BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138087.10 + phase: 0
(242 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81745 similar to PIR|JC7234|JC7234 27k vesicle-associated memb... 476 e-135
TC87254 similar to PIR|JC7234|JC7234 27k vesicle-associated memb... 323 4e-89
TC78518 similar to PIR|JC7234|JC7234 27k vesicle-associated memb... 315 8e-87
TC90632 similar to GP|21554053|gb|AAM63134.1 putative VAMP-assoc... 265 1e-71
BG452644 similar to GP|21554053|gb putative VAMP-associated prot... 246 6e-66
AW775086 similar to PIR|JC7234|JC7 27k vesicle-associated membra... 181 2e-46
BI266722 similar to GP|17473763|gb| putative protein {Arabidopsi... 164 2e-41
BQ124398 weakly similar to PIR|JC7234|JC72 27k vesicle-associate... 134 4e-32
CA917079 weakly similar to PIR|B86220|B86 protein F22O13.31 [imp... 114 4e-26
TC78864 similar to GP|17979373|gb|AAL49912.1 putative membrane a... 64 5e-11
TC90191 similar to GP|8809582|dbj|BAA97133.1 membrane associated... 61 4e-10
TC88076 similar to GP|17979373|gb|AAL49912.1 putative membrane a... 60 1e-09
AW774166 similar to GP|17979373|gb| putative membrane associated... 33 0.076
BQ752476 similar to GP|22294910|db ORF_ID:tll1186~hypothetical p... 31 0.38
TC88651 31 0.49
TC91788 auxin efflux carrier protein [Medicago truncatula] 30 0.84
BG586735 similar to GP|11275527|db putative receptor-like protei... 29 1.4
TC91793 similar to GP|11275527|dbj|BAB18292. putative receptor-l... 29 1.4
TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean... 29 1.4
TC88392 similar to GP|11275527|dbj|BAB18292. putative receptor-l... 29 1.9
>TC81745 similar to PIR|JC7234|JC7234 27k vesicle-associated membrane
protein-associated protein - curled-leaved tobacco,
partial (94%)
Length = 945
Score = 476 bits (1225), Expect = e-135
Identities = 241/242 (99%), Positives = 241/242 (99%)
Frame = +2
Query: 1 MSPDGDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIV 60
MSPDGDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIV
Sbjct: 101 MSPDGDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIV 280
Query: 61 LPRSTCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEEC 120
LPRSTCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEEC
Sbjct: 281 LPRSTCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEEC 460
Query: 121 KLRVVYVSPPQPPSPVPEGSEEGSSPRGSFSENGNANGPEFAQVTRGSAERPEAQDKSAE 180
KLRVVYVSPPQPPSPVPEGSEEGSSPRGSFSENGNANGPEFAQVT GSAERPEAQDKSAE
Sbjct: 461 KLRVVYVSPPQPPSPVPEGSEEGSSPRGSFSENGNANGPEFAQVTIGSAERPEAQDKSAE 640
Query: 181 ARALISRLTEEKNNAIQQTSRLRQELELLKREGNRNRGGVSFIIVILIGLLGLIMGYLMK 240
ARALISRLTEEKNNAIQQTSRLRQELELLKREGNRNRGGVSFIIVILIGLLGLIMGYLMK
Sbjct: 641 ARALISRLTEEKNNAIQQTSRLRQELELLKREGNRNRGGVSFIIVILIGLLGLIMGYLMK 820
Query: 241 KA 242
KA
Sbjct: 821 KA 826
>TC87254 similar to PIR|JC7234|JC7234 27k vesicle-associated membrane
protein-associated protein - curled-leaved tobacco,
partial (87%)
Length = 1040
Score = 323 bits (828), Expect = 4e-89
Identities = 154/237 (64%), Positives = 198/237 (82%)
Frame = +2
Query: 5 GDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRS 64
G+LL I P EL+FPFEL+KQISCSLQLSNK+D+Y+AFKVKTTNP+KYCVRPN G+VLPRS
Sbjct: 74 GELLQIHPQELQFPFELRKQISCSLQLSNKSDNYIAFKVKTTNPKKYCVRPNNGVVLPRS 253
Query: 65 TCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEECKLRV 124
TCD+ VTMQ QKEAP DMQCKDKFLLQSV + G + KDI+ EMFNKE+G+ V+ECKLRV
Sbjct: 254 TCDITVTMQGQKEAPPDMQCKDKFLLQSVVASPGATAKDITPEMFNKESGYEVDECKLRV 433
Query: 125 VYVSPPQPPSPVPEGSEEGSSPRGSFSENGNANGPEFAQVTRGSAERPEAQDKSAEARAL 184
VYV+PPQPPSPV EGS+E SSPR S SENG+++ +F Q ++ ER E +D S +AR L
Sbjct: 434 VYVAPPQPPSPVREGSDEESSPRASVSENGHSSAVQF-QASKAFNERVEPKDTSFQARTL 610
Query: 185 ISRLTEEKNNAIQQTSRLRQELELLKREGNRNRGGVSFIIVILIGLLGLIMGYLMKK 241
IS++TEE+N+ I+Q RL+QEL+LL+R ++RGG+ + VI++GL+GLI+G+L+K+
Sbjct: 611 ISKVTEERNSVIEQNKRLQQELDLLRRAAKQSRGGIPLMYVIIVGLVGLILGFLLKR 781
>TC78518 similar to PIR|JC7234|JC7234 27k vesicle-associated membrane
protein-associated protein - curled-leaved tobacco,
partial (83%)
Length = 827
Score = 315 bits (808), Expect = 8e-87
Identities = 157/237 (66%), Positives = 195/237 (82%)
Frame = +1
Query: 5 GDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRS 64
G+LL+I+P EL+FPFEL+KQISCSLQLSNKTD+YVAFKVKTTNP+KYCVRPN+G+VLPRS
Sbjct: 91 GELLNIQPDELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNSGVVLPRS 270
Query: 65 TCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEECKLRV 124
TCDV VTMQAQKEAP+DMQCKDKFLLQSV + G + KDI+ EMF+KEAGH VEECKLRV
Sbjct: 271 TCDVTVTMQAQKEAPSDMQCKDKFLLQSVIASPGTTTKDINPEMFSKEAGHNVEECKLRV 450
Query: 125 VYVSPPQPPSPVPEGSEEGSSPRGSFSENGNANGPEFAQVTRGSAERPEAQDKSAEARAL 184
VYV+PP PPSPV EGS+E SSP S SENG++N EF +R ER E Q + E A
Sbjct: 451 VYVAPPGPPSPVREGSDEDSSP-DSVSENGHSNVTEFTAASRTFNERDEHQGPTFETSAQ 627
Query: 185 ISRLTEEKNNAIQQTSRLRQELELLKREGNRNRGGVSFIIVILIGLLGLIMGYLMKK 241
+S++TEE+N+AI Q RL+QE+ELL+R+ +R+RGG+S V L+ ++G I+GYL ++
Sbjct: 628 VSKVTEERNSAIDQQRRLQQEVELLRRQVSRSRGGISLTYVGLVAVIGFILGYLFER 798
>TC90632 similar to GP|21554053|gb|AAM63134.1 putative VAMP-associated
protein {Arabidopsis thaliana}, partial (63%)
Length = 681
Score = 265 bits (677), Expect = 1e-71
Identities = 128/154 (83%), Positives = 139/154 (90%)
Frame = +1
Query: 1 MSPDGDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIV 60
M GDLL+IEP+ELKF FELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTG+V
Sbjct: 166 MMSTGDLLNIEPVELKFLFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGVV 345
Query: 61 LPRSTCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEEC 120
LP+STC+V+VTMQAQKE P DMQCKDKFLLQSV+ NDG K+I+ EMFNKEAGHVVEEC
Sbjct: 346 LPQSTCEVIVTMQAQKEVPPDMQCKDKFLLQSVRVNDGADAKEITPEMFNKEAGHVVEEC 525
Query: 121 KLRVVYVSPPQPPSPVPEGSEEGSSPRGSFSENG 154
KLRVVYV+PPQP SPVPE SEEGSSPR S +ENG
Sbjct: 526 KLRVVYVAPPQPQSPVPESSEEGSSPRXSVTENG 627
>BG452644 similar to GP|21554053|gb putative VAMP-associated protein
{Arabidopsis thaliana}, partial (61%)
Length = 629
Score = 246 bits (628), Expect = 6e-66
Identities = 126/179 (70%), Positives = 137/179 (76%), Gaps = 27/179 (15%)
Frame = +2
Query: 1 MSPDGDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIV 60
M GDLL+IEP+ELKF FELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTG+V
Sbjct: 77 MMSTGDLLNIEPVELKFLFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGVV 256
Query: 61 LPRSTCDVM---------------------------VTMQAQKEAPADMQCKDKFLLQSV 93
LP+STC+V+ VTMQAQKE P DMQCKDKFLLQSV
Sbjct: 257 LPQSTCEVIGIACYIIFSFLF*FFAG*WHCDLWLFIVTMQAQKEVPPDMQCKDKFLLQSV 436
Query: 94 KTNDGVSPKDISAEMFNKEAGHVVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSFSE 152
+ NDG K+I+ EMFNKEAGHVVEECKLRVVYV+PPQP SPVP SEEGSSPRGS +E
Sbjct: 437 RVNDGADAKEITPEMFNKEAGHVVEECKLRVVYVAPPQPQSPVPXSSEEGSSPRGSVTE 613
>AW775086 similar to PIR|JC7234|JC7 27k vesicle-associated membrane
protein-associated protein - curled-leaved tobacco,
partial (52%)
Length = 747
Score = 181 bits (460), Expect = 2e-46
Identities = 100/208 (48%), Positives = 129/208 (61%)
Frame = +2
Query: 4 DGDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPR 63
D L I P EL FPFELKKQIS S Q+SNK+D+Y+AFKVKTT P KYCVRPN G+VLPR
Sbjct: 32 DSLYLQIHPQELHFPFELKKQISISFQMSNKSDNYLAFKVKTTIPEKYCVRPNNGVVLPR 211
Query: 64 STCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEECKLR 123
STCD+ VTMQAQK+AP +M C DKFL+QS+ G + +DI++EMF +++G+ VE CKLR
Sbjct: 212 STCDIQVTMQAQKKAPPNMHCIDKFLIQSIVAKPGATTEDITSEMFFQDSGYKVEMCKLR 391
Query: 124 VVYVSPPQPPSPVPEGSEEGSSPRGSFSENGNANGPEFAQVTRGSAERPEAQDKSAEARA 183
VVY +PP P P P A+ E +A+
Sbjct: 392 VVYDAPP-PNLPSP-------------------------------AQASEFDLLDIQAKD 475
Query: 184 LISRLTEEKNNAIQQTSRLRQELELLKR 211
IS+LT E N+ ++ +L+QEL + KR
Sbjct: 476 QISKLTMEINDGNEKNKKLQQELNIRKR 559
>BI266722 similar to GP|17473763|gb| putative protein {Arabidopsis thaliana},
partial (28%)
Length = 404
Score = 164 bits (416), Expect = 2e-41
Identities = 82/101 (81%), Positives = 89/101 (87%), Gaps = 4/101 (3%)
Frame = +2
Query: 1 MSPDGDLLSIEPLELKFPF----ELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPN 56
M GDLL+IEP+ELKF F ELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPN
Sbjct: 101 MMSTGDLLNIEPVELKFLFSVSVELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPN 280
Query: 57 TGIVLPRSTCDVMVTMQAQKEAPADMQCKDKFLLQSVKTND 97
TG+VLP+STC+V+VTMQAQKE P DMQCKDK LLQSV+ ND
Sbjct: 281 TGVVLPQSTCEVIVTMQAQKEVPPDMQCKDKXLLQSVRVND 403
>BQ124398 weakly similar to PIR|JC7234|JC72 27k vesicle-associated membrane
protein-associated protein - curled-leaved tobacco,
partial (27%)
Length = 586
Score = 134 bits (336), Expect = 4e-32
Identities = 68/100 (68%), Positives = 81/100 (81%)
Frame = +2
Query: 142 EGSSPRGSFSENGNANGPEFAQVTRGSAERPEAQDKSAEARALISRLTEEKNNAIQQTSR 201
EGSSPRGS +ENGNANG + V RG ER +KSAEA+AL+ RLTEEKNNAIQ S+
Sbjct: 20 EGSSPRGSVTENGNANGSDSTTVMRGFTERNGTPEKSAEAKALMLRLTEEKNNAIQLNSK 199
Query: 202 LRQELELLKREGNRNRGGVSFIIVILIGLLGLIMGYLMKK 241
LRQEL++L+R+ N++RG VS I VILIGLLGLIMGYL+KK
Sbjct: 200 LRQELDMLRRQSNKSRGNVSMIFVILIGLLGLIMGYLLKK 319
>CA917079 weakly similar to PIR|B86220|B86 protein F22O13.31 [imported] -
Arabidopsis thaliana, partial (23%)
Length = 487
Score = 114 bits (284), Expect = 4e-26
Identities = 62/168 (36%), Positives = 96/168 (56%)
Frame = +1
Query: 39 VAFKVKTTNPRKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDG 98
VAFKVKTT+P+KY VRPN G++ P++T + +VTMQAQ+ AP D+ CKDKFL+QS +
Sbjct: 1 VAFKVKTTSPKKYSVRPNVGVLAPKATSEFIVTMQAQRVAPEDLVCKDKFLVQSTLVDAE 180
Query: 99 VSPKDISAEMFNKEAGHVVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSFSENGNANG 158
++ +D+++ +F K+ +EE KL+V +SPP P VP G S G E +G
Sbjct: 181 ITTEDVTSSLFVKDGLRYIEENKLKVALISPPDSPELVP---VNGDSKNGFHHEKVQIHG 351
Query: 159 PEFAQVTRGSAERPEAQDKSAEARALISRLTEEKNNAIQQTSRLRQEL 206
+ ++ + P K + I T+ N I++ L+ E+
Sbjct: 352 KDEIEI---QSPEPMVLKKPEHNKVHIPEHTKVCNVEIEEDMELKVEM 486
>TC78864 similar to GP|17979373|gb|AAL49912.1 putative membrane associated
protein {Arabidopsis thaliana}, partial (71%)
Length = 1303
Score = 63.9 bits (154), Expect = 5e-11
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Frame = +2
Query: 12 PLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPR----STCD 67
P +L FP+E KQ+ ++ + N S+VAFK +TT P+ +RP GI+ P +T
Sbjct: 437 PNKLYFPYEPGKQVRSAITIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVF 616
Query: 68 VMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEECKLRVVYV 127
V E P D + + KF + S+K D E+F+++ V E LRVV++
Sbjct: 617 KFVEPPENNEKPTDQKSRVKFKIMSLKVQ---GEMDYVPELFDEQRDQVAVEQILRVVFL 787
Query: 128 SP 129
P
Sbjct: 788 DP 793
>TC90191 similar to GP|8809582|dbj|BAA97133.1 membrane associated protein
{Arabidopsis thaliana}, partial (64%)
Length = 839
Score = 60.8 bits (146), Expect = 4e-10
Identities = 43/128 (33%), Positives = 67/128 (51%), Gaps = 4/128 (3%)
Frame = +1
Query: 15 LKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRSTCDV----MV 70
L FP+E KQ+ +++L N + S+VAFK +TT P+ +RP GI+ P + V
Sbjct: 286 LYFPYEPGKQVRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGILAPGESVIAAVFKFV 465
Query: 71 TMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEECKLRVVYVSPP 130
E ++ + K KF + S+K GV D E+F+++ V E L VV++ P
Sbjct: 466 EQPENNEKLSNQKNKVKFKIMSLKVKLGV---DYVPELFDEQRDLVTVERILGVVFLD-P 633
Query: 131 QPPSPVPE 138
+ PSP E
Sbjct: 634 ERPSPALE 657
>TC88076 similar to GP|17979373|gb|AAL49912.1 putative membrane associated
protein {Arabidopsis thaliana}, partial (65%)
Length = 1165
Score = 59.7 bits (143), Expect = 1e-09
Identities = 42/136 (30%), Positives = 74/136 (53%), Gaps = 5/136 (3%)
Frame = +1
Query: 8 LSIEPL-ELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRSTC 66
L ++P +L FP+E KQ+ ++++ N + S VAFK +TT P+ +RP I+ P +
Sbjct: 340 LKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGES- 516
Query: 67 DVMVTMQAQKEAPADMQCKD----KFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEECKL 122
++ T+ E P + + + KF + S+K + D E+F+++ V E L
Sbjct: 517 -IIATVFKFVEQPENNEKPEKSGLKFKIMSLKVKGSI---DYVPELFDEQKDQVAVEQIL 684
Query: 123 RVVYVSPPQPPSPVPE 138
RVV++ P+ PSP+ E
Sbjct: 685 RVVFLD-PERPSPILE 729
>AW774166 similar to GP|17979373|gb| putative membrane associated protein
{Arabidopsis thaliana}, partial (21%)
Length = 656
Score = 33.5 bits (75), Expect = 0.076
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 12 PLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKY 51
P +L FP+E KQ+ ++ + N S+VAFKV +P Y
Sbjct: 317 PNKLYFPYEPGKQVRSAITIKNTCKSHVAFKVWFISPFTY 436
>BQ752476 similar to GP|22294910|db ORF_ID:tll1186~hypothetical protein
{Thermosynechococcus elongatus BP-1}, partial (19%)
Length = 755
Score = 31.2 bits (69), Expect = 0.38
Identities = 22/72 (30%), Positives = 31/72 (42%)
Frame = -3
Query: 129 PPQPPSPVPEGSEEGSSPRGSFSENGNANGPEFAQVTRGSAERPEAQDKSAEARALISRL 188
PP PSP P GS SSP S S + + P + + SA P +A R S
Sbjct: 585 PPPRPSPTPSGSP--SSPTTSPSSSTSTRTPGSSTASPTSARGPPTCTSAATRRRATSTR 412
Query: 189 TEEKNNAIQQTS 200
+A ++T+
Sbjct: 411 PSSSPSATRRTA 376
>TC88651
Length = 698
Score = 30.8 bits (68), Expect = 0.49
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Frame = -2
Query: 130 PQPPSPVPEGSEEGSSPRGSFSENGNANGP---------EFAQVTRGSAERPEAQDK 177
PQ P+ + ++PRGS+S N + N P F +VTR A R E Q+K
Sbjct: 343 PQRRPPIRRTNLPLTTPRGSYSNNRSRN*PLTFILRRN*RFRRVTRRCATRNEFQEK 173
>TC91788 auxin efflux carrier protein [Medicago truncatula]
Length = 2076
Score = 30.0 bits (66), Expect = 0.84
Identities = 26/127 (20%), Positives = 44/127 (34%)
Frame = +1
Query: 33 NKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPADMQCKDKFLLQS 92
N+TD Y F+ K +P+ T D+ ++ P +D+ L
Sbjct: 769 NQTDFYAMFQSKAPSPK----HGYTNSFQSNGNGDIYSMQSSKGATPRTSNFEDETLRMH 936
Query: 93 VKTNDGVSPKDISAEMFNKEAGHVVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSFSE 152
K + +S E+FN + PP+P+ GS + +
Sbjct: 937 KKRGG----RSMSGELFNNGGSY---------------PPPNPMLSGSTSAGTKKKDSMG 1059
Query: 153 NGNANGP 159
G+ NGP
Sbjct: 1060GGSGNGP 1080
>BG586735 similar to GP|11275527|db putative receptor-like protein kinase
{Oryza sativa (japonica cultivar-group)}, partial (57%)
Length = 794
Score = 29.3 bits (64), Expect = 1.4
Identities = 17/61 (27%), Positives = 29/61 (46%)
Frame = -1
Query: 26 SCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPADMQCK 85
SC + L N DS + T P ++C+ G++ P S+ V+M + ++ P Q
Sbjct: 737 SCQVFLLNLLDSIINLVECTLQPHRHCIYQCFGLLNP*SSLLDKVSMHSLEDLPFLHQAS 558
Query: 86 D 86
D
Sbjct: 557 D 555
>TC91793 similar to GP|11275527|dbj|BAB18292. putative receptor-like protein
kinase {Oryza sativa (japonica cultivar-group)}, partial
(28%)
Length = 781
Score = 29.3 bits (64), Expect = 1.4
Identities = 17/61 (27%), Positives = 29/61 (46%)
Frame = -2
Query: 26 SCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPADMQCK 85
SC + L N DS + T P ++C+ G++ P S+ V+M + ++ P Q
Sbjct: 408 SCQVFLLNLLDSIINLVECTLQPHRHCIYQCFGLLNP*SSLLDKVSMHSLEDLPFLHQAS 229
Query: 86 D 86
D
Sbjct: 228 D 226
>TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean, partial
(93%)
Length = 1554
Score = 29.3 bits (64), Expect = 1.4
Identities = 12/31 (38%), Positives = 18/31 (57%)
Frame = -2
Query: 124 VVYVSPPQPPSPVPEGSEEGSSPRGSFSENG 154
V++ SPP PP+ S+ +P SF+ NG
Sbjct: 350 VIHKSPPAPPTDTTADSDTAPAPAPSFNLNG 258
>TC88392 similar to GP|11275527|dbj|BAB18292. putative receptor-like protein
kinase {Oryza sativa (japonica cultivar-group)}, partial
(61%)
Length = 1017
Score = 28.9 bits (63), Expect = 1.9
Identities = 17/61 (27%), Positives = 29/61 (46%)
Frame = -3
Query: 26 SCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPADMQCK 85
SC + L N DS + T P ++C+ G++ P S+ V+M + ++ P Q
Sbjct: 1003 SCQVFLLNWLDSIINLVECTLQPHRHCIYQCFGLLNP*SSSLDKVSMHSLEDLPFLHQAS 824
Query: 86 D 86
D
Sbjct: 823 D 821
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,229,004
Number of Sequences: 36976
Number of extensions: 84522
Number of successful extensions: 782
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of query: 242
length of database: 9,014,727
effective HSP length: 93
effective length of query: 149
effective length of database: 5,575,959
effective search space: 830817891
effective search space used: 830817891
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Medicago: description of AC138087.10