TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC138011.4 + phase: 0 
         (505 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC83096 weakly similar to PIR|T45912|T45912 hypothetical protein...   158  5e-39
TC83471 similar to PIR|T45912|T45912 hypothetical protein F5K20....   135  4e-32
AL376050 similar to GP|10178015|dbj Na+/H+ antiporter-like prote...    42  7e-04

>TC83096 weakly similar to PIR|T45912|T45912 hypothetical protein F5K20.20 -
           Arabidopsis thaliana, partial (21%)
          Length = 1227

 Score =  158 bits (399), Expect = 5e-39
 Identities = 119/376 (31%), Positives = 182/376 (47%), Gaps = 19/376 (5%)
 Frame = +2

Query: 121 IYKPRKRFEQNKLKTIQKLRLDAELRILTCVHNARQATGVISLVESFNAT-RISPIHVFA 179
           IYKP ++        +   +   +LRIL C+H       +I+ +ES  AT + S I ++ 
Sbjct: 11  IYKPSRQRRSGNPPPLTDTQ--EKLRILACIHGTGNIPSLINFIESVRATNKSSKIKLYV 184

Query: 180 LYLIELKGRTGALVAAHMDKPSNQPGAQNLTRSQVEQESINNTFEALGEAYDAVRVETLN 239
           + L EL   + +++     + S  P      +  +++      F A G+    V V  L 
Sbjct: 185 MQLTELTDSSSSILMVRSSRKSGFPFINRFQKGTMQE-----AFRACGQV-GQVTVHHLT 346

Query: 240 VVSSYSTIHEDIYNSANEKRTSMIILPFHKHLSSLG--ALETTSVAYKDINQNVMQTSPC 297
            +SS STIHEDI + A EK  +MIILPFHK         +E     ++++NQ V+Q++PC
Sbjct: 347 SISSLSTIHEDICHIAEEKGVAMIILPFHKRWRGEDEETIEDIGQRWREVNQRVLQSAPC 526

Query: 298 SVGIFVDRNLGSITKMNF--------RICMIFIGGPDDHEALAVAWRMVGHPGTRLSLVR 349
           SV + V+R +G   +           ++C+IF+GGPDD + L +  RM  HP  RLS+VR
Sbjct: 527 SVAVLVNRGVGRRYEQRVETSATPGKKVCIIFVGGPDDRKVLELGSRMAEHPAIRLSVVR 706

Query: 350 MLLFDEAAEVNIISHYEVQGILSVVMDN--EKQKDLDEEYVNSFRLKAVNNNDSISYSEV 407
             L +E    +    Y      S   DN  E +K+LDE  +N F+ K +    ++ Y E 
Sbjct: 707 FNLHNEGTFRDQEHSYNTSTSAS---DNNMENEKELDEVALNEFKTKWLG---AVEYIE- 865

Query: 408 DVHSSEDIPTILNDLDKFG----YDLYIVGQGHH--RNVRAFSSLLEWCDCPELGVIGDM 461
                 D   I N++   G    Y+L IVG+GH    +           +  ELG IGD+
Sbjct: 866 -----NDTVNIANEVLAIGRVKEYELVIVGKGHQLLNSTGMIDIKDSQLEHAELGPIGDL 1030

Query: 462 LASNNFSSGSSVLVVQ 477
           L S+     SSVLV+Q
Sbjct: 1031LTSSAQGITSSVLVIQ 1078


>TC83471 similar to PIR|T45912|T45912 hypothetical protein F5K20.20 -
           Arabidopsis thaliana, partial (18%)
          Length = 983

 Score =  135 bits (340), Expect = 4e-32
 Identities = 90/272 (33%), Positives = 140/272 (51%), Gaps = 25/272 (9%)
 Frame = +3

Query: 233 VRVETLNVVSSYSTIHEDIYNSANEKRTSMIILPFHKHL----------SSLGALETTSV 282
           V V +   +SS ST+HEDI ++A EKR +MIILPFHKH            +   LE    
Sbjct: 15  VIVRSTTAISSLSTMHEDICHAAEEKRVTMIILPFHKHWRMEVDDENDKEAHEVLENAGH 194

Query: 283 AYKDINQNVMQTSPCSVGIFVDR-------NLGSITKMNFRICMIFIGGPDDHEALAVAW 335
            ++ +NQ V++ +PCSV + VDR       NLGS  ++  RIC++F GGPDD EAL +  
Sbjct: 195 GWRGVNQRVLKNAPCSVAVLVDRGYGLGLKNLGSDGRVAQRICIVFFGGPDDREALELGK 374

Query: 336 RMVGHPGTRLSLVRMLLFDEAAEVNII-------SHYEVQGILSVVMDNEKQKDLDEEYV 388
           +MV HP   +++VR +  +E +  N +       S  E        ++ +K++ LDE  +
Sbjct: 375 KMVEHPAVVVTVVRFVEQNELSGNNFVLRQSPGKSTEENYSFSIAKINRQKEQVLDENAM 554

Query: 389 NSFRLKAVNNNDSISYSEVDVHSSEDIPTILNDLDKFGYDLYIVGQGHHRNVRAFSSLLE 448
             FR K     +++ Y  ++  S   +  ++   +   YDL +VG+G   +         
Sbjct: 555 EEFRSKC---GETVKY--IEKGSGNVVEEVIALGESADYDLIVVGKGRFPSTMVAELAER 719

Query: 449 WCDCPELGVIGDMLASN-NFSSGSSVLVVQQY 479
             +  ELG IGD+L S+      SSV V+QQ+
Sbjct: 720 EAEHAELGPIGDILTSSMGHKMASSVFVIQQH 815


>AL376050 similar to GP|10178015|dbj Na+/H+ antiporter-like protein
           {Arabidopsis thaliana}, partial (3%)
          Length = 521

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 30/85 (35%), Positives = 46/85 (53%), Gaps = 1/85 (1%)
 Frame = +2

Query: 399 NDSISYSEVDVHSSEDIPTILNDLDKFGY-DLYIVGQGHHRNVRAFSSLLEWCDCPELGV 457
           +DS+ Y E  V   +D    +  + KF   +L++VG    R     +  LE  +CPELG 
Sbjct: 2   DDSVIYEEKIV---KDAAETVASIRKFNSCNLFLVGL---RPTGELACALERRECPELGP 163

Query: 458 IGDMLASNNFSSGSSVLVVQQYGYG 482
           +G +L S +  + +SVLV+QQY  G
Sbjct: 164 VGGLLISQDCPTTASVLVMQQYHNG 238


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.135    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,766,928
Number of Sequences: 36976
Number of extensions: 168571
Number of successful extensions: 866
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of query: 505
length of database: 9,014,727
effective HSP length: 100
effective length of query: 405
effective length of database: 5,317,127
effective search space: 2153436435
effective search space used: 2153436435
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)