BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137822.5 - phase: 0
(203 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC93732 homologue to OMNI|NT01MC2635 Integral membrane protein o... 288 8e-79
AW584704 similar to SP|P05790|FBOH Fibroin heavy chain precursor... 249 7e-67
AJ499309 weakly similar to GP|7670832|gb|A dicyanin {Lycopersico... 184 2e-47
TC80221 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-... 124 2e-29
TC88539 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-... 122 7e-29
TC87415 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-... 113 6e-26
TC91082 similar to PIR|T01852|T01852 probable blue copper-bindin... 103 3e-23
TC79513 weakly similar to GP|9885806|gb|AAG01535.1| stellacyanin... 93 6e-20
TC87086 similar to SP|Q41001|BCP_PEA Blue copper protein precurs... 88 3e-18
TC86160 weakly similar to PIR|T01605|T01605 phytocyanin At2g4479... 87 4e-18
TC86161 weakly similar to PIR|T01605|T01605 phytocyanin At2g4479... 87 6e-18
AL384140 weakly similar to GP|2094888|pdb|2 Cucumber Basic Prote... 85 2e-17
TC77949 weakly similar to GP|11762218|gb|AAG40387.1 AT4g27520 {A... 84 3e-17
TC86144 weakly similar to GP|10727325|gb|AAF50995.2 CG15635 gene... 84 4e-17
TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroele... 82 1e-16
TC78623 similar to GP|3860333|emb|CAA10134.1 basic blue copper p... 80 7e-16
BI311704 weakly similar to PIR|T04605|T046 hypothetical protein ... 77 5e-15
TC89690 weakly similar to PIR|G84643|G84643 similar to early nod... 77 6e-15
BF633206 similar to GP|21553614|gb| blue copper protein putativ... 75 1e-14
AL372453 weakly similar to SP|P42849|UMEC_ Umecyanin (UMC). [Hor... 75 2e-14
>TC93732 homologue to OMNI|NT01MC2635 Integral membrane protein of unknown
function {Magnetococcus sp. MC-1}, partial (2%)
Length = 443
Score = 288 bits (738), Expect = 8e-79
Identities = 140/147 (95%), Positives = 143/147 (97%)
Frame = +3
Query: 11 ILSNKIKQRKSNTSTSTMALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTW 70
+ N+IKQRKSNTSTS MALSRALFLFA IA+IFSTMAVAKDFVVGDEKGWTTLFDYQTW
Sbjct: 3 VRGNQIKQRKSNTSTSYMALSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTW 182
Query: 71 TANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWY 130
TANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWY
Sbjct: 183 TANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWY 362
Query: 131 ISSVTDHCENGQKLFITVQPKQDGWSP 157
ISSVTDHCENGQKLFITVQPKQDGWSP
Sbjct: 363 ISSVTDHCENGQKLFITVQPKQDGWSP 443
>AW584704 similar to SP|P05790|FBOH Fibroin heavy chain precursor (Fib-H)
(H-fibroin). [Silk moth] {Bombyx mori}, partial (0%)
Length = 679
Score = 249 bits (635), Expect = 7e-67
Identities = 126/166 (75%), Positives = 130/166 (77%), Gaps = 3/166 (1%)
Frame = +1
Query: 22 NTSTSTMALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDT 81
N S MALSR+LFLFA IATIFSTMAVAKDFVVGDE GWT DYQ W ANKVFRLGDT
Sbjct: 34 N*SKYIMALSRSLFLFALIATIFSTMAVAKDFVVGDESGWTLGVDYQAWAANKVFRLGDT 213
Query: 82 LTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENG 141
LTF YV KDNVVRVNGSDF+SCSVP APVLTSG DKI +TTYGRRWYIS V +HCENG
Sbjct: 214 LTFKYVAWKDNVVRVNGSDFQSCSVPWAAPVLTSGHDKIALTTYGRRWYISGVANHCENG 393
Query: 142 QKLFITVQPKQDGWSPV---PSPSPSPSLDLVTPEAPPSNAPWPAS 184
QKLFI V PKQDGW P PS SPSPS APPSNAPW AS
Sbjct: 394 QKLFINVLPKQDGWYPAPSSPSASPSPSPVPAPEAAPPSNAPWAAS 531
Score = 27.7 bits (60), Expect = 3.2
Identities = 10/17 (58%), Positives = 13/17 (75%)
Frame = +3
Query: 147 TVQPKQDGWSPVPSPSP 163
+VQ + WSPVPSP+P
Sbjct: 627 SVQASEINWSPVPSPTP 677
>AJ499309 weakly similar to GP|7670832|gb|A dicyanin {Lycopersicon
esculentum}, partial (12%)
Length = 342
Score = 184 bits (468), Expect = 2e-47
Identities = 89/112 (79%), Positives = 97/112 (86%)
Frame = -3
Query: 19 RKSNTSTSTMALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRL 78
RK N S++ MALSR LFLFA IATIFSTMAVAKDFVVGDE+GW DYQ W ANKVFR+
Sbjct: 337 RKVN*SSNIMALSRVLFLFALIATIFSTMAVAKDFVVGDERGWKLGVDYQYWAANKVFRV 158
Query: 79 GDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWY 130
GDTLTFNYVGGKDNVVRVNGSDF+SCS+P APVLTSG D I++TTYGRRWY
Sbjct: 157 GDTLTFNYVGGKDNVVRVNGSDFQSCSIPWRAPVLTSGHDTILLTTYGRRWY 2
>TC80221 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-binding
protein-like {Arabidopsis thaliana}, partial (40%)
Length = 813
Score = 124 bits (312), Expect = 2e-29
Identities = 65/141 (46%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
Frame = +1
Query: 25 TSTMALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTF 84
T+ MAL+R L A + S++A+A D +VGD+KGWT F+Y WT +KVFR+GD L F
Sbjct: 58 TNQMALNRVAIL-AISMVLLSSVAMAADHIVGDDKGWTVDFNYTQWTQDKVFRVGDNLVF 234
Query: 85 NYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQ-K 143
NY K N+ +VNG+ FK C+ P L++G+D I + T GR+WY+ V DHC Q K
Sbjct: 235 NYDNTKHNIFKVNGTLFKDCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSAHQMK 414
Query: 144 LFITVQPKQDGWSPVPSPSPS 164
ITV + +P PSP PS
Sbjct: 415 FVITVLAE---GAPAPSPPPS 468
>TC88539 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-binding
protein-like {Arabidopsis thaliana}, partial (37%)
Length = 835
Score = 122 bits (307), Expect = 7e-29
Identities = 64/143 (44%), Positives = 88/143 (60%), Gaps = 2/143 (1%)
Frame = +3
Query: 28 MALSRALFLFAFIATIFSTMAVAK-DFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNY 86
MA SR + + + + S++A+A D +VGD+KGWT FDY W +KVFR+GD L FNY
Sbjct: 105 MASSRVVLILSISMVLLSSVAIAATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNY 284
Query: 87 VGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQ-KLF 145
+ NV +VNG+ F+SC+ P L++G+D I + T GR+WY+ V DHC Q KL
Sbjct: 285 DPARHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLV 464
Query: 146 ITVQPKQDGWSPVPSPSPSPSLD 168
ITV + P+PSP PS D
Sbjct: 465 ITVLAE-----GAPAPSPPPSSD 518
>TC87415 weakly similar to GP|9294157|dbj|BAB02059.1 blue copper-binding
protein-like {Arabidopsis thaliana}, partial (31%)
Length = 710
Score = 113 bits (282), Expect = 6e-26
Identities = 58/137 (42%), Positives = 85/137 (61%)
Frame = +1
Query: 28 MALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYV 87
M SRA++L A + S++A+A D VVGDEKGWT F+Y W +KVFR+GD L FNY
Sbjct: 67 MTYSRAIYL-AISMVLLSSVAMAADHVVGDEKGWTVDFNYTQWAQDKVFRVGDNLVFNYD 243
Query: 88 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 147
K NV +V+G F+SC+ P L++G+D I + T GR+WY+ +HC +++ +
Sbjct: 244 NTKHNVFKVDGKLFQSCTFPSENEALSTGKDVIQLKTEGRKWYVCGKANHCA-ARQMKLV 420
Query: 148 VQPKQDGWSPVPSPSPS 164
+ ++G PSPS S
Sbjct: 421 INVLEEG---APSPSSS 462
>TC91082 similar to PIR|T01852|T01852 probable blue copper-binding protein
F9D12.16 - Arabidopsis thaliana, partial (55%)
Length = 684
Score = 103 bits (258), Expect = 3e-23
Identities = 58/154 (37%), Positives = 81/154 (51%), Gaps = 4/154 (2%)
Frame = +2
Query: 47 MAVAKDFVVGDEKGWTTL--FDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSC 104
++ A + VGD GWTTL DY+ W A K F+LGDT+ F Y NV+RV + +KSC
Sbjct: 11 ISYAAVYKVGDSAGWTTLGNIDYKKWAATKNFQLGDTIIFEYSAKFHNVMRVTHAMYKSC 190
Query: 105 SVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPS 164
+ T+G D I IT +G ++ V HC+ GQK+ I V SP PS SPS
Sbjct: 191 NASSPIATFTTGNDTIKITNHGHHFFFCGVPGHCQAGQKVDINVLKVSVAASPAPSSSPS 370
Query: 165 PSLDLVTPEAPPSN--APWPASSVPRRSLLPKKL 196
P SN AP P+++ P++ + K +
Sbjct: 371 ALASPAEATVPASNVPAPSPSNAAPQKFIALKMM 472
>TC79513 weakly similar to GP|9885806|gb|AAG01535.1| stellacyanin-like
protein CASLP1 precursor {Capsicum annuum}, partial
(33%)
Length = 1093
Score = 93.2 bits (230), Expect = 6e-20
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Frame = +3
Query: 23 TSTSTMALSRALFLFAFIAT---IFSTMAVAKDFVVGDEKGWTTLFD----YQTWTANKV 75
T+ +TMA + + +F +A +F VVGD GWT + Y W +NK
Sbjct: 378 TTQTTMAKNFNVLVFVLLAVAANLFHGSFAQTRHVVGDTTGWTIPTNGASFYTNWASNKT 557
Query: 76 FRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVT 135
F +GDTL FNY G+ +V +V + + SC+ T LT+ + + G++ +I +V
Sbjct: 558 FTVGDTLVFNYASGQHDVAKVTKTAYDSCNGANTLFTLTNSPATVTLNETGQQNFICAVP 737
Query: 136 DHCENGQKLFITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASS-VPRRSLLP 193
HC GQKL I V + SPV +P+PS S P+A P+ P PA S P ++ P
Sbjct: 738 GHCSAGQKLSINV--VKASASPVSAPTPSAS----PPKATPAPTPVPAKSPAPTKAATP 896
Score = 28.9 bits (63), Expect = 1.4
Identities = 14/38 (36%), Positives = 20/38 (51%), Gaps = 4/38 (10%)
Frame = +3
Query: 53 FVVGDEKGWTTLFD----YQTWTANKVFRLGDTLTFNY 86
+ VGD GW + Y T + K F++GD L FN+
Sbjct: 963 YTVGDTIGWIIPSNGTAAYTTXASGKSFKVGDILVFNF 1076
>TC87086 similar to SP|Q41001|BCP_PEA Blue copper protein precursor. [Garden
pea] {Pisum sativum}, partial (87%)
Length = 1219
Score = 87.8 bits (216), Expect = 3e-18
Identities = 50/139 (35%), Positives = 69/139 (48%)
Frame = +1
Query: 28 MALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYV 87
M S L L F+ + +A VGD+ GW DY TW ++K F +GD+L FNY
Sbjct: 433 MTFSNPLILGFFLVINVAVPTLATVHTVGDKSGWAIGSDYNTWASDKTFAVGDSLVFNY- 609
Query: 88 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 147
G V V SD+KSC+ + +SG I + G ++I +V HC G KL +
Sbjct: 610 GAGHTVDEVKESDYKSCTTGNSISTDSSGPTTIPLKKAGTHYFICAVPGHCTGGMKLSVK 789
Query: 148 VQPKQDGWSPVPSPSPSPS 166
V+ S PS +PSPS
Sbjct: 790 VKASSSA-SSAPSATPSPS 843
>TC86160 weakly similar to PIR|T01605|T01605 phytocyanin At2g44790
[imported] - Arabidopsis thaliana, partial (34%)
Length = 918
Score = 87.0 bits (214), Expect = 4e-18
Identities = 57/192 (29%), Positives = 82/192 (42%), Gaps = 7/192 (3%)
Frame = +3
Query: 3 IYTRIQSLILSNKIKQRKSNTSTST------MALSRALFLFAFIATIFSTMAVAKDFVVG 56
I T S IL N Q S T + + ++ ++ F+ + A A DF VG
Sbjct: 21 IGTSSNSNILRNIFLQTLSFLQTFSF*ELKFIGMNTSMIASFFVLLLAFPYAFATDFTVG 200
Query: 57 DEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSG 116
D GW DY W + K F++GD L F Y G V V+ SD+KSC+ G
Sbjct: 201 DANGWNLGVDYTKWASGKTFKVGDNLVFKY-GSSHQVDEVDESDYKSCTSSNAIKNYAGG 377
Query: 117 QDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSLD-LVTPEAP 175
K+ +T G+ ++I HC + + + V +P PS +P P+ TP
Sbjct: 378 NSKVPLTKAGKIYFICPTLGHCTSTGGMKLEVNVVAASTTPTPSGTPPPTKSPSTTPSTT 557
Query: 176 PSNAPWPASSVP 187
PS P S P
Sbjct: 558 PSTTPSTTPSAP 593
>TC86161 weakly similar to PIR|T01605|T01605 phytocyanin At2g44790
[imported] - Arabidopsis thaliana, partial (17%)
Length = 736
Score = 86.7 bits (213), Expect = 6e-18
Identities = 49/161 (30%), Positives = 73/161 (44%)
Frame = +1
Query: 28 MALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYV 87
+ +S ++ F+ + A A DF VGD GWT DY W + K F++GD L F Y
Sbjct: 94 IGMSTSMIASFFVLLLAFPYAFATDFTVGDANGWTQGVDYTKWASGKTFKVGDNLVFKY- 270
Query: 88 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 147
G V V+ S +KSCS T G K+ +T G+ ++I HC + + +
Sbjct: 271 GSFHQVNEVDESGYKSCSTSNTIKSYDDGDSKVPLTKAGKIYFICPTPGHCTSTGGMKLE 450
Query: 148 VQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVPR 188
V +P PS +P P+ T + PS S P+
Sbjct: 451 VNVVAASTTPTPSGTPPPTKSPSTTPSAPSETNSTTPSPPK 573
>AL384140 weakly similar to GP|2094888|pdb|2 Cucumber Basic Protein A Blue
Copper Protein, partial (92%)
Length = 441
Score = 84.7 bits (208), Expect = 2e-17
Identities = 47/127 (37%), Positives = 68/127 (53%)
Frame = +2
Query: 20 KSNTSTSTMALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLG 79
+ S++++ L L + F S M+ A++ +VGD KGW+ F Q W A K F+ G
Sbjct: 44 QGRVSSTSIILMSLLCMLVF----HSNMSFAEEHIVGDGKGWS--FGVQNWPAGKTFKAG 205
Query: 80 DTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCE 139
DTL FNY NVV VN S + SC P + V TSG D+I + G +++ HC
Sbjct: 206 DTLVFNYSPTSHNVVVVNKSGYDSCVAPKGSKVYTSGADRITLAK-GGNYFLCGFPGHCN 382
Query: 140 NGQKLFI 146
GQK+ +
Sbjct: 383 LGQKIAV 403
>TC77949 weakly similar to GP|11762218|gb|AAG40387.1 AT4g27520 {Arabidopsis
thaliana}, partial (34%)
Length = 1297
Score = 84.3 bits (207), Expect = 3e-17
Identities = 51/162 (31%), Positives = 78/162 (47%), Gaps = 10/162 (6%)
Frame = +3
Query: 36 LFAFIATIFSTMAVAKDFVVGDEKGWTT--LFDYQTWTANKVFRLGDTLTFNYVGGKDNV 93
LF + T+ + + A F VG + GWT +Y W F++ DT+ F Y G D+V
Sbjct: 138 LFFVLFTLVVSTSQAFKFFVGGKDGWTLNPSENYNQWAGRNRFQISDTIVFKYKKGSDSV 317
Query: 94 VRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKL-FITVQPKQ 152
+ V D++ C+ G+ + + G ++IS +CENGQKL + + P+
Sbjct: 318 LEVKKEDYEKCNKTNPIKKFEDGETEFTLDRAGPFYFISGKDQNCENGQKLTLVVISPRT 497
Query: 153 DGWSPVPS------PSPSPSLDLVTPE-APPSNAPWPASSVP 187
SP PS PSPSP+ +P +PPS P +S P
Sbjct: 498 PKSSPSPSAGGLSPPSPSPTTTTPSPSGSPPSPVAIPPASSP 623
>TC86144 weakly similar to GP|10727325|gb|AAF50995.2 CG15635 gene product
{Drosophila melanogaster}, partial (4%)
Length = 922
Score = 84.0 bits (206), Expect = 4e-17
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Frame = +3
Query: 15 KIKQRKSNTSTSTMALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFD---YQTWT 71
K K + + S + LF+ AF A I + A D VG GW+ Y W
Sbjct: 60 KHKPHNKHKNMSQLKNMSILFVVAFAAAILESTEAA-DHTVGGTTGWSVPSGASFYSDWA 236
Query: 72 ANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYI 131
A+ F+ D L FN+ GG V V+ +DF +C++ V+T+G ++ + G ++I
Sbjct: 237 ASNTFKQNDVLVFNFAGGH-TVAEVSKADFDNCNINQNGLVITTGPARVTLNRTGDFYFI 413
Query: 132 SSVTDHCENGQKLFITVQPKQDG-WSPVP----SPSPSPSLDLVTPEAPPSNAPWPASSV 186
++ HC +GQKL + V SP P P+ +P TP PP+N P+ S
Sbjct: 414 CTIQGHCSSGQKLSVKVSASTPSPPSPTPPTSTPPTSTPPTSGTTP-TPPTNGGTPSPSS 590
Query: 187 P 187
P
Sbjct: 591 P 593
>TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroelement pol
polyprotein {Oryza sativa} [Oryza sativa (japonica
cultivar-group)], partial (2%)
Length = 1235
Score = 82.4 bits (202), Expect = 1e-16
Identities = 57/182 (31%), Positives = 86/182 (46%), Gaps = 21/182 (11%)
Frame = +3
Query: 32 RALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFD-----YQTWTANKVFRLGDTLTFNY 86
+AL LF + + A +FVVG +KGW+ D Y W F++GD+L FNY
Sbjct: 90 QALVLFCLLVLLMHK-GDAYEFVVGGQKGWSAPSDPNANPYNQWAEKSRFQVGDSLVFNY 266
Query: 87 VGGKDNVVRVNG-SDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLF 145
G+D+V++V D+++C+ ++ + G I + G ++IS ++C +KL
Sbjct: 267 QSGQDSVIQVTSQQDYENCNTDASSEKSSDGHTVIKLIKSGPHYFISGNKNNCLQNEKLL 446
Query: 146 I-------------TVQPKQDGWSPVPSPSP--SPSLDLVTPEAPPSNAPWPASSVPRRS 190
+ T P S PSPSP S S D +TP PPS P SS P
Sbjct: 447 VIVLADRTNKNSNQTTSPPSPSPSVAPSPSPLSSHSSDALTPIPPPS--PLNGSSTPPSP 620
Query: 191 LL 192
+L
Sbjct: 621 VL 626
>TC78623 similar to GP|3860333|emb|CAA10134.1 basic blue copper protein
{Cicer arietinum}, partial (98%)
Length = 743
Score = 79.7 bits (195), Expect = 7e-16
Identities = 49/121 (40%), Positives = 63/121 (51%), Gaps = 2/121 (1%)
Frame = +3
Query: 28 MALSR--ALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFN 85
MAL R AL L + S +A A + VG GWT F+ W K FR GDTL FN
Sbjct: 33 MALGRGSALVLLVCFFVLNSELAHAATYTVGGPGGWT--FNTVGWPNGKRFRAGDTLVFN 206
Query: 86 YVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLF 145
Y NVV VN + SC P A V SG+D+I + G+ ++I + HCE+G K+
Sbjct: 207 YSPSAHNVVAVNKGGYDSCKTPRGAKVYRSGKDQIRLAR-GQNYFICNFVGHCESGMKIA 383
Query: 146 I 146
I
Sbjct: 384 I 386
>BI311704 weakly similar to PIR|T04605|T046 hypothetical protein F20O9.30 -
Arabidopsis thaliana, partial (11%)
Length = 504
Score = 77.0 bits (188), Expect = 5e-15
Identities = 43/135 (31%), Positives = 68/135 (49%), Gaps = 2/135 (1%)
Frame = +2
Query: 50 AKDFVVGDEKGWTT--LFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVP 107
AK+F VG + GW DY W FR+ DTL F YV G D+V+ V D+ SC+
Sbjct: 20 AKEFHVGGKDGWVVNPSEDYNQWARTHRFRVNDTLHFKYVKGNDSVLVVKKEDYDSCNTN 199
Query: 108 LTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSL 167
L +G K ++ G ++IS D+C++ +K+ + V + P+ +P++
Sbjct: 200 NPKQKLDNGNSKFKLSDSGFYYFISGNADNCKHDEKMIVQVMAVR--------PNVTPNV 355
Query: 168 DLVTPEAPPSNAPWP 182
V P PP++A P
Sbjct: 356 TAVPPSQPPASASPP 400
>TC89690 weakly similar to PIR|G84643|G84643 similar to early nodulins
[imported] - Arabidopsis thaliana, partial (56%)
Length = 732
Score = 76.6 bits (187), Expect = 6e-15
Identities = 47/147 (31%), Positives = 70/147 (46%), Gaps = 5/147 (3%)
Frame = +3
Query: 43 IFSTMAVAKDFVVGDEK-GW----TTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVN 97
+F AKD ++G + W + W ++ F++GD L Y GKD+V++V+
Sbjct: 45 LFGCAFAAKDILLGGKTDAWKVPSSESDSLNKWASSVRFQVGDHLILKYEAGKDSVLQVS 224
Query: 98 GSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGWSP 157
D+ SC++ G K+ G +YIS HCE GQKL + V + G P
Sbjct: 225 KEDYDSCNISKPIKHYNDGNTKVRFDHSGPYYYISGEKGHCEKGQKLTVVVMSLKGGSRP 404
Query: 158 VPSPSPSPSLDLVTPEAPPSNAPWPAS 184
+ + SPSPS V A + AP P S
Sbjct: 405 IVAFSPSPSPAEVEGPAASAVAPAPTS 485
>BF633206 similar to GP|21553614|gb| blue copper protein putative
{Arabidopsis thaliana}, partial (56%)
Length = 478
Score = 75.5 bits (184), Expect = 1e-14
Identities = 39/139 (28%), Positives = 65/139 (46%)
Frame = +2
Query: 28 MALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYV 87
M + + L +AT+ + +A VG +GW D+ +W++ + F++GD L F Y
Sbjct: 38 MGCKKMILLALLLATLITKEVLATQHNVGGSQGWDPSSDFDSWSSGQTFKVGDQLVFKYT 217
Query: 88 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 147
V + S +K C + L++G+D + + G R++ HC+ G K+ IT
Sbjct: 218 SMHSVVELSDESAYKKCDISTPLNSLSTGKDVVKLDKPGTRYFTCGTLGHCDQGMKVKIT 397
Query: 148 VQPKQDGWSPVPSPSPSPS 166
V S SPS S S
Sbjct: 398 VGNGNGSSSTASSPSSSSS 454
>AL372453 weakly similar to SP|P42849|UMEC_ Umecyanin (UMC). [Horseradish
Armoracia laphatifolia] {Armoracia rusticana}, partial
(27%)
Length = 518
Score = 75.1 bits (183), Expect = 2e-14
Identities = 43/140 (30%), Positives = 69/140 (48%), Gaps = 3/140 (2%)
Frame = +1
Query: 10 LILSNKIKQRKSNTSTSTMALSRALFLFAFIATIFSTMAVAKDFVVGDEKGWTTLFD--- 66
L+ K K R + + S + LF+ AF A I + A D VG GW+
Sbjct: 85 LVSKKKKKXRD*HKNMSQLKNMSILFVVAFAAAILESTEAA-DHTVGGTTGWSVPSGASF 261
Query: 67 YQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYG 126
Y W A+ F+ D L FN+ GG V V+ +DF +C++ V+T+G ++ + G
Sbjct: 262 YSDWAASNTFKQNDVLVFNFAGGH-TVAEVSKADFDNCNINQNGLVITTGPARVTLNRTG 438
Query: 127 RRWYISSVTDHCENGQKLFI 146
++I ++ HC +GQKL +
Sbjct: 439 DFYFICTIQGHCSSGQKLSV 498
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,612,379
Number of Sequences: 36976
Number of extensions: 103500
Number of successful extensions: 2231
Number of sequences better than 10.0: 205
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1968
length of query: 203
length of database: 9,014,727
effective HSP length: 91
effective length of query: 112
effective length of database: 5,649,911
effective search space: 632790032
effective search space used: 632790032
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Medicago: description of AC137822.5