BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137670.5 + phase: 0
(409 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78459 similar to GP|12643061|gb|AAK00450.1 unknown protein {Or... 798 0.0
TC78878 similar to GP|4519792|dbj|BAA75744.1 Asp1 {Arabidopsis t... 120 1e-27
TC77309 similar to GP|4519792|dbj|BAA75744.1 Asp1 {Arabidopsis t... 112 3e-25
BQ138888 weakly similar to PIR|S47006|S470 zinc finger protein G... 95 4e-20
TC86175 similar to GP|23617209|dbj|BAC20880. contains ESTs C2856... 93 2e-19
BQ138601 similar to GP|23617209|db contains ESTs C28562(C61610) ... 92 3e-19
TC78001 similar to GP|21618169|gb|AAM67219.1 ARF GAP-like zinc f... 91 6e-19
BF648079 similar to GP|6648206|gb|A putative GTPase activating p... 82 5e-16
BF650087 similar to GP|6648206|gb|A putative GTPase activating p... 82 5e-16
BF646618 similar to GP|21594052|gb putative GTPase activating pr... 80 2e-15
TC78002 homologue to GP|23617209|dbj|BAC20880. contains ESTs C28... 75 5e-14
CA860506 similar to GP|12697977|dbj KIAA1716 protein {Homo sapie... 70 1e-12
TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ... 52 4e-07
TC82545 similar to GP|17064858|gb|AAL32583.1 putative protein {A... 51 9e-07
AL367399 similar to GP|17064858|gb| putative protein {Arabidopsi... 50 1e-06
TC87207 similar to GP|9802557|gb|AAF99759.1| F22O13.16 {Arabidop... 36 0.024
BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus... 34 0.090
BG448933 similar to PIR|T09648|T09 nucleolin homolog nuM1 - alfa... 33 0.15
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un... 33 0.20
TC85559 similar to PIR|T07012|T07012 acetyl-CoA carboxylase (EC ... 32 0.58
>TC78459 similar to GP|12643061|gb|AAK00450.1 unknown protein {Oryza
sativa}, partial (67%)
Length = 1619
Score = 798 bits (2061), Expect = 0.0
Identities = 409/409 (100%), Positives = 409/409 (100%)
Frame = +2
Query: 1 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60
MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS
Sbjct: 194 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 373
Query: 61 FVRSTNLDSWTPEQLKMMSFGGNSRAQVFFRQHGWNGDGKVEAKYTSRAAELYKQLLSKE 120
FVRSTNLDSWTPEQLKMMSFGGNSRAQVFFRQHGWNGDGKVEAKYTSRAAELYKQLLSKE
Sbjct: 374 FVRSTNLDSWTPEQLKMMSFGGNSRAQVFFRQHGWNGDGKVEAKYTSRAAELYKQLLSKE 553
Query: 121 VAKSMSEEAALSAPPAASSQSAQGTNGLPDVKTNEVPIEKTVEKTVEKPEKTESSSSPRA 180
VAKSMSEEAALSAPPAASSQSAQGTNGLPDVKTNEVPIEKTVEKTVEKPEKTESSSSPRA
Sbjct: 554 VAKSMSEEAALSAPPAASSQSAQGTNGLPDVKTNEVPIEKTVEKTVEKPEKTESSSSPRA 733
Query: 181 YTAVSNNLKKPIGAKKTGKSGGLGARKLTRKPSESLYEQKPEELPAPVSSSTITKNNLPS 240
YTAVSNNLKKPIGAKKTGKSGGLGARKLTRKPSESLYEQKPEELPAPVSSSTITKNNLPS
Sbjct: 734 YTAVSNNLKKPIGAKKTGKSGGLGARKLTRKPSESLYEQKPEELPAPVSSSTITKNNLPS 913
Query: 241 GPPLTSRFEYTEDVQSSELNSGGSNVTGHVSVPKSSSSFFSDFGMDSGFQKKSGPSSSKV 300
GPPLTSRFEYTEDVQSSELNSGGSNVTGHVSVPKSSSSFFSDFGMDSGFQKKSGPSSSKV
Sbjct: 914 GPPLTSRFEYTEDVQSSELNSGGSNVTGHVSVPKSSSSFFSDFGMDSGFQKKSGPSSSKV 1093
Query: 301 QIQESDEARKKFSNAKSISSSQFFGDQNKANADAQATLSKFSGSSAISSADLFGDSSDNV 360
QIQESDEARKKFSNAKSISSSQFFGDQNKANADAQATLSKFSGSSAISSADLFGDSSDNV
Sbjct: 1094QIQESDEARKKFSNAKSISSSQFFGDQNKANADAQATLSKFSGSSAISSADLFGDSSDNV 1273
Query: 361 DLAASDLINRISFQAQQDISSLKNIAGETGKKLTSLASSLMTDLQDRIL 409
DLAASDLINRISFQAQQDISSLKNIAGETGKKLTSLASSLMTDLQDRIL
Sbjct: 1274DLAASDLINRISFQAQQDISSLKNIAGETGKKLTSLASSLMTDLQDRIL 1420
>TC78878 similar to GP|4519792|dbj|BAA75744.1 Asp1 {Arabidopsis thaliana},
partial (53%)
Length = 1839
Score = 120 bits (300), Expect = 1e-27
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Frame = +2
Query: 14 RKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPE 73
R+L+++ NK C DC+ KNP WASV+YG+F+C++CS HR LGVHISFVRS +DSW+
Sbjct: 113 RELQSEPSNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSDL 292
Query: 74 QLKMMSFGGNSRAQVFFRQHGWNGDGKVEAKYTSRAAELYKQLLS-----------KEVA 122
Q+K M GGN F Q+G + + + KY S AA +Y+ + V
Sbjct: 293 QIKKMEAGGNRNLNTFLSQYGISKETDIITKYNSNAASIYRDRIQAIAEGRSWRDPPVVK 472
Query: 123 KSMSEEAALSAPPAASSQSAQG 144
++ S A PP A++ + G
Sbjct: 473 ENASTRAGKGKPPLAAASNGGG 538
>TC77309 similar to GP|4519792|dbj|BAA75744.1 Asp1 {Arabidopsis thaliana},
partial (77%)
Length = 2042
Score = 112 bits (279), Expect = 3e-25
Identities = 54/136 (39%), Positives = 79/136 (57%)
Frame = +2
Query: 14 RKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPE 73
R L+++ NK C DC+ KNP WASV+YGIF+C++CS HR LGVHISFVRS +D+W+
Sbjct: 176 RDLQSQPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDAWSEI 355
Query: 74 QLKMMSFGGNSRAQVFFRQHGWNGDGKVEAKYTSRAAELYKQLLSKEVAKSMSEEAALSA 133
Q+K M GGN F ++ + + KY + AA +Y+ + +++SE +
Sbjct: 356 QIKKMEAGGNDNLNAFLAKYSIPKETDIVTKYNTNAASVYRDRI-----QALSEGRSWRD 520
Query: 134 PPAASSQSAQGTNGLP 149
PP G+ G P
Sbjct: 521 PPVVKEN--LGSKGRP 562
>BQ138888 weakly similar to PIR|S47006|S470 zinc finger protein GCS1 - yeast
(Saccharomyces cerevisiae), partial (25%)
Length = 665
Score = 95.1 bits (235), Expect = 4e-20
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 19/157 (12%)
Frame = +3
Query: 16 LKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQL 75
++ ++N C DCNA +P WAS GIF+C+ CS +HR LGVHISF+RS +D++ +L
Sbjct: 126 IQKTNDNNKCVDCNAPSPQWASPKLGIFMCLSCSGIHRGLGVHISFIRSITMDAFKGAEL 305
Query: 76 KMMSFGGNSRAQVFFRQHGWN-------GDGKVEAKYTSRAAELYKQLLS-----KEVAK 123
M+ GGN Q FF H N ++ +Y S A + +K+ LS +E K
Sbjct: 306 ARMAAGGNKPFQEFFDAHPSNTKDNRTFEGSSIQERYDSEAGDEWKERLSCKVEDREFDK 485
Query: 124 S-------MSEEAALSAPPAASSQSAQGTNGLPDVKT 153
S + A AP + + +A + P KT
Sbjct: 486 SNLPKRLPKKDNAGTGAPLSGQASAAGSRSQTPLSKT 596
>TC86175 similar to GP|23617209|dbj|BAC20880. contains ESTs C28562(C61610)
C25917(C11090)~similar to ARF GAP-like zinc
finger-containing protein, partial (47%)
Length = 1922
Score = 93.2 bits (230), Expect = 2e-19
Identities = 40/70 (57%), Positives = 49/70 (69%)
Frame = +2
Query: 21 ENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSF 80
EN+ C DC AK P WASV GIF+C+ CS +HRSLGVHIS VRS LD+W PEQ+ +
Sbjct: 218 ENRECADCKAKGPRWASVNLGIFICMSCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQS 397
Query: 81 GGNSRAQVFF 90
GN RA ++
Sbjct: 398 MGNERANSYW 427
>BQ138601 similar to GP|23617209|db contains ESTs C28562(C61610)
C25917(C11090)~similar to ARF GAP-like zinc
finger-containing protein, partial (22%)
Length = 651
Score = 92.4 bits (228), Expect = 3e-19
Identities = 47/116 (40%), Positives = 65/116 (55%), Gaps = 8/116 (6%)
Frame = +2
Query: 21 ENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSF 80
+N+ C DC K P WASV GIF+C+ CS +HRSLGVHIS VRST LD+W P+Q+ M F
Sbjct: 215 DNRECADCWTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSYMQF 394
Query: 81 GGNSRAQVF--------FRQHGWNGDGKVEAKYTSRAAELYKQLLSKEVAKSMSEE 128
GN ++ F ++ + + + AKY + L +L S + M E
Sbjct: 395 MGNVKSNKHWEAKLPPNFDRNAYGIEKFIRAKYVEKKWALQGELQSASKSADMMFE 562
>TC78001 similar to GP|21618169|gb|AAM67219.1 ARF GAP-like zinc
finger-containing protein ZIGA3 {Arabidopsis thaliana},
partial (46%)
Length = 1265
Score = 91.3 bits (225), Expect = 6e-19
Identities = 39/70 (55%), Positives = 49/70 (69%)
Frame = +1
Query: 21 ENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSF 80
EN+ C DC AK P WASV GIF+C+ CS +HRSLGVHIS VRS LD+W PEQ+ +
Sbjct: 301 ENRECADCKAKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQS 480
Query: 81 GGNSRAQVFF 90
GN +A ++
Sbjct: 481 MGNEKANSYW 510
>BF648079 similar to GP|6648206|gb|A putative GTPase activating protein
{Arabidopsis thaliana}, partial (19%)
Length = 582
Score = 81.6 bits (200), Expect = 5e-16
Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +2
Query: 16 LKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQL 75
L ++ NK C DC + P W S + G+F+CI CS +HRSLGVHIS V S NLD WT EQ+
Sbjct: 332 LMRQAGNKFCADCGSSEPKWVSSSLGVFICIKCSGIHRSLGVHISKVLSLNLDDWTDEQV 511
Query: 76 -KMMSFGGNS 84
+++ GGN+
Sbjct: 512 DSLVNLGGNT 541
>BF650087 similar to GP|6648206|gb|A putative GTPase activating protein
{Arabidopsis thaliana}, partial (21%)
Length = 589
Score = 81.6 bits (200), Expect = 5e-16
Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +3
Query: 16 LKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQL 75
L ++ NK C DC + P W S + G+F+CI CS +HRSLGVHIS V S NLD WT EQ+
Sbjct: 372 LMRQAGNKFCADCGSSEPKWVSSSLGVFICIKCSGIHRSLGVHISKVLSLNLDDWTDEQV 551
Query: 76 -KMMSFGGNS 84
+++ GGN+
Sbjct: 552 DSLVNLGGNT 581
>BF646618 similar to GP|21594052|gb putative GTPase activating protein
{Arabidopsis thaliana}, partial (38%)
Length = 652
Score = 79.7 bits (195), Expect = 2e-15
Identities = 41/114 (35%), Positives = 63/114 (54%), Gaps = 4/114 (3%)
Frame = +1
Query: 14 RKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPE 73
+ L + +N+ C DCNA +P WAS G+F+C+ C VHRSLG HIS V S LD W+ +
Sbjct: 259 KDLLHQKDNRVCSDCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDDWSDD 438
Query: 74 QL-KMMSFGGNSRAQVFFRQH---GWNGDGKVEAKYTSRAAELYKQLLSKEVAK 123
++ M+ GGN+ A + + G+ G +A + RA + + +E K
Sbjct: 439 EVDAMIEVGGNASANSIYEAYIPEGYTKPGP-DASHEQRAKFIRSKYXLQEFLK 597
>TC78002 homologue to GP|23617209|dbj|BAC20880. contains ESTs C28562(C61610)
C25917(C11090)~similar to ARF GAP-like zinc
finger-containing protein, partial (26%)
Length = 737
Score = 75.1 bits (183), Expect = 5e-14
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +3
Query: 33 PTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNSRAQVFF 90
P WASV GIF+C+ CS +HRSLGVHIS VRS LD+W PEQ+ + GN +A ++
Sbjct: 468 PRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYW 641
>CA860506 similar to GP|12697977|dbj KIAA1716 protein {Homo sapiens},
partial (7%)
Length = 362
Score = 70.5 bits (171), Expect = 1e-12
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +3
Query: 30 AKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNSRAQVF 89
+K+P WAS + LCI+CS +HRSLGVH+S V+S LD W PE +++M GN++A
Sbjct: 6 SKDPQWASTNFSTLLCIECSGIHRSLGVHVSKVKSLMLDKWEPESIEVMLRLGNAKANQI 185
Query: 90 F 90
+
Sbjct: 186Y 188
>TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
partial (61%)
Length = 1288
Score = 52.0 bits (123), Expect = 4e-07
Identities = 64/272 (23%), Positives = 115/272 (41%), Gaps = 9/272 (3%)
Frame = +3
Query: 99 GKVEAKYTSRAAELYKQLLSKEVAKSMSEEAALSAPPAASSQSAQGTNGLPDVKTNEVPI 158
GK +A+ +A KQ + +EVA + ++S +S++ + P VK P
Sbjct: 183 GKRQAEEEVKAVSAKKQKV-EEVAAKQKALKVVKKEESSSEESSESEDEQPVVKA-PAPS 356
Query: 159 EKTVEK--TVEK--PEKTESSSSPRAYTAVSNNLKKPIGAKKTGKSGGLGARKLTRKPSE 214
+KT K V+K PE T S + ++ +KKP+ K+G A+K+ E
Sbjct: 357 KKTPAKKGNVKKAQPETTSEESDSDSSSSDEEEVKKPVSKAVPSKNGSAPAKKVDTSEEE 536
Query: 215 SLYEQKPEELPAPVSSSTITKNNLPSGPPLTSRFEYTEDV----QSSELNSGGSNVTGHV 270
E+ +E P + + +KN S E T++ + E + + + +
Sbjct: 537 D-SEESSDEDKKPAAKAVPSKNGSAPAKKAASDEEDTDESSDEDEEDEKPAAKAVPSKNG 713
Query: 271 SVP-KSSSSFFSDFGMDSGFQKKSGPSSSKVQIQESDEARKKFSNAKSISSSQFFGDQNK 329
SVP K + + SD +S ++ P ++K S +K S++ S + D++
Sbjct: 714 SVPAKKADTESSDEDSESSDEEDKKP-AAKASKNVSAPTKKAASSSDEESDEESDEDEDA 890
Query: 330 ANADAQATLSKFSGSSAISSADLFGDSSDNVD 361
A ++K S + S D DSS + D
Sbjct: 891 KPVSKPAAVAKKSKKDSSDSDDEDDDSSSDED 986
Score = 28.5 bits (62), Expect = 4.9
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +3
Query: 98 DGKVEAKYTSRAAELYKQLLSKEVAKSMSEEAA--LSAPPA-ASSQSAQGTNGLPDVKTN 154
+G V AK + S E K + +A+ +SAP A+S S + ++ D +
Sbjct: 708 NGSVPAKKADTESSDEDSESSDEEDKKPAAKASKNVSAPTKKAASSSDEESDEESDEDED 887
Query: 155 EVPIEKTVEKTVEKPEKTESSSSPRAYTAVSNNLKKPIGAKKTGK 199
P+ K +K +K S S + S+ KKP+ AKK K
Sbjct: 888 AKPVSKPAA-VAKKSKKDSSDSDDEDDDSSSDEDKKPVAAKKEDK 1019
>TC82545 similar to GP|17064858|gb|AAL32583.1 putative protein {Arabidopsis
thaliana}, partial (22%)
Length = 688
Score = 50.8 bits (120), Expect = 9e-07
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 14 RKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPE 73
R L N+ C +CN+ P + + F+C +CS +HR V+S ++ +T +
Sbjct: 200 RTLLKLEPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSVSMAKFTSQ 370
Query: 74 QLKMMSFGGNSRA-QVFFRQHGWNGDGKVEAKYTSRAAELYKQL 116
++ + GGN RA +++F++ + ++ +R E K +
Sbjct: 371 EVTALQEGGNQRAKEIYFKEWDAQRNSFPDSSNVNRLREFIKHV 502
>AL367399 similar to GP|17064858|gb| putative protein {Arabidopsis thaliana},
partial (15%)
Length = 461
Score = 50.4 bits (119), Expect = 1e-06
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 14 RKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPE 73
R L + N+ C +CN+ P + + F+C CS +HR V+S ++ +T +
Sbjct: 217 RGLLKLTPNRRCINCNSMGPQYVCTNFWTFVCTKCSGIHREF---THRVKSISMAKFTAQ 387
Query: 74 QLKMMSFGGNSRA-QVFFRQ 92
++ + GGN RA ++FF++
Sbjct: 388 EVSALQEGGNQRAKEIFFKE 447
>TC87207 similar to GP|9802557|gb|AAF99759.1| F22O13.16 {Arabidopsis
thaliana}, partial (25%)
Length = 617
Score = 36.2 bits (82), Expect = 0.024
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 12 VFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAV 51
+ R L N+ C +CN+ P + T+ F+CI CS +
Sbjct: 362 IIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCITCSGI 481
>BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus
norvegicus}, partial (9%)
Length = 620
Score = 34.3 bits (77), Expect = 0.090
Identities = 35/127 (27%), Positives = 54/127 (41%), Gaps = 14/127 (11%)
Frame = +1
Query: 253 DVQSSELNSGGSNVTGHVSVPKSSSSFFSDFGMDSGFQKKSGPSSSKVQIQESDEARKKF 312
D +SS+ + S+ + S S +S SD DS S S + E KK
Sbjct: 235 DEKSSDSSDSDSSDSSDGSDSDSDASDDSDDSSDSSSDDSS--SDEEPVPAPKKEKAKKA 408
Query: 313 SNAKSISSSQFFGDQNKANADAQ--------------ATLSKFSGSSAISSADLFGDSSD 358
AKS+SSS D + + ++++ ++ S S SS+ SS+D DSS
Sbjct: 409 KKAKSVSSSSDSSDDSSSESESEPEPXNVPLPESDDSSSASSDSDSSSDSSSDSSSDSSS 588
Query: 359 NVDLAAS 365
D +S
Sbjct: 589 XSDXDSS 609
>BG448933 similar to PIR|T09648|T09 nucleolin homolog nuM1 - alfalfa, partial
(29%)
Length = 663
Score = 33.5 bits (75), Expect = 0.15
Identities = 48/213 (22%), Positives = 79/213 (36%)
Frame = +2
Query: 125 MSEEAALSAPPAASSQSAQGTNGLPDVKTNEVPIEKTVEKTVEKPEKTESSSSPRAYTAV 184
+S + L P +S +SA + P V + V K ++ E+ K S+ +
Sbjct: 53 ISHSSLLFIMPKSSKKSATKVDAAP-VVVSPVKSGKKGKRQAEEEVKAVSAKKQKVEEVA 229
Query: 185 SNNLKKPIGAKKTGKSGGLGARKLTRKPSESLYEQKPEELPAPVSSSTITKNNLPSGPPL 244
+ + K+ S + SES EQ + PAP + K N+ P
Sbjct: 230 AKQKALKVVKKEESSS---------EESSESEDEQPVVKAPAPSKKTPAKKGNVKKAQPE 382
Query: 245 TSRFEYTEDVQSSELNSGGSNVTGHVSVPKSSSSFFSDFGMDSGFQKKSGPSSSKVQIQE 304
T+ E D SS+ V P S + K+G + +K ++
Sbjct: 383 TTSEESDSDSSSSD--------EEEVKKPVSKA-----------VPSKNGSAPAK-KVDT 502
Query: 305 SDEARKKFSNAKSISSSQFFGDQNKANADAQAT 337
SDE +K AK++ S KA +D + T
Sbjct: 503 SDEDKK--PAAKAVPSKNGSAPAKKAASDEEDT 595
>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
protein {Arabidopsis thaliana}, partial (46%)
Length = 2077
Score = 33.1 bits (74), Expect = 0.20
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = -2
Query: 224 LPAPVSSSTITKNNLPSGPPLTSRFEYTEDVQSSELNSGGSNVTGHVSVPKSSSSFFSDF 283
LP+ SSS+ +K++ PS PP F ++ +SS +S S+ + S S+ FFS+F
Sbjct: 516 LPSSSSSSSSSKSSSPSLPPFA--FFFSTPSKSSSSSSNSSSKSSLSSSSNSTRFFFSNF 343
Score = 29.6 bits (65), Expect = 2.2
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Frame = -2
Query: 229 SSSTITKNNLPSGPPLTSRFEYTEDVQSSELNSGGSNVTGHVSVPKSSSSFFSDFG---- 284
SSS+ + +++ + P +S + +S L+S S ++ S +SS F +
Sbjct: 741 SSSSSSSSSISNSPAFSSSSSSSLSSSASSLSSPFS*LSSSFSKYSVNSSIFKNLSSIPP 562
Query: 285 -MDSGFQKKSGPSSSKVQIQESDEARKK----------FSNAKSISSSQFFGDQNKANAD 333
+ F S SSS S + K F + S SSS + +N+
Sbjct: 561 PLTFSFSSSSSSSSSLPSSSSSSSSSKSSSPSLPPFAFFFSTPSKSSS------SSSNSS 400
Query: 334 AQATLSKFSGSSAISSADLFGDSSDNVDLAAS 365
++++LS S S+ ++ F S ++ A S
Sbjct: 399 SKSSLSSSSNSTRFFFSNFFPTSKGTLNCAIS 304
>TC85559 similar to PIR|T07012|T07012 acetyl-CoA carboxylase (EC 6.4.1.2) -
potato chloroplast, partial (66%)
Length = 5011
Score = 31.6 bits (70), Expect = 0.58
Identities = 34/130 (26%), Positives = 56/130 (42%), Gaps = 2/130 (1%)
Frame = -1
Query: 277 SSFFSDFGMDSGFQKKSGPSSSKVQIQESDEARKKFSNAKSISSSQFF-GDQNKANADAQ 335
SSF S + SSSK + S + K FS S SS F G +K ++
Sbjct: 3745 SSFSEGSSSSSKLFSEGSSSSSKPFSEGSSSSSKPFSEGSSSSSKPFSEGSSSKLFSEGS 3566
Query: 336 ATLSKFSGSSAISSADLFGDSSDNVDLAASDLINRISFQAQQDISSLKNIAGETGKKLT- 394
++ SK SS+ LF + S ++S + S + S N++ G ++
Sbjct: 3565 SSSSKLFSEG--SSSKLFSEGSS----SSSKPFSEGSSSELNSMGSTGNMSSSIGFQVPG 3404
Query: 395 SLASSLMTDL 404
S+ SS+ ++L
Sbjct: 3403 SIKSSIRSEL 3374
Score = 30.8 bits (68), Expect = 1.00
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Frame = -1
Query: 275 SSSSFFSDFGMDSGFQKKSGPSSSKVQIQE-SDEARKKFSNAKSISSSQFF--GDQNKAN 331
SSS FS+ S G SSS E S + K FS SSS+ F G + +
Sbjct: 3721 SSSKLFSEGSSSSSKPFSEGSSSSSKPFSEGSSSSSKPFSEG---SSSKLFSEGSSSSSK 3551
Query: 332 ADAQATLSKFSGSSAISSADLFGDSSD---NVDLAASDLINRISFQAQQDISS 381
++ + SK + SS+ F + S N + ++ + I FQ I S
Sbjct: 3550 LFSEGSSSKLFSEGSSSSSKPFSEGSSSELNSMGSTGNMSSSIGFQVPGSIKS 3392
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.307 0.123 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,432,970
Number of Sequences: 36976
Number of extensions: 138188
Number of successful extensions: 820
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of query: 409
length of database: 9,014,727
effective HSP length: 98
effective length of query: 311
effective length of database: 5,391,079
effective search space: 1676625569
effective search space used: 1676625569
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC137670.5