TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137825.4 - phase: 0 
         (161 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC88765 weakly similar to GP|7630247|dbj|BAA94780.1 Similar to P...   261  1e-70
BE323872                                                              201  1e-52
TC85686 weakly similar to GP|7630247|dbj|BAA94780.1 Similar to P...   141  1e-34
CA917564                                                               29  0.73
TC88177 homologue to GP|10281004|dbj|BAB13742. pseudo-response r...    29  0.95
TC82880 similar to GP|9858483|gb|AAG01054.1| resistance protein ...    28  2.1
TC84601 similar to GP|17064920|gb|AAL32614.1 Mei2-like protein {...    27  3.6
TC77443 similar to GP|9758634|dbj|BAB09296.1 RNA-binding protein...    27  3.6
TC76896 homologue to SP|P35100|CLPA_PEA ATP-dependent clp protea...    27  3.6
TC77889 homologue to GP|13605515|gb|AAK32751.1 At1g30120/T2H7_8 ...    27  4.7
BQ752368 similar to PIR|T38215|T38 probable secretory pathway GD...    26  6.1
AW697258 similar to PIR|F96831|F96 hypothetical protein F18B13.1...    26  6.1
TC79524 similar to GP|9759289|dbj|BAB09754.1 contains similarity...    26  8.0
TC78468 similar to GP|21594872|gb|AAM66051.1 unknown {Arabidopsi...    26  8.0
TC88355 similar to GP|21554234|gb|AAM63309.1 sulfate adenylyltra...    26  8.0

>TC88765 weakly similar to GP|7630247|dbj|BAA94780.1 Similar to Populus
           balsamifera subsp. trichocarpa X Populus deltoides
           vegetative storage protein., partial (56%)
          Length = 1125

 Score =  261 bits (666), Expect = 1e-70
 Identities = 125/148 (84%), Positives = 140/148 (94%)
 Frame = +2

Query: 1   MEFLLGVLVMIVLLGNSIYAYGAINQLSWREISNINNEGPSIGIVVPNAYELNPLLHSSS 60
           MEFL  V++++VLLG+SI AYGAI+Q+SWREISNINN+GP IGIVVPN +ELNPLL SSS
Sbjct: 26  MEFL--VVLVMVLLGSSIKAYGAISQISWREISNINNKGPYIGIVVPNDFELNPLLQSSS 199

Query: 61  FVPHNKFPYFDFAGRHFRIGELEKKKVIVVMSGEGMLNAGLATQLLLTLFNIEGVLHYGI 120
           FVPHNKFPYFDFAGRHFRIGELEKKKVIVVM+G  MLNAGLATQLLLTLFN++GVLHYGI
Sbjct: 200 FVPHNKFPYFDFAGRHFRIGELEKKKVIVVMTGLSMLNAGLATQLLLTLFNVKGVLHYGI 379

Query: 121 AGNLNSRFQIGDVTIPKYWAHTGLWHWQ 148
           AGN+NS+FQIGDVTIP+YWAHTGLWHWQ
Sbjct: 380 AGNVNSKFQIGDVTIPQYWAHTGLWHWQ 463


>BE323872 
          Length = 352

 Score =  201 bits (511), Expect = 1e-52
 Identities = 99/99 (100%), Positives = 99/99 (100%)
 Frame = +2

Query: 1   MEFLLGVLVMIVLLGNSIYAYGAINQLSWREISNINNEGPSIGIVVPNAYELNPLLHSSS 60
           MEFLLGVLVMIVLLGNSIYAYGAINQLSWREISNINNEGPSIGIVVPNAYELNPLLHSSS
Sbjct: 56  MEFLLGVLVMIVLLGNSIYAYGAINQLSWREISNINNEGPSIGIVVPNAYELNPLLHSSS 235

Query: 61  FVPHNKFPYFDFAGRHFRIGELEKKKVIVVMSGEGMLNA 99
           FVPHNKFPYFDFAGRHFRIGELEKKKVIVVMSGEGMLNA
Sbjct: 236 FVPHNKFPYFDFAGRHFRIGELEKKKVIVVMSGEGMLNA 352


>TC85686 weakly similar to GP|7630247|dbj|BAA94780.1 Similar to Populus
           balsamifera subsp. trichocarpa X Populus deltoides
           vegetative storage protein., partial (71%)
          Length = 1408

 Score =  141 bits (356), Expect = 1e-34
 Identities = 62/118 (52%), Positives = 84/118 (70%)
 Frame = +2

Query: 31  EISNINNEGPSIGIVVPNAYELNPLLHSSSFVPHNKFPYFDFAGRHFRIGELEKKKVIVV 90
           +I+ IN EGP +G+++PN++ELNPLL +  + P +     DFAGR FR G + +K VI+V
Sbjct: 164 KIAKINEEGPYLGLIIPNSFELNPLLQNPGYTPSDSI--IDFAGRRFRFGSIGEKPVILV 337

Query: 91  MSGEGMLNAGLATQLLLTLFNIEGVLHYGIAGNLNSRFQIGDVTIPKYWAHTGLWHWQ 148
           M+G  ++NA + TQLLL+ F ++GV+HYGIAGN N    IGDV IP YWAH  LW WQ
Sbjct: 338 MTGLSVINAAITTQLLLSFFKVDGVVHYGIAGNANPSLHIGDVAIPHYWAHLALWSWQ 511


>CA917564 
          Length = 656

 Score = 29.3 bits (64), Expect = 0.73
 Identities = 17/42 (40%), Positives = 24/42 (56%), Gaps = 2/42 (4%)
 Frame = -2

Query: 58  SSSFV--PHNKFPYFDFAGRHFRIGELEKKKVIVVMSGEGML 97
           S SF+  P N   Y  F+GR  R+ E+ ++K I V+  EG L
Sbjct: 265 SCSFIVEPENSILYAKFSGRSTRLSEM*EEKYIQVVVMEGSL 140


>TC88177 homologue to GP|10281004|dbj|BAB13742. pseudo-response regulator 7
           {Arabidopsis thaliana}, partial (4%)
          Length = 1310

 Score = 28.9 bits (63), Expect = 0.95
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 46  VPNAYELNPLLHSSSFVPHNKFPYFDF 72
           +PN Y +N    ++S +PH+ FP+  F
Sbjct: 654 IPNVYSINCTNSNASQLPHHDFPHLSF 574


>TC82880 similar to GP|9858483|gb|AAG01054.1| resistance protein MG55
           {Glycine max}, partial (46%)
          Length = 1238

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 130 IGDVTIPKYWAHTGLWHWQVHTSCFNY 156
           I D  I K+W +  +W  ++ TSCF++
Sbjct: 637 IFDSEIKKHWIYISMWI*RIITSCFSF 717


>TC84601 similar to GP|17064920|gb|AAL32614.1 Mei2-like protein {Arabidopsis
           thaliana}, partial (10%)
          Length = 853

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 11/48 (22%)
 Frame = +1

Query: 50  YELNPLL-HSSSFVPHNKFPYFD----------FAGRHFRIGELEKKK 86
           Y   P+  H   FVPHN FP+F           F GR+  I   +  K
Sbjct: 379 YAAEPITPHCVDFVPHNMFPHFGLNVHNQRGMVFPGRNHMINSFDTYK 522


>TC77443 similar to GP|9758634|dbj|BAB09296.1 RNA-binding protein-like
           {Arabidopsis thaliana}, partial (80%)
          Length = 1332

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 19/72 (26%), Positives = 31/72 (42%), Gaps = 9/72 (12%)
 Frame = +3

Query: 13  LLGNSIYAYGAINQLSWREISNINNEGPSIGIVVPNAYELNPLLHSSSF---------VP 63
           L    +++ G ++   W  +S   +E PS+    P    L+P   SS           +P
Sbjct: 351 LAAGGMFSKGGLDPNGW--VSRFQSEMPSLIQSSPTPSWLSPQGSSSGLLVKKTIRVDIP 524

Query: 64  HNKFPYFDFAGR 75
            + FP F+F GR
Sbjct: 525 VDSFPNFNFVGR 560


>TC76896 homologue to SP|P35100|CLPA_PEA ATP-dependent clp protease
           ATP-binding subunit clpA homolog  chloroplast precursor.
           [Garden pea], partial (35%)
          Length = 1348

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 16/46 (34%), Positives = 25/46 (53%)
 Frame = +2

Query: 99  AGLATQLLLTLFNIEGVLHYGIAGNLNSRFQIGDVTIPKYWAHTGL 144
           AGL+ +L+L L  + G L    A +  +    G ++ PK+W HT L
Sbjct: 95  AGLSAELVLDLRTLTGRLP---ASSFLALLVWGSLSWPKHWPHTTL 223


>TC77889 homologue to GP|13605515|gb|AAK32751.1 At1g30120/T2H7_8
           {Arabidopsis thaliana}, partial (28%)
          Length = 653

 Score = 26.6 bits (57), Expect = 4.7
 Identities = 13/29 (44%), Positives = 18/29 (61%), Gaps = 1/29 (3%)
 Frame = -3

Query: 119 GIAGNLNSRF-QIGDVTIPKYWAHTGLWH 146
           GIA  L S+F Q+G ++IP  + H G  H
Sbjct: 342 GIAAQLQSQFEQVGPLSIPPMFRHMGSAH 256


>BQ752368 similar to PIR|T38215|T38 probable secretory pathway GDP
           dissociation inhibitor - fission yeast
           (Schizosaccharomyces pombe), partial (44%)
          Length = 811

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 76  HFRIGELEKKKVIVVMSGEGMLNAGLATQ 104
           + R+G+ E ++V VV SG+G+L     TQ
Sbjct: 679 NLRLGDNELRRVAVVGSGQGVLQNANGTQ 593


>AW697258 similar to PIR|F96831|F96 hypothetical protein F18B13.11 [imported]
           - Arabidopsis thaliana, partial (2%)
          Length = 651

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 55  LLHSSSFVPHNKFPYFDFAGRHFRIGELEKKKVIVVM 91
           +LHS  F P+ +FP+    G +FRI  L   K  VV+
Sbjct: 275 VLHSEVF-PYRRFPFHMLMGLYFRIR*LHGIKTGVVL 168


>TC79524 similar to GP|9759289|dbj|BAB09754.1 contains similarity to unknown
           protein~gb|AAF56975.1~gene_id:MFG13.14 {Arabidopsis
           thaliana}, partial (25%)
          Length = 744

 Score = 25.8 bits (55), Expect = 8.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 136 PKYWAHTGLWHWQVHTSCFNYLD 158
           PK+  H G  HWQ+H    N ++
Sbjct: 575 PKFQRHEGDHHWQIHLPPSNSIE 507


>TC78468 similar to GP|21594872|gb|AAM66051.1 unknown {Arabidopsis
           thaliana}, partial (78%)
          Length = 1249

 Score = 25.8 bits (55), Expect = 8.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 136 PKYWAHTGLWHWQV 149
           P+YW H   WHW++
Sbjct: 323 PRYWTHR--WHWKI 358


>TC88355 similar to GP|21554234|gb|AAM63309.1 sulfate adenylyltransferase
           {Arabidopsis thaliana}, partial (56%)
          Length = 1029

 Score = 25.8 bits (55), Expect = 8.0
 Identities = 11/26 (42%), Positives = 13/26 (49%)
 Frame = -3

Query: 128 FQIGDVTIPKYWAHTGLWHWQVHTSC 153
           F I D   P  WAH  +W W + T C
Sbjct: 766 FIIIDKNFPSTWAHKSIW-WILSTFC 692


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.324    0.142    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,840,694
Number of Sequences: 36976
Number of extensions: 82551
Number of successful extensions: 612
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of query: 161
length of database: 9,014,727
effective HSP length: 88
effective length of query: 73
effective length of database: 5,760,839
effective search space: 420541247
effective search space used: 420541247
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 54 (25.4 bits)