050/F24M12_90
           {Arabidopsis thaliana}, partial (7%)
          Length = 567

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +3

Query: 214 ITYRSLLDRIQLDDVCW-----RPYEKHREIQDFEEVFWYSGWIMCGVRR 258
           +T ++L D  +   VC      R  E HR   DFEEV +  GW++   R+
Sbjct: 204 LTLQALTDEAEDKAVCASYGASRLLEMHRM*GDFEEVLYCLGWMIVKFRQ 353


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.324    0.140    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,566,409
Number of Sequences: 36976
Number of extensions: 213136
Number of successful extensions: 1352
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of query: 430
length of database: 9,014,727
effective HSP length: 99
effective length of query: 331
effective length of database: 5,354,103
effective search space: 1772208093
effective search space used: 1772208093
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)