BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137702.2 + phase: 0
(257 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG448236 similar to GP|21537370|gb putative prolyl 4-hydroxylase... 429 e-121
TC86651 similar to PIR|F84555|F84555 similar to prolyl 4-hydroxy... 356 4e-99
TC86903 similar to GP|21617881|gb|AAM66931.1 prolyl 4-hydroxylas... 231 2e-61
TC78028 similar to GP|22136524|gb|AAM91340.1 unknown protein {Ar... 208 2e-54
TC78029 similar to GP|21593296|gb|AAM65245.1 prolyl 4-hydroxylas... 204 2e-53
TC79830 similar to PIR|G84861|G84861 hypothetical protein At2g43... 182 1e-46
AJ388831 weakly similar to GP|10177121|dbj prolyl 4-hydroxylase ... 149 1e-36
BG447864 weakly similar to GP|10177121|db prolyl 4-hydroxylase ... 123 8e-29
TC83824 similar to GP|17381226|gb|AAL36425.1 unknown protein {Ar... 91 4e-19
BF518749 61 4e-10
BF521324 similar to GP|18086437|gb| AT3g28480/MFJ20_16 {Arabidop... 54 5e-08
BQ144147 44 5e-05
TC83541 30 1.2
TC80635 similar to GP|14165163|gb|AAK55409.1 2-on-2 hemoglobin {... 28 3.5
TC90622 weakly similar to PIR|C86366|C86366 protein F26F24.2 [im... 28 3.5
TC88244 homologue to GP|7385201|gb|AAF61730.1| beta-ketoacyl-ACP... 28 4.5
TC84014 similar to GP|21593296|gb|AAM65245.1 prolyl 4-hydroxylas... 27 5.9
TC83808 similar to PIR|T04231|T04231 hypothetical protein F14M19... 27 5.9
TC79793 weakly similar to GP|6630464|gb|AAF19552.1| F23N19.4 {Ar... 27 5.9
TC78237 similar to GP|17933299|gb|AAL48232.1 AT4g17800/dl4935c {... 27 7.7
>BG448236 similar to GP|21537370|gb putative prolyl 4-hydroxylase alpha
subunit {Arabidopsis thaliana}, partial (52%)
Length = 682
Score = 429 bits (1103), Expect(2) = e-121
Identities = 214/215 (99%), Positives = 214/215 (99%)
Frame = +3
Query: 3 KGKHTHPRSQVKKLSTLILLTLFMLTLVIIVLLALGILYLPNTTDDSLITDRRKIYESLA 62
KGKHTHPRSQVKKLSTLILLTLFMLTLVIIVLLALGILYLPNTTDDSLITDRRKIYESLA
Sbjct: 3 KGKHTHPRSQVKKLSTLILLTLFMLTLVIIVLLALGILYLPNTTDDSLITDRRKIYESLA 182
Query: 63 EKKEQWTEILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTS 122
EKKEQWTEILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTS
Sbjct: 183 EKKEQWTEILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTS 362
Query: 123 SGMFLKRGKDKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKN 182
SGMFLKRGKDKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKN
Sbjct: 363 SGMFLKRGKDKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKN 542
Query: 183 GGQRVATVLMYLSDVEEGGETVFPAAKANFSSVPW 217
GGQRVATVLMYLSDVEEGGETVFPAA ANFSSVPW
Sbjct: 543 GGQRVATVLMYLSDVEEGGETVFPAAXANFSSVPW 647
Score = 23.1 bits (48), Expect(2) = e-121
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 219 NDLSECARKG 228
NDLSECAR G
Sbjct: 652 NDLSECARXG 681
>TC86651 similar to PIR|F84555|F84555 similar to prolyl 4-hydroxylase alpha
subunit [imported] - Arabidopsis thaliana, partial (85%)
Length = 1329
Score = 356 bits (914), Expect = 4e-99
Identities = 172/266 (64%), Positives = 217/266 (80%), Gaps = 9/266 (3%)
Frame = +2
Query: 1 MAKGKHTHPRSQVKKLSTLILLTLFM-LTLVIIVLLALGILYLPNTTDD--------SLI 51
MAK +++ S+ ++ +LF+ T +I++LL GIL +P++ + S++
Sbjct: 119 MAKSRYSRLPSRKSSSPYTLIFSLFIAFTFLILILLVFGILSIPSSNQNLPKPNDLTSIV 298
Query: 52 TDRRKIYESLAEKKEQWTEILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKT 111
+ + K EQW E++SWEPRAFVYHNFL+KEECE+LI++AKP + KS+VVDS+T
Sbjct: 299 HNTVDRNDDEEGKGEQWVEVVSWEPRAFVYHNFLTKEECEYLIDIAKPSMHKSTVVDSET 478
Query: 112 GKSTESRVRTSSGMFLKRGKDKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHY 171
GKS +SRVRTSSG FL RG+DKI++NIE++IADFTFIPVE+GEGLQVLHY VG+KYEPHY
Sbjct: 479 GKSKDSRVRTSSGTFLARGRDKIVRNIEKKIADFTFIPVEHGEGLQVLHYEVGQKYEPHY 658
Query: 172 DYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECARKGLSL 231
DYFLDEFNTKNGGQR+ATVLMYL+DVEEGGETVFPAAK NFS+VPW+N+LS+C +KGLS+
Sbjct: 659 DYFLDEFNTKNGGQRIATVLMYLTDVEEGGETVFPAAKGNFSNVPWYNELSDCGKKGLSI 838
Query: 232 KPKMGDALLFWSMRPDATLDASSLHG 257
KPK GDALLFWSM+PDATLDASSLHG
Sbjct: 839 KPKRGDALLFWSMKPDATLDASSLHG 916
>TC86903 similar to GP|21617881|gb|AAM66931.1 prolyl 4-hydroxylase putative
{Arabidopsis thaliana}, partial (68%)
Length = 1310
Score = 231 bits (590), Expect = 2e-61
Identities = 114/186 (61%), Positives = 143/186 (76%)
Frame = +3
Query: 72 LSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGK 131
LSW PRAF+Y NFL+ EEC+HLI L+K L KS V D+++GKS +S VRTSSGMFL + +
Sbjct: 315 LSWSPRAFLYKNFLTDEECDHLIELSKDKLEKSMVADNESGKSIQSEVRTSSGMFLNKQQ 494
Query: 132 DKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVL 191
D+I+ IE RIA +TF+PVENGE +QVLHY GEKYEPH+D+F D+ N + GG RVATVL
Sbjct: 495 DEIVSGIEARIAAWTFLPVENGESMQVLHYMNGEKYEPHFDFFHDKANQRLGGHRVATVL 674
Query: 192 MYLSDVEEGGETVFPAAKANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDATLD 251
MYLS+VE+GGET+FP A+ S P SECA KG ++KP+ GDALLF+S+ DAT D
Sbjct: 675 MYLSNVEKGGETIFPHAEGKLSQ-PKDESWSECAHKGYAVKPRKGDALLFFSLHLDATTD 851
Query: 252 ASSLHG 257
+ SLHG
Sbjct: 852 SKSLHG 869
>TC78028 similar to GP|22136524|gb|AAM91340.1 unknown protein {Arabidopsis
thaliana}, partial (86%)
Length = 1217
Score = 208 bits (529), Expect = 2e-54
Identities = 103/189 (54%), Positives = 137/189 (71%), Gaps = 4/189 (2%)
Frame = +1
Query: 72 LSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGK 131
+SW+PRAFVY FL+ EC+HLI++AK L +S+V D+ +G+S S VRTSSGMF+ + K
Sbjct: 136 VSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGMFISKNK 315
Query: 132 DKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVL 191
D I+ IE +I+ +TF+P ENGE +QVL Y G+KY+PHYDYF D+ N GG RVATVL
Sbjct: 316 DAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIARGGHRVATVL 495
Query: 192 MYLSDVEEGGETVFPAAKANFSS----VPWWNDLSECARKGLSLKPKMGDALLFWSMRPD 247
MYL++V +GGETVFP A+ S DLSEC +KG+++KP+ GDALLF+S+ P+
Sbjct: 496 MYLTNVTKGGETVFPNAELQESPRHKLSETDEDLSECGKKGVAVKPRRGDALLFFSLHPN 675
Query: 248 ATLDASSLH 256
A D SLH
Sbjct: 676 AIPDTLSLH 702
>TC78029 similar to GP|21593296|gb|AAM65245.1 prolyl 4-hydroxylase alpha
subunit-like protein {Arabidopsis thaliana}, partial
(89%)
Length = 1126
Score = 204 bits (520), Expect = 2e-53
Identities = 103/187 (55%), Positives = 136/187 (72%), Gaps = 2/187 (1%)
Frame = +3
Query: 72 LSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGK 131
+SW PRAFVY FL+ EC+HLI+LAK L +S+V D+ +G S S VRTSSGMF+ + K
Sbjct: 228 ISWIPRAFVYQGFLTDLECDHLISLAKSELKRSAVADNLSGDSQLSDVRTSSGMFISKNK 407
Query: 132 DKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVL 191
D I+ IE RI+ +TF+P ENGE +QVL Y G+KY+PHYDYF D+ N GG R+ATVL
Sbjct: 408 DPIVSGIEDRISAWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIVQGGHRLATVL 587
Query: 192 MYLSDVEEGGETVFPAAK--ANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDAT 249
MYL++V +GGETVFP A+ +DLSECA+KG+++KP+ GDALLF+S+ +A
Sbjct: 588 MYLTNVTKGGETVFPEAEEPPRRRGSKKSSDLSECAKKGIAVKPRRGDALLFFSLDTNAI 767
Query: 250 LDASSLH 256
D +SLH
Sbjct: 768 PDTNSLH 788
>TC79830 similar to PIR|G84861|G84861 hypothetical protein At2g43080
[imported] - Arabidopsis thaliana, partial (87%)
Length = 1130
Score = 182 bits (462), Expect = 1e-46
Identities = 111/259 (42%), Positives = 149/259 (56%), Gaps = 22/259 (8%)
Frame = +1
Query: 21 LLTLFMLTLVIIVLLALGIL--------YLPNTTDDSLITDRRKIYESLAEKKEQWT--- 69
LLT + ++I L L + + TT SL+ + + +K+ Q
Sbjct: 127 LLTFVTIGMIIGALSQLAFIRRLELEEPFTTTTTTRSLLPRGYTYWNNNNDKEAQILRLG 306
Query: 70 ----EILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGM 125
E+LSW PR + HNFLS EEC++L +A P L S+VVD+ TGK +S VRTSSGM
Sbjct: 307 YVKPEVLSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVVDANTGKGIKSDVRTSSGM 486
Query: 126 FLKRGKDK--IIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNG 183
FL + K +I IE+RI+ ++ IP+ENGE +QVL Y + Y PH+DYF D FN K G
Sbjct: 487 FLSHEERKYPMIHAIEKRISVYSQIPIENGELMQVLRYEKNQYYRPHHDYFSDTFNLKRG 666
Query: 184 GQRVATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECA-----RKGLSLKPKMGDA 238
GQR+AT+LMYL D EGGET FP+A ++ EC+ KGL +KP G+A
Sbjct: 667 GQRIATMLMYLGDNVEGGETHFPSAGSD-----------ECSCGGKLTKGLCVKPVKGNA 813
Query: 239 LLFWSMRPDATLDASSLHG 257
+LFWSM D D S+HG
Sbjct: 814 VLFWSMGLDGQSDPDSVHG 870
>AJ388831 weakly similar to GP|10177121|dbj prolyl 4-hydroxylase alpha
subunit-like protein {Arabidopsis thaliana}, partial
(33%)
Length = 505
Score = 149 bits (376), Expect = 1e-36
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
Frame = +3
Query: 8 HPRSQVKKLSTLILLTLFMLTLVIIVLLALGILYL--PNTTDDSLITDRRKIYESLAEKK 65
H ++K S +I TLF+ V L L IL L P + IT + + K
Sbjct: 9 HSNVGLRKPSLIICWTLFLTLFVTFTFLILIILTLRIPKPNHLNSITHSNTLRNEDDDNK 188
Query: 66 EQWTEILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGM 125
+W +I+SWEPRAF+YHNFL+KEECEHLIN+AKP + KS+V+D +TG +S RTSSG
Sbjct: 189 -RWVQIISWEPRAFLYHNFLTKEECEHLINIAKPSMHKSAVIDEETGNGVDSSERTSSGA 365
Query: 126 FLKRGKDKIIQNIERRIADFTFIPVENGEGLQVL 159
FLKRG D+I++NIERRIADFTFIP E+GE L
Sbjct: 366 FLKRGSDRIVKNIERRIADFTFIPXEHGENFNGL 467
>BG447864 weakly similar to GP|10177121|db prolyl 4-hydroxylase alpha
subunit-like protein {Arabidopsis thaliana}, partial
(50%)
Length = 639
Score = 123 bits (308), Expect = 8e-29
Identities = 71/183 (38%), Positives = 102/183 (54%), Gaps = 37/183 (20%)
Frame = +3
Query: 1 MAKGKHTHPRSQVKKLSTLILLTLFM-LTLVIIVLLALGILYLPNTTDD-SLITDRRKIY 58
MAK +++ S+ ++ +LF+ T +I++LL GIL +P++ + D I
Sbjct: 90 MAKSRYSRLPSRKSSSPYTLIFSLFIAFTFLILILLVFGILSIPSSNQNLPKPNDLTSIV 269
Query: 59 ESLAE-----------------------------------KKEQWTEILSWEPRAFVYHN 83
+ + K EQW E++SWEP AFVYHN
Sbjct: 270 HNTVDR*CFCYNCFSI*FRVFFCCVDDFFFV*IRNDDEEGKGEQWVEVVSWEPXAFVYHN 449
Query: 84 FLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGKDKIIQNIERRIA 143
FL+KEECE+LI++ KP + KS+VVDS+TGKS +S VRT SG FL RG+D I +NI ++IA
Sbjct: 450 FLTKEECEYLIDIXKPSMHKSTVVDSETGKSKDSXVRTXSGTFLARGRDXIXRNIXKKIA 629
Query: 144 DFT 146
DFT
Sbjct: 630 DFT 638
>TC83824 similar to GP|17381226|gb|AAL36425.1 unknown protein {Arabidopsis
thaliana}, partial (43%)
Length = 680
Score = 90.9 bits (224), Expect = 4e-19
Identities = 47/106 (44%), Positives = 66/106 (61%)
Frame = +3
Query: 152 NGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVFPAAKAN 211
+GE +L Y VG++Y HYD F + QRVA+ L+YL+DVEEGGET+FP N
Sbjct: 3 HGEAFNILRYEVGQRYNSHYDAFNPDEYGPQKSQRVASFLLYLTDVEEGGETMFPF--EN 176
Query: 212 FSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDATLDASSLHG 257
++ +C GL +KP+ GD LLF+S+ P+ T+D +SLHG
Sbjct: 177 GLNMDGTYGYEDCV--GLRVKPRQGDGLLFYSLLPNGTIDQTSLHG 308
>BF518749
Length = 416
Score = 61.2 bits (147), Expect = 4e-10
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Frame = +1
Query: 19 LILLTLFMLTLVIIVLLALGILY---------LPNTTDDSLITDRRKIYESLAEKKEQWT 69
L+ +++ +LT ++ L +L L N ++ L R +Y S +
Sbjct: 4 LLQISMSLLTFLLFTFFTLSLLTTSFSDSRKELRNKNENVLKQLRNSVYYSNRIDPSRVV 183
Query: 70 EILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKR 129
+I SW+PR F+Y FLS +EC++LI+LA+ S + TS M
Sbjct: 184 QI-SWQPRVFLYKGFLSDKECDYLISLAQE--------KSSGNGGYSKKEETSLDM---- 324
Query: 130 GKDKIIQNIERRIADFTFIPVENGEGLQVLH 160
D I++ IE R++ +TF+ EN + LQV+H
Sbjct: 325 -DDDIVKRIEERLSVWTFLSKENSKPLQVMH 414
>BF521324 similar to GP|18086437|gb| AT3g28480/MFJ20_16 {Arabidopsis
thaliana}, partial (15%)
Length = 285
Score = 54.3 bits (129), Expect = 5e-08
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1
Query: 72 LSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKT 111
LSW PRAF+Y+NFL+ EEC+HLI L+K L KS D+++
Sbjct: 166 LSWSPRAFLYNNFLTDEECDHLIELSKDNLEKSMAADNES 285
>BQ144147
Length = 729
Score = 44.3 bits (103), Expect = 5e-05
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 146 TFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVF 205
T +P+ENG+ L + Y G + P+ +Y + N GG R TVLM +++ +G F
Sbjct: 92 TSLPIENGDNLHIWRYKHGHNHNPNDNYSTHKINIVQGGHRPPTVLMLITNETKGNRN*F 271
>TC83541
Length = 652
Score = 29.6 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (48%), Gaps = 3/67 (4%)
Frame = +2
Query: 2 AKGKHTHPRSQ---VKKLSTLILLTLFMLTLVIIVLLALGILYLPNTTDDSLITDRRKIY 58
A KH P Q +K L TLI++ +F LTL I+ L + + S ++ +
Sbjct: 77 ASEKHPSPSQQNPNMKPLCTLIIVVIFALTL--ILSLEVNVAKARTYPSSSNVSKMLSSF 250
Query: 59 ESLAEKK 65
+SL+ KK
Sbjct: 251 QSLSHKK 271
>TC80635 similar to GP|14165163|gb|AAK55409.1 2-on-2 hemoglobin {Arabidopsis
thaliana}, partial (87%)
Length = 663
Score = 28.1 bits (61), Expect = 3.5
Identities = 22/79 (27%), Positives = 34/79 (42%)
Frame = +2
Query: 59 ESLAEKKEQWTEILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESR 118
++L EK +W+ + + A N K + INL+ F + V D + +S
Sbjct: 14 QNLQEKASEWSGVETNHAFAIDDTNLFQKLGLQTFINLSTNFYNRVYVDDEEWFRS---- 181
Query: 119 VRTSSGMFLKRGKDKIIQN 137
+F K KDK IQN
Sbjct: 182 ------IFAKSDKDKAIQN 220
>TC90622 weakly similar to PIR|C86366|C86366 protein F26F24.2 [imported] -
Arabidopsis thaliana, partial (10%)
Length = 537
Score = 28.1 bits (61), Expect = 3.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 55 RKIYESLAEKKEQWTEILSWEPRAFVYHNFLSKEEC 90
+ + E + + K+QW +L W+ F+ K+EC
Sbjct: 290 KMVQEVIEQSKKQWMHLLQWDIIVLQEQLFM*KQEC 397
>TC88244 homologue to GP|7385201|gb|AAF61730.1| beta-ketoacyl-ACP synthetase
I {Glycine max}, partial (89%)
Length = 1768
Score = 27.7 bits (60), Expect = 4.5
Identities = 15/36 (41%), Positives = 22/36 (60%)
Frame = +3
Query: 16 LSTLILLTLFMLTLVIIVLLALGILYLPNTTDDSLI 51
L ++LT+ +LV +V L L L LPN+ DSL+
Sbjct: 258 LEMTLMLTMISFSLVRVVSLPLIDLMLPNSQLDSLV 365
>TC84014 similar to GP|21593296|gb|AAM65245.1 prolyl 4-hydroxylase alpha
subunit-like protein {Arabidopsis thaliana}, partial
(9%)
Length = 653
Score = 27.3 bits (59), Expect = 5.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 112 GKSTESRVRTSSGMFLKRGK 131
G+S S VRTSSGMF+ + K
Sbjct: 23 GESKLSEVRTSSGMFISKNK 82
>TC83808 similar to PIR|T04231|T04231 hypothetical protein F14M19.50 -
Arabidopsis thaliana, partial (24%)
Length = 685
Score = 27.3 bits (59), Expect = 5.9
Identities = 14/42 (33%), Positives = 27/42 (63%)
Frame = +3
Query: 9 PRSQVKKLSTLILLTLFMLTLVIIVLLALGILYLPNTTDDSL 50
P+S K ST L+ F++TL++ +++ LG+L + + +SL
Sbjct: 216 PKSAGKTFSTPPPLSGFLVTLLLWLMVLLGVLLIGDMLQNSL 341
>TC79793 weakly similar to GP|6630464|gb|AAF19552.1| F23N19.4 {Arabidopsis
thaliana}, partial (7%)
Length = 1580
Score = 27.3 bits (59), Expect = 5.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -3
Query: 11 SQVKKLSTLILLTLFMLTLVIIVLLALGILYLPNT 45
S+ K ++L LTL ML+++++ + LG LP+T
Sbjct: 315 SENKSKASLTSLTLHMLSIMVLYITTLG*TKLPST 211
>TC78237 similar to GP|17933299|gb|AAL48232.1 AT4g17800/dl4935c {Arabidopsis
thaliana}, partial (59%)
Length = 1166
Score = 26.9 bits (58), Expect = 7.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 212 FSSVPWWNDLSECARK 227
F VPWW S C RK
Sbjct: 581 FECVPWWRPRSSCGRK 628
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,809,943
Number of Sequences: 36976
Number of extensions: 100410
Number of successful extensions: 608
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of query: 257
length of database: 9,014,727
effective HSP length: 94
effective length of query: 163
effective length of database: 5,538,983
effective search space: 902854229
effective search space used: 902854229
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC137702.2