BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137986.3 + phase: 0
(571 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC92705 similar to GP|13605811|gb|AAK32891.1 AT5g36940/MLF18_60 ... 325 4e-89
TC89037 similar to GP|13605811|gb|AAK32891.1 AT5g36940/MLF18_60 ... 270 1e-72
TC88678 similar to PIR|S51171|S51171 amino acid transport protei... 251 4e-67
TC79853 similar to GP|13605811|gb|AAK32891.1 AT5g36940/MLF18_60 ... 236 8e-63
TC89872 similar to GP|14140148|emb|CAC39065. putative protein {O... 204 6e-53
TC83842 similar to PIR|S51171|S51171 amino acid transport protei... 184 6e-47
TC93431 similar to GP|13605811|gb|AAK32891.1 AT5g36940/MLF18_60 ... 129 3e-30
AW585613 PIR|T48473|T48 amino acid transport-like protein - Arab... 125 6e-29
AW736107 similar to GP|13605811|gb| AT5g36940/MLF18_60 {Arabidop... 110 1e-24
CA920845 weakly similar to GP|10178213|dbj cationic amino acid t... 108 4e-24
AJ502603 weakly similar to GP|2116759|dbj| YfnA {Bacillus subtil... 74 2e-13
TC91985 similar to PIR|A86307|A86307 amino acid transporter homo... 57 3e-08
TC93809 similar to PIR|H86428|H86428 hypothetical protein AAF197... 37 0.027
BE942281 similar to GP|8567793|gb| amino acid transporter putat... 28 7.3
TC87791 similar to GP|3659909|gb|AAC61600.1| histidyl-tRNA synth... 28 9.5
TC77887 similar to GP|21594695|gb|AAM66034.1 unknown {Arabidopsi... 28 9.5
TC78381 similar to GP|14335166|gb|AAK59863.1 AT3g25860/MPE11_1 {... 28 9.5
>TC92705 similar to GP|13605811|gb|AAK32891.1 AT5g36940/MLF18_60
{Arabidopsis thaliana}, partial (22%)
Length = 698
Score = 325 bits (832), Expect = 4e-89
Identities = 161/164 (98%), Positives = 161/164 (98%)
Frame = +3
Query: 1 MGGGVSQKGSWILFFTRRKQVDSPRQNTKPLLAKELSVYHLIAIGVGSTIGAGVYVLVGT 60
MGGGVSQKGSWILFFTRRKQVDSPRQNTKPLLAKELSVYHLIAIGVGSTIGAGVYVLVGT
Sbjct: 207 MGGGVSQKGSWILFFTRRKQVDSPRQNTKPLLAKELSVYHLIAIGVGSTIGAGVYVLVGT 386
Query: 61 VAREHSGPALAISFLIAGLAAGLSAFCYAELACRCPSAGSAYHYSYICLGEGVAWLIGWA 120
VAREHSGPALAISFLIAGLAAGLSAFCYAELACRCPSAGSAYHYSYICLGE VAWLIGWA
Sbjct: 387 VAREHSGPALAISFLIAGLAAGLSAFCYAELACRCPSAGSAYHYSYICLGESVAWLIGWA 566
Query: 121 LLLEYTIGSAAVARGITPNLAPLFGGLDNLPFFLSRQHIPGIDI 164
LLLEYTIGSAAVARGITPNLAPLFGGLDNL FLSRQHIPGIDI
Sbjct: 567 LLLEYTIGSAAVARGITPNLAPLFGGLDNLTVFLSRQHIPGIDI 698
>TC89037 similar to GP|13605811|gb|AAK32891.1 AT5g36940/MLF18_60
{Arabidopsis thaliana}, partial (39%)
Length = 1337
Score = 270 bits (689), Expect = 1e-72
Identities = 149/257 (57%), Positives = 189/257 (72%), Gaps = 4/257 (1%)
Frame = +3
Query: 273 ASLFLCCGMYMLVSVVVVGLVPYYAIDPDTPISSAFSDHGMQWAAYIINAGACTALISAL 332
ASL LCCG+YM+VS+VVVGLVPYY I+P+TPISSAF+ +GMQWAAYIINAGA TAL S+L
Sbjct: 3 ASLSLCCGLYMIVSIVVVGLVPYYDINPNTPISSAFAVNGMQWAAYIINAGALTALCSSL 182
Query: 333 MGGILPQPRILMAMARDGLLPPFFCDINKHTLVPVKGTIITGLAAAVLAFSMEVSDLAGM 392
+G +LPQPRILMAMARDGLLPPFF DINKH+ VPVK TI+TGL A LAF M+VS L+G+
Sbjct: 183 LGTMLPQPRILMAMARDGLLPPFFSDINKHSHVPVKSTIVTGLVPAALAFFMDVSQLSGL 362
Query: 393 VSVGTLLAFTMVAISVLILRYIPPNKVPVPPSLQDSIVEIKVEYEEENIGTSEVS---KP 449
VSVGTL+AFT+ AI+VLI+RYIPP +VP+P S Q+ I +EY ++ T++ KP
Sbjct: 363 VSVGTLIAFTISAITVLIVRYIPPIEVPLPHSRQEPIDSESMEYSWSHLETNKNDANRKP 542
Query: 450 LDVTRDFSIDYPLISKHRSKGNHL-NRRRVVGWTIAIICLGAFVLTYAASCLTFLSSVRF 508
L V D S DYPLI+K+ + + NR+++VG IA ICLG + Y C F S +F
Sbjct: 543 LIVKEDASTDYPLIAKYLAIDKYNGNRKKIVGCVIASICLGC-ICPYI--CSLFCISSQF 713
Query: 509 ALCGVGGTLLVSGFVFL 525
+ + S F++L
Sbjct: 714 C*IYIMWSWWHSSFIWL 764
Score = 84.0 bits (206), Expect = 1e-16
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1
Query: 489 GAFVLTYAASCLTFLSSVRFALCGVGGTLLVSGFVFLTCMDQDDARHDFGHSGG 542
G FVLT+AA LSSVRF LCGVGG LL+SGFVFLTC+DQDD RH+FG +GG
Sbjct: 664 GVFVLTFAACSAYLLSSVRFTLCGVGGILLLSGFVFLTCIDQDDERHNFGSTGG 825
>TC88678 similar to PIR|S51171|S51171 amino acid transport protein AAT1 -
Arabidopsis thaliana, partial (72%)
Length = 1520
Score = 251 bits (642), Expect = 4e-67
Identities = 137/383 (35%), Positives = 225/383 (57%), Gaps = 1/383 (0%)
Frame = +3
Query: 32 LAKELSVYHLIAIGVGSTIGAGVYVLVGTVAREHSGPALAISFLIAGLAAGLSAFCYAEL 91
+ K L+ + L+ G+G+ +G+G++VL G A++H+GPA+ +SF+I+G++A LS FCY E
Sbjct: 246 MKKTLNWWDLMWFGIGAVVGSGIFVLTGLEAKQHAGPAVVLSFVISGISALLSVFCYTEF 425
Query: 92 ACRCPSAGSAYHYSYICLGEGVAWLIGWALLLEYTIGSAAVARGITPNLAPLFGGLDNLP 151
A P AG ++ Y + +G+ VA++ +LLEY IG+AAVAR T A L N
Sbjct: 426 AVEIPVAGGSFAYLRVEMGDFVAFIAAGNILLEYVIGNAAVARSWTSYFATLCN--KNPD 599
Query: 152 FFLSRQHIPGIDIV-VDPCAAILVLLVTGLLCLGIKESTVVQGIVTSVNVCALLFVIVAG 210
F H D +DP A ++ +T L K S++ I T ++ ++F+++AG
Sbjct: 600 DFRIIVHNMNPDYGHLDPIAIGALVAITALAVYSTKGSSIFNYIATMFHMAVIIFIVIAG 779
Query: 211 GYMGFKSGWVGYELPTGYFPFGVDGMLAGSATVFFAYVGFDAVASTAEEVKNPQRDLPLG 270
+ + PFG+ GM++ SA +FFAY+GFDAV++ AEE KNP RD+P+G
Sbjct: 780 LIKAKPENF------NDFTPFGLHGMVSSSAVLFFAYIGFDAVSTMAEETKNPGRDIPIG 941
Query: 271 IGASLFLCCGMYMLVSVVVVGLVPYYAIDPDTPISSAFSDHGMQWAAYIINAGACTALIS 330
+ S+ + +Y L+ + + Y +D D P S AFS GM WA YI++ GA + +
Sbjct: 942 LVGSMTITTAIYCLLGATLCLMQNYKELDTDAPFSVAFSAVGMDWAKYIVSLGALKGMTT 1121
Query: 331 ALMGGILPQPRILMAMARDGLLPPFFCDINKHTLVPVKGTIITGLAAAVLAFSMEVSDLA 390
L+ + Q R L +AR ++PP+F +++ T P+ TI +A A++AF +S L+
Sbjct: 1122VLLVSAVGQARYLTHIARTHMMPPWFALVDERTGTPMNATISMLIATAIVAFFTNLSILS 1301
Query: 391 GMVSVGTLLAFTMVAISVLILRY 413
++S+ TL F++VA+++L+ RY
Sbjct: 1302SLLSISTLFIFSLVALALLVRRY 1370
>TC79853 similar to GP|13605811|gb|AAK32891.1 AT5g36940/MLF18_60
{Arabidopsis thaliana}, partial (23%)
Length = 782
Score = 236 bits (602), Expect(2) = 8e-63
Identities = 123/173 (71%), Positives = 142/173 (81%), Gaps = 6/173 (3%)
Frame = +3
Query: 10 SWILFFTRRKQVDSPR-----QNTKPL-LAKELSVYHLIAIGVGSTIGAGVYVLVGTVAR 63
SW F TRRK+VD+ +N+ + LAKEL+V L+AIGVG+TIGAGVYVLVGTVAR
Sbjct: 3 SW-RFLTRRKKVDNSHVENINKNSHGVQLAKELTVPDLMAIGVGATIGAGVYVLVGTVAR 179
Query: 64 EHSGPALAISFLIAGLAAGLSAFCYAELACRCPSAGSAYHYSYICLGEGVAWLIGWALLL 123
EH+GPAL +SF++AG+AA LSA CYAELA R PSAGSAYHY+YICLGEGVAWLIGW+L L
Sbjct: 180 EHAGPALPLSFMVAGIAAALSALCYAELASRFPSAGSAYHYAYICLGEGVAWLIGWSLTL 359
Query: 124 EYTIGSAAVARGITPNLAPLFGGLDNLPFFLSRQHIPGIDIVVDPCAAILVLL 176
E IG A +ARGITPNLA L GG+DNLP FLS QHIPGIDIVVDP AAI+V +
Sbjct: 360 EVVIGGAVIARGITPNLAALIGGMDNLPGFLSYQHIPGIDIVVDPLAAIVVFI 518
Score = 23.1 bits (48), Expect(2) = 8e-63
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 176 LVTGLLCLGIKEST 189
LVT +LC GIKE T
Sbjct: 517 LVTWILCTGIKEVT 558
>TC89872 similar to GP|14140148|emb|CAC39065. putative protein {Oryza
sativa}, partial (43%)
Length = 927
Score = 204 bits (520), Expect = 6e-53
Identities = 117/291 (40%), Positives = 180/291 (61%), Gaps = 12/291 (4%)
Frame = +1
Query: 17 RRKQVDSP-----RQNTKPLLAKELSVYHLIAIGVGSTIGAGVYVLVGTVAREHSGPALA 71
R K+V SP R N+ L++ L V+ LI +G+G++IGAG++V+ GTVA + GPA+
Sbjct: 73 RSKRVISPSEKTARDNSGHGLSRRLGVFDLILLGIGASIGAGIFVVTGTVAHD-VGPAVT 249
Query: 72 ISFLIAGLAAGLSAFCYAELACRCPSA-GSAYHYSYICLGEGVAWLIGWALLLEYTIGSA 130
+SF+ AG + ++A CYAELA R P+ G AY Y+Y E A+L+ L+L+Y IG+A
Sbjct: 250 LSFIFAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFSQLMLDYHIGAA 429
Query: 131 AVARGITPNLA------PLFGGLDNLPFFLSRQHIPGIDIVVDPCAAILVLLVTGLLCLG 184
++AR + + P+F DN+P ++ G + ++ A IL++L+T +LCLG
Sbjct: 430 SIARSLANYIVTFLEIFPVFK--DNIPKWIGHGLNIGNVLSINALAPILLILLTLILCLG 603
Query: 185 IKESTVVQGIVTSVNVCALLFVIVAGGYMGFKSGWVGYELPTGYFPFGVDGMLAGSATVF 244
++ES+ V +T + ++ VI AG + S W + + P G+ + G+ VF
Sbjct: 604 VRESSAVNSFMTVTKIIIVIVVIFAGAFEVDVSNW------SPFVPNGIRPVFTGATVVF 765
Query: 245 FAYVGFDAVASTAEEVKNPQRDLPLGIGASLFLCCGMYMLVSVVVVGLVPY 295
FAYVGFDAVA++AEE K PQRDLP+GI SL +C +Y+ V +V+ G+VPY
Sbjct: 766 FAYVGFDAVANSAEESKKPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPY 918
>TC83842 similar to PIR|S51171|S51171 amino acid transport protein AAT1 -
Arabidopsis thaliana, partial (55%)
Length = 1295
Score = 184 bits (468), Expect = 6e-47
Identities = 109/313 (34%), Positives = 169/313 (53%), Gaps = 3/313 (0%)
Frame = +3
Query: 15 FTRRK---QVDSPRQNTKPLLAKELSVYHLIAIGVGSTIGAGVYVLVGTVAREHSGPALA 71
FTR K ++ + + + K L+ + LI G+G+ +G+G++VL G ARE +GPA+
Sbjct: 366 FTRSKDYMEIVEMKARSSHQMKKTLNGWDLIWFGIGAVVGSGIFVLTGLEAREEAGPAVV 545
Query: 72 ISFLIAGLAAGLSAFCYAELACRCPSAGSAYHYSYICLGEGVAWLIGWALLLEYTIGSAA 131
+S+ ++G++A LS FCY E A P AG ++ Y + LG+ VA++ +LLEY IG+AA
Sbjct: 546 LSYAVSGISALLSVFCYTEFAVEIPVAGGSFAYLRVELGDFVAFIAAGNILLEYVIGAAA 725
Query: 132 VARGITPNLAPLFGGLDNLPFFLSRQHIPGIDIVVDPCAAILVLLVTGLLCLGIKESTVV 191
VAR T A L N + P +DP A I ++ + L L + S++
Sbjct: 726 VARSWTSYFATLCNKNPNDFRIIFHNMNPDYG-HLDPIAVIALIAIATLAVLSTRISSLF 902
Query: 192 QGIVTSVNVCALLFVIVAGGYMGFKSGWVGYELPTGYFPFGVDGMLAGSATVFFAYVGFD 251
I T ++ + F+I+ G + + PFG G+ SA +FFAY+GFD
Sbjct: 903 NKIATIFHLVVIAFIIIVGLINANPENYASFA------PFGTRGVFKASAVLFFAYIGFD 1064
Query: 252 AVASTAEEVKNPQRDLPLGIGASLFLCCGMYMLVSVVVVGLVPYYAIDPDTPISSAFSDH 311
AV++ AEE KNP RD+P+G+ S+ + +Y ++ + + Y ID + P S AFS
Sbjct: 1065AVSTMAEETKNPGRDIPIGLVGSMVIITFIYCSLATTLCLMQNYKTIDVNAPFSVAFSSV 1244
Query: 312 GMQWAAYIINAGA 324
G WA YI GA
Sbjct: 1245GWGWAKYIGALGA 1283
>TC93431 similar to GP|13605811|gb|AAK32891.1 AT5g36940/MLF18_60
{Arabidopsis thaliana}, partial (12%)
Length = 382
Score = 129 bits (324), Expect = 3e-30
Identities = 65/114 (57%), Positives = 87/114 (76%)
Frame = +2
Query: 339 QPRILMAMARDGLLPPFFCDINKHTLVPVKGTIITGLAAAVLAFSMEVSDLAGMVSVGTL 398
+ R+ MAMARDGLLP FF DI++ T +P+K TI+TGL AAVLAF M+VS LAGMVSVGTL
Sbjct: 5 EARVFMAMARDGLLPTFFSDIHRRTQIPLKSTIVTGLFAAVLAFFMDVSQLAGMVSVGTL 184
Query: 399 LAFTMVAISVLILRYIPPNKVPVPPSLQDSIVEIKVEYEEENIGTSEVSKPLDV 452
LAFT VA+SVLI+RY+PP+++P+P SL S V+ + + ++I P+D+
Sbjct: 185 LAFTTVAVSVLIIRYVPPDEIPIPASLLTS-VDPLLRHSGDDIEEDRTVSPVDL 343
>AW585613 PIR|T48473|T48 amino acid transport-like protein - Arabidopsis
thaliana, partial (34%)
Length = 603
Score = 125 bits (313), Expect = 6e-29
Identities = 70/200 (35%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Frame = +2
Query: 90 ELACRCPSAGSAYHYSYICLGEGVAWLIGWALLLEYTIGSAAVARGITPNLAPLFGGLDN 149
+ A P AG A+ Y I GE A+ G L+++Y + +AAV+R T L FG +
Sbjct: 5 QFAVHLPVAGGAFSYIRITFGEFPAFFTGANLVMDYVMSNAAVSRSFTAYLGTAFGISTS 184
Query: 150 LPFFLSRQHIPGIDIVVDPCAAILVLLVTGLLCLGIKESTVVQGIVTSVNVCALLFVIVA 209
F+ G + +DP A ++VL++T ++C +ES+ V I+T+ ++ + FVIV
Sbjct: 185 KWRFVVSGLPKGFN-EIDPVAVLVVLVITVIICCSTRESSKVNMIMTAFHIAFIFFVIVM 361
Query: 210 GGYMGFK---SGWVGYELPTGYFPFGVDGMLAGSATVFFAYVGFDAVASTAEEVKNPQRD 266
G G S E P+G+FPFG G+ G+A V+ +Y+G+DAV++ AEEV+NP +D
Sbjct: 362 GFIKGDSKNLSSPANPEHPSGFFPFGAAGVFNGAAMVYLSYIGYDAVSTMAEEVENPVKD 541
Query: 267 LPLGIGASLFLCCGMYMLVS 286
+P+G+ S+ + +Y L++
Sbjct: 542 IPVGVSGSVAIVTVLYCLMA 601
>AW736107 similar to GP|13605811|gb| AT5g36940/MLF18_60 {Arabidopsis
thaliana}, partial (9%)
Length = 578
Score = 110 bits (276), Expect = 1e-24
Identities = 64/177 (36%), Positives = 99/177 (55%), Gaps = 14/177 (7%)
Frame = +3
Query: 382 FSMEVSDLAGM-VSVGTLLAFTMVAISVLILRYIPPNKVPVPPSLQDSIVEIKVEYEEEN 440
FS+ V GM V V TLLAFT VA+SVLI+RY+PP+++P+P SL S+ + + + ++
Sbjct: 30 FSIVVYITLGMQVGVLTLLAFTTVAVSVLIIRYVPPDEIPIPASLLTSVDPL-LRHSGDD 206
Query: 441 IGTSEVSKPLDVTR-----------DFSIDYPLISKHRSKGNH--LNRRRVVGWTIAIIC 487
I P+D+ D +++PLI K +K H RR++ WTIA++C
Sbjct: 207 IEEDRTVSPVDLASYSDNSHLHDKSDVLLEHPLIIKEVTKEQHNEKTRRKLAAWTIALLC 386
Query: 488 LGAFVLTYAASCLTFLSSVRFALCGVGGTLLVSGFVFLTCMDQDDARHDFGHSGGMS 544
+G +++ +AS +R L G G + + + L C+ QDD RH FGHS G +
Sbjct: 387 IGILIVSGSASAERCPRILRVTLFGAGVVIFLCSIIVLACIKQDDTRHTFGHSRGFA 557
>CA920845 weakly similar to GP|10178213|dbj cationic amino acid
transporter-like protein {Arabidopsis thaliana}, partial
(14%)
Length = 697
Score = 108 bits (271), Expect = 4e-24
Identities = 52/55 (94%), Positives = 52/55 (94%)
Frame = -1
Query: 488 LGAFVLTYAASCLTFLSSVRFALCGVGGTLLVSGFVFLTCMDQDDARHDFGHSGG 542
L VLTYAASCLTFLSSVRFALCGVGGTLLVSGFVFLTCMDQDDARHDFGHSGG
Sbjct: 652 LRGVVLTYAASCLTFLSSVRFALCGVGGTLLVSGFVFLTCMDQDDARHDFGHSGG 488
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/38 (65%), Positives = 26/38 (67%)
Frame = -2
Query: 473 LNRRRVVGWTIAIICLGAFVLTYAASCLTFLSSVRFAL 510
LNRRRVVGWTIAIICLGA L+ LS V FAL
Sbjct: 696 LNRRRVVGWTIAIICLGA--LSSHMQLHV*LSLVLFAL 589
>AJ502603 weakly similar to GP|2116759|dbj| YfnA {Bacillus subtilis}, partial
(16%)
Length = 450
Score = 73.9 bits (180), Expect = 2e-13
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = +1
Query: 34 KELSVYHLIAIGVGSTIGAGVYVLVGTVAREHSGPALAISFLIAGLAAGLSAFCYAELAC 93
+ LS + LI IG+G IG G+ V+ G A +GPA+ ISF+I+G+AA +A Y+EL+
Sbjct: 220 RTLSAFDLIMIGLGGIIGTGILVITGQAAATKAGPAVVISFIISGIAASFAALSYSELSS 399
Query: 94 RCPSAGSAYHYSYICLG 110
P +GSAY + Y LG
Sbjct: 400 MIPISGSAYTFVYATLG 450
>TC91985 similar to PIR|A86307|A86307 amino acid transporter homolog
[imported] - Arabidopsis thaliana, partial (29%)
Length = 661
Score = 56.6 bits (135), Expect = 3e-08
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +1
Query: 36 LSVYHLIAIGVGSTIGAGVYVLVGTVAREHSGPALAISFLIAGLAAGLSAFCYAELACRC 95
L+ + L + G+ +G+G++V+ G AR +GP++ +S+ +G +A LSA YAE A
Sbjct: 295 LTWWDLTWLAFGAVVGSGIFVVTGQEARFDAGPSIILSYAASGFSALLSALIYAEFAVEV 474
Query: 96 PSAGSAYHYSYICLGE 111
P AG ++ + I LG+
Sbjct: 475 PVAGGSFSFLRIELGD 522
>TC93809 similar to PIR|H86428|H86428 hypothetical protein AAF19744.1
[imported] - Arabidopsis thaliana, partial (25%)
Length = 868
Score = 36.6 bits (83), Expect = 0.027
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +2
Query: 244 FFAYVGFDAVASTAEEVKNPQRDLPLGIGASLFLCCGMYMLVSVVVVGLVPYYAIDPDTP 303
F A G A ++ + +++ QR +P+G ++ MY L+SV++ G V D
Sbjct: 173 FPAVTGIMAGSNRSSSLRDTQRSIPVGTLSATLSTSFMY-LISVILFGAVA----TRDKL 337
Query: 304 ISSAFSDHGMQWAA-YIINAGACTALISALMGGILPQPRILMAMARDGLLP 353
++ + W +I G + + A + + PR+L A+A D +LP
Sbjct: 338 LTDRLLTATIAWPLPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILP 490
>BE942281 similar to GP|8567793|gb| amino acid transporter putative
{Arabidopsis thaliana}, partial (25%)
Length = 587
Score = 28.5 bits (62), Expect = 7.3
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 389 LAGMVSVGTLLAFTMVAISVLILRYI 414
L +VS+GTL F MVA +V+ RY+
Sbjct: 16 LLDLVSIGTLFVFYMVANAVVYRRYV 93
>TC87791 similar to GP|3659909|gb|AAC61600.1| histidyl-tRNA synthetase
{Arabidopsis thaliana}, partial (83%)
Length = 1799
Score = 28.1 bits (61), Expect = 9.5
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +3
Query: 161 GIDIVVDPCAAILVLLVTGLLCLGIKESTVVQGIVTSVNVCALLFVIV 208
G +++ A+L+ L L L +KES+ + +V + +C+ L V++
Sbjct: 1038 GFNLMHQLFVALLITLALSLRVLTVKESSELSVVVVDMIICSQLLVLM 1181
>TC77887 similar to GP|21594695|gb|AAM66034.1 unknown {Arabidopsis
thaliana}, partial (62%)
Length = 1209
Score = 28.1 bits (61), Expect = 9.5
Identities = 27/82 (32%), Positives = 36/82 (42%), Gaps = 3/82 (3%)
Frame = +3
Query: 275 LFLCCGMYMLVSVVVVGLVPYYAIDPDTPISSAFSDHGMQW---AAYIINAGACTALISA 331
LF C VS +V L Y I IS G+ W + Y+ + CT IS
Sbjct: 90 LF*CFFPLKFVSQSIVSLS--YGIKQSG*ISKWLLGGGVPWRLFSKYLPLSLLCT--IS* 257
Query: 332 LMGGILPQPRILMAMARDGLLP 353
+M LP +L+ RDG+LP
Sbjct: 258 IMSAFLPNSTMLV*EMRDGMLP 323
>TC78381 similar to GP|14335166|gb|AAK59863.1 AT3g25860/MPE11_1 {Arabidopsis
thaliana}, partial (80%)
Length = 1830
Score = 28.1 bits (61), Expect = 9.5
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -1
Query: 230 PFGVDGM-LAGSATVFFAYVGFDAVASTAEEVKNPQRDLPLGIGASLFLCCGMYMLVSVV 288
PFG G+ +A AT+ F V A AST+ V P +P S C + V
Sbjct: 813 PFGATGVGVATGATLLFTGV-IPAAASTSAGVILPNGPVPFTEAMSTLCCFASFFA*GVA 637
Query: 289 VVGLVP 294
V+ L P
Sbjct: 636 VIFLGP 619
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.326 0.143 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,486,180
Number of Sequences: 36976
Number of extensions: 298007
Number of successful extensions: 1922
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of query: 571
length of database: 9,014,727
effective HSP length: 101
effective length of query: 470
effective length of database: 5,280,151
effective search space: 2481670970
effective search space used: 2481670970
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC137986.3