BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137670.4 + phase: 0
(324 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78459 similar to GP|12643061|gb|AAK00450.1 unknown protein {Or... 446 e-126
TC87068 similar to PIR|G96703|G96703 unknown protein 30164-3299... 35 0.039
TC93857 similar to SP|Q05049|MUC1_XENLA Integumentary mucin C.1 ... 34 0.067
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un... 32 0.25
TC78878 similar to GP|4519792|dbj|BAA75744.1 Asp1 {Arabidopsis t... 32 0.43
BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus... 31 0.57
TC89077 weakly similar to GP|21740511|emb|CAD41490. OSJNBa0029H0... 31 0.57
TC84970 GP|15028978|emb|CAC45057. type II keratin E2 {Oncorhynch... 30 0.97
AL369112 weakly similar to GP|13540393|gb| histone H1 {Pisum sat... 30 1.6
TC84776 similar to GP|21593061|gb|AAM65010.1 unknown {Arabidopsi... 29 2.8
TC81547 similar to GP|13877739|gb|AAK43947.1 unknown protein {Ar... 28 3.7
AA660430 similar to GP|13430500|gb| unknown protein {Arabidopsis... 28 3.7
TC78130 similar to GP|22652125|gb|AAN03626.1 BEL1-related homeot... 28 3.7
TC89114 similar to GP|14517476|gb|AAK62628.1 At2g43320/T1O24.6 {... 28 3.7
TC92181 similar to GP|14517476|gb|AAK62628.1 At2g43320/T1O24.6 {... 28 3.7
BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xan... 28 4.8
TC88423 similar to GP|9758777|dbj|BAB09075.1 contains similarity... 28 4.8
TC78821 similar to GP|15293173|gb|AAK93697.1 unknown protein {Ar... 28 4.8
TC90905 similar to PIR|H84432|H84432 probable helicase [imported... 28 4.8
TC86098 similar to GP|14719329|gb|AAK73147.1 putative RING-H2 fi... 28 4.8
>TC78459 similar to GP|12643061|gb|AAK00450.1 unknown protein {Oryza
sativa}, partial (67%)
Length = 1619
Score = 446 bits (1146), Expect = e-126
Identities = 244/335 (72%), Positives = 281/335 (83%), Gaps = 11/335 (3%)
Frame = +2
Query: 1 MSFGGNSRAQIFFKQHGWTDGGKIEAKYTSRAAELYRQILTKEVAKSMALEKGLPSSPVA 60
MSFGGNSRAQ+FF+QHGW GK+EAKYTSRAAELY+Q+L+KEVAKSM+ E L + P A
Sbjct: 425 MSFGGNSRAQVFFRQHGWNGDGKVEAKYTSRAAELYKQLLSKEVAKSMSEEAALSAPPAA 604
Query: 61 S----QSSNGFLDVRTSEV----LKENTLDKAEKLESTSSPRASHTSASNNLKKSIGGKK 112
S Q +NG DV+T+EV E T++K EK ES+SSPRA +T+ SNNLKK IG KK
Sbjct: 605 SSQSAQGTNGLPDVKTNEVPIEKTVEKTVEKPEKTESSSSPRA-YTAVSNNLKKPIGAKK 781
Query: 113 PGKSGGLGARKLNKKPSESFYEQKPEEPPAPVPST--TNNNVSARPSMTSRFEYVDNVQS 170
GKSGGLGARKL +KPSES YEQKPEE PAPV S+ T NN+ + P +TSRFEY ++VQS
Sbjct: 782 TGKSGGLGARKLTRKPSESLYEQKPEELPAPVSSSTITKNNLPSGPPLTSRFEYTEDVQS 961
Query: 171 SELDSRGSNTFNHVSVPK-SSNFFADFGMDSGFPKKFGSNTSKVQIEESDEARKKFSNAK 229
SEL+S GSN HVSVPK SS+FF+DFGMDSGF KK G ++SKVQI+ESDEARKKFSNAK
Sbjct: 962 SELNSGGSNVTGHVSVPKSSSSFFSDFGMDSGFQKKSGPSSSKVQIQESDEARKKFSNAK 1141
Query: 230 SISSSQFFGDQNKARDAETRATLSKFSSSSAISSADFFGDSADSSIDLAASDLINRLSFQ 289
SISSSQFFGDQNKA +A+ +ATLSKFS SSAISSAD FGDS+D ++DLAASDLINR+SFQ
Sbjct: 1142SISSSQFFGDQNKA-NADAQATLSKFSGSSAISSADLFGDSSD-NVDLAASDLINRISFQ 1315
Query: 290 AQQDISSLKNIAGETGKKLSSLASSLMTDLQDRIL 324
AQQDISSLKNIAGETGKKL+SLASSLMTDLQDRIL
Sbjct: 1316AQQDISSLKNIAGETGKKLTSLASSLMTDLQDRIL 1420
>TC87068 similar to PIR|G96703|G96703 unknown protein 30164-32998
[imported] - Arabidopsis thaliana, partial (24%)
Length = 711
Score = 35.0 bits (79), Expect = 0.039
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Frame = +2
Query: 59 VASQSSNGFLDVRTSEVLKENTLDKAEKLESTSSPRASHTSASNNLKKS---IGGKKPGK 115
++ +SNGFL RTS +++ + L++ S S +L++S + GK P
Sbjct: 17 ISKPNSNGFLTKRTSSFQIRSSVSSSSILKNAKGASKSFDGGSRSLERSKILLNGKPPSS 196
Query: 116 SGGLGARKLNKKPSESFYEQKPEEPPAPVPST-TNNNV 152
S + + K + ++ ++ P +P T +NV
Sbjct: 197 SFNQSSERTKDKEENNNWKGSLDDKPNDLPLVDTKDNV 310
>TC93857 similar to SP|Q05049|MUC1_XENLA Integumentary mucin C.1 (FIM-C.1)
(Fragment). [African clawed frog] {Xenopus laevis},
partial (8%)
Length = 763
Score = 34.3 bits (77), Expect = 0.067
Identities = 27/104 (25%), Positives = 43/104 (40%), Gaps = 2/104 (1%)
Frame = +2
Query: 90 TSSPRASHTSASNNLKKSIGGKKPGKSGGLGARKLNKKP--SESFYEQKPEEPPAPVPST 147
T P+ SHT+ + N+ + KP S + +KP S + + P P P+T
Sbjct: 71 TQKPKLSHTTTTTNVTQ-----KPKLSHTTTTTNVTQKPKPSHTITTTNVTQKPKPNPTT 235
Query: 148 TNNNVSARPSMTSRFEYVDNVQSSELDSRGSNTFNHVSVPKSSN 191
T NV+ +P + NV + + T N PK S+
Sbjct: 236 TTTNVTPKPK-PNPTTTTTNVTPKPKPNHTTTTTNVTPKPKPSH 364
Score = 30.4 bits (67), Expect = 0.97
Identities = 18/71 (25%), Positives = 32/71 (44%)
Frame = +2
Query: 90 TSSPRASHTSASNNLKKSIGGKKPGKSGGLGARKLNKKPSESFYEQKPEEPPAPVPSTTN 149
T P+ SHT+ + N+ + KP + KP+ + + P P +TT
Sbjct: 341 TPKPKPSHTTTTTNVTQK---PKPNPTTTTTNVAPKPKPNHTTTTTNVTQKPKPNHTTTT 511
Query: 150 NNVSARPSMTS 160
NV+ +P+ T+
Sbjct: 512 TNVTQKPNHTT 544
Score = 28.1 bits (61), Expect = 4.8
Identities = 18/67 (26%), Positives = 28/67 (40%)
Frame = +2
Query: 90 TSSPRASHTSASNNLKKSIGGKKPGKSGGLGARKLNKKPSESFYEQKPEEPPAPVPSTTN 149
T P+ +HT+ + N+ KP KPS + + P P P+TT
Sbjct: 296 TPKPKPNHTTTTTNVTP-----KP-------------KPSHTTTTTNVTQKPKPNPTTTT 421
Query: 150 NNVSARP 156
NV+ +P
Sbjct: 422 TNVAPKP 442
>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
protein {Arabidopsis thaliana}, partial (46%)
Length = 2077
Score = 32.3 bits (72), Expect = 0.25
Identities = 29/112 (25%), Positives = 48/112 (41%)
Frame = -2
Query: 203 PKKFGSNTSKVQIEESDEARKKFSNAKSISSSQFFGDQNKARDAETRATLSKFSSSSAIS 262
PKK T + S + S++ SIS+S F + + + ++ S SS +
Sbjct: 798 PKKSSYLTFPISSASSSSSSSSSSSSSSISNSPAF---SSSSSSSLSSSASSLSSPFS*L 628
Query: 263 SADFFGDSADSSIDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASS 314
S+ F S +SSI S + L+F SS ++ + SS +SS
Sbjct: 627 SSSFSKYSVNSSIFKNLSSIPPPLTFSFSSSSSSSSSLPSSSSSSSSSKSSS 472
>TC78878 similar to GP|4519792|dbj|BAA75744.1 Asp1 {Arabidopsis thaliana},
partial (53%)
Length = 1839
Score = 31.6 bits (70), Expect = 0.43
Identities = 27/83 (32%), Positives = 35/83 (41%), Gaps = 14/83 (16%)
Frame = +2
Query: 1 MSFGGNSRAQIFFKQHGWTDGGKIEAKYTSRAAELYRQIL--------------TKEVAK 46
M GGN F Q+G + I KY S AA +YR + KE A
Sbjct: 305 MEAGGNRNLNTFLSQYGISKETDIITKYNSNAASIYRDRIQAIAEGRSWRDPPVVKENAS 484
Query: 47 SMALEKGLPSSPVASQSSNGFLD 69
+ A KG P P+A+ S+ G D
Sbjct: 485 TRA-GKGKP--PLAAASNGGGWD 544
>BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus
norvegicus}, partial (9%)
Length = 620
Score = 31.2 bits (69), Expect = 0.57
Identities = 30/135 (22%), Positives = 56/135 (41%)
Frame = +1
Query: 41 TKEVAKSMALEKGLPSSPVASQSSNGFLDVRTSEVLKENTLDKAEKLESTSSPRASHTSA 100
TK+ A+S A++ SS + S+ D S+ + D ++ +SS +S
Sbjct: 199 TKQAAQSDAMDVDEKSSDSSDSDSSDSSDGSDSD---SDASDDSDDSSDSSSDDSSSDEE 369
Query: 101 SNNLKKSIGGKKPGKSGGLGARKLNKKPSESFYEQKPEEPPAPVPSTTNNNVSARPSMTS 160
K KK K+ + + + S S E +PE P+P + +++ ++ S +S
Sbjct: 370 PVPAPKKEKAKKAKKAKSVSSSSDSSDDSSSESESEPEPXNVPLPESDDSSSASSDSDSS 549
Query: 161 RFEYVDNVQSSELDS 175
D+ S S
Sbjct: 550 SDSSSDSSSDSSSXS 594
Score = 28.9 bits (63), Expect = 2.8
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Frame = +1
Query: 165 VDNVQSSELDSRGSNTFNHVSVPKSSNFFADFGMDSGFPKKFGSNTSKVQIEESDEARKK 224
VD S DS S++ + ++ +D DS S+ V + ++A KK
Sbjct: 232 VDEKSSDSSDSDSSDSSDGSDSDSDASDDSDDSSDSSSDDS-SSDEEPVPAPKKEKA-KK 405
Query: 225 FSNAKSISSSQFFGDQNKAR-DAETRATLSKFSSSSAISSADFFGDSADSSIDLAASD 281
AKS+SSS D + + ++E S SSA DS+ S ++SD
Sbjct: 406 AKKAKSVSSSSDSSDDSSSESESEPEPXNVPLPESDDSSSASSDSDSSSDSSSDSSSD 579
>TC89077 weakly similar to GP|21740511|emb|CAD41490. OSJNBa0029H02.6 {Oryza
sativa}, partial (5%)
Length = 1472
Score = 31.2 bits (69), Expect = 0.57
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 5/156 (3%)
Frame = +1
Query: 85 EKLESTSSPRASHTSASNNLKKSIGGKKPGKSGGLGARK----LNKKPSESFYEQKPEEP 140
+KL+S+ SP S GKK SGG ++K +N KPS S + ++ +
Sbjct: 712 KKLKSSKSPSLHEVST---------GKKQRSSGGSTSKKTTKIVNGKPSPSKHAKRGQR- 861
Query: 141 PAPVPSTTNNNVSARPSMTSRFEYVDNVQSSELDSRGSNTFNHVSV-PKSSNFFADFGMD 199
+ S T+ E V+ SEL + T + S D G D
Sbjct: 862 --------------KASKTNFHEGVNESSDSELPNPEETTIAEAEINSDGSKGEQDEGSD 999
Query: 200 SGFPKKFGSNTSKVQIEESDEARKKFSNAKSISSSQ 235
KK N + + ++KK KS+S+ +
Sbjct: 1000VNITKKKKPNRKRKSVSWGKRSKKK----KSVSNKK 1095
>TC84970 GP|15028978|emb|CAC45057. type II keratin E2 {Oncorhynchus mykiss},
partial (2%)
Length = 595
Score = 30.4 bits (67), Expect = 0.97
Identities = 20/63 (31%), Positives = 28/63 (43%), Gaps = 7/63 (11%)
Frame = -2
Query: 138 EEPPAPVPSTTNNNVSA----RPSMTSRFEY---VDNVQSSELDSRGSNTFNHVSVPKSS 190
E PP P P NNN A RP+ +S E V + + + N F VS+ +
Sbjct: 258 EPPPLPPPENQNNNAPANFETRPNASSIAELS*KVLELSRKKRNGSNGNRFGSVSIHDNQ 79
Query: 191 NFF 193
+FF
Sbjct: 78 SFF 70
>AL369112 weakly similar to GP|13540393|gb| histone H1 {Pisum sativum},
partial (20%)
Length = 371
Score = 29.6 bits (65), Expect = 1.6
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +2
Query: 83 KAEKLESTSSPRASHTSASNNLKKSIGGKKPGKSGGLGARKLNKKPSESFYEQKPEEPPA 142
K + S S A+ A+ KK+ G K K+ A K +K +E E+ E+P
Sbjct: 53 KKGETASKSQKAAAKKKAAAAAKKADAGAKDAKADTKAAEKPAEKAAEKPAEKAAEKPAE 232
Query: 143 PVPSTTNNNVSARPSMTSRFEYVDNVQSSELDSRGSNTFN 182
+ + A+P+ + + D + + R S+ F+
Sbjct: 233 KAAAKKEDKKDAKPAAKPKAD--DKKKGK*IGPRASDAFS 346
>TC84776 similar to GP|21593061|gb|AAM65010.1 unknown {Arabidopsis
thaliana}, partial (25%)
Length = 432
Score = 28.9 bits (63), Expect = 2.8
Identities = 17/46 (36%), Positives = 24/46 (51%)
Frame = +2
Query: 275 IDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLMTDLQ 320
I L L++ L ++ I + AGETGK L L SSL +L+
Sbjct: 116 ISLVVMGLLDSLLGDGRKFIKRKDSDAGETGKALEELRSSLYNELR 253
>TC81547 similar to GP|13877739|gb|AAK43947.1 unknown protein {Arabidopsis
thaliana}, partial (4%)
Length = 725
Score = 28.5 bits (62), Expect = 3.7
Identities = 17/73 (23%), Positives = 28/73 (38%)
Frame = +3
Query: 132 FYEQKPEEPPAPVPSTTNNNVSARPSMTSRFEYVDNVQSSELDSRGSNTFNHVSVPKSSN 191
+Y P PP P P++ ++ A S + S++ N + P SS
Sbjct: 9 YYNAVPPPPPPPAPTSDQSHSIANAPWASNHSAPPPLSSADQSQSIGNVPPPMPPPNSSA 188
Query: 192 FFADFGMDSGFPK 204
+G DS + K
Sbjct: 189 EKTSYGADSEYEK 227
>AA660430 similar to GP|13430500|gb| unknown protein {Arabidopsis thaliana},
partial (5%)
Length = 720
Score = 28.5 bits (62), Expect = 3.7
Identities = 19/42 (45%), Positives = 24/42 (56%), Gaps = 6/42 (14%)
Frame = -2
Query: 88 ESTSSPRASHTSASNNLKKSIG---GKKP-GKSGGL--GARK 123
ES SSP+ H A NN+ + + GK+P GK GL G RK
Sbjct: 449 ESGSSPKEKHLRAINNVARIVSRGPGKQPEGKQNGLKQGIRK 324
>TC78130 similar to GP|22652125|gb|AAN03626.1 BEL1-related homeotic protein
29 {Solanum tuberosum}, partial (58%)
Length = 2740
Score = 28.5 bits (62), Expect = 3.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 122 RKLNKKPSESFYEQKPEEPPAPVPSTTNNN 151
R P F+ +P PA +PSTTNNN
Sbjct: 439 RNRRHTPVTLFFSIQPPITPATLPSTTNNN 528
>TC89114 similar to GP|14517476|gb|AAK62628.1 At2g43320/T1O24.6 {Arabidopsis
thaliana}, partial (58%)
Length = 941
Score = 28.5 bits (62), Expect = 3.7
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +2
Query: 84 AEKLESTSSPRASHTSASNNLKKSIGGKKPGKSGGLGARKLNKKPSESFYEQKPEEPPAP 143
AE + T+ P + NLK++ + L + PS +FY EE PA
Sbjct: 557 AETVRCTTVP-----NVLGNLKQARDRQSRQPESPLTPSRQTLAPSVNFYAGDWEELPAV 721
Query: 144 VPSTTNNNVSARPSMTSRFEYVD 166
+ + N+ A P M+ F D
Sbjct: 722 LSTVKNDGYEATPGMSLSFSEED 790
>TC92181 similar to GP|14517476|gb|AAK62628.1 At2g43320/T1O24.6 {Arabidopsis
thaliana}, partial (50%)
Length = 1114
Score = 28.5 bits (62), Expect = 3.7
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +2
Query: 84 AEKLESTSSPRASHTSASNNLKKSIGGKKPGKSGGLGARKLNKKPSESFYEQKPEEPPAP 143
AE + T+ P + NLK++ + L + PS +FY EE PA
Sbjct: 212 AETVRCTTVP-----NVLGNLKQARDRQSRQPESPLTPSRQTLAPSVNFYAGDWEELPAV 376
Query: 144 VPSTTNNNVSARPSMTSRFEYVD 166
+ + N+ A P M+ F D
Sbjct: 377 LSTVKNDGYEATPGMSLSFSEED 445
>BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xanthomonas
axonopodis pv. citri str. 306}, partial (2%)
Length = 1131
Score = 28.1 bits (61), Expect = 4.8
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Frame = +3
Query: 74 EVLKENTLDKAEKLESTSSPRASHTSASNNLKKS--IGGKKPGKSGGLGARKLNK----- 126
E ++ + A K E R K+S I K+P SGG A + N+
Sbjct: 24 EEQRKQKSETAGKEEKEPKERGEGGRRDKRTKESGKIRFKRPRGSGGREAGRQNEWNKKV 203
Query: 127 -KPSESFYEQKPEEPPAPVPSTTNNNVSARPSM 158
K S ++ E PP P P+ + +A+ S+
Sbjct: 204 QKNENSRDRERTERPPDPTPAAPRHKETAQKSL 302
>TC88423 similar to GP|9758777|dbj|BAB09075.1 contains similarity to unknown
protein~dbj|BAA90625.1~gene_id:MNJ7.8 {Arabidopsis
thaliana}, partial (15%)
Length = 1640
Score = 28.1 bits (61), Expect = 4.8
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 21/134 (15%)
Frame = +1
Query: 42 KEVAKSMALEKGLPSSPVASQS-SNGFLDVRTSEVLKENTLDKAEKLES-TSSPRASH-- 97
+E A+ A E LP P + + NG D LK L E + TSSP S
Sbjct: 754 EEGAEVPAEEAALPPPPPTTAAFQNGSADYNLKSALKTEGLTPNEFSSTRTSSPELSPGM 933
Query: 98 -----TSASNNLKKSIGGKKP-----GKSGGLGARKLNKKPSESFYEQKPEEP------- 140
+S + + +G + ++GG A N S S KP P
Sbjct: 934 PPIPPSSNQFSARSRLGVRSRYVDTFNQNGGSSA---NLFQSPSVQSVKPALPANAKFFI 1104
Query: 141 PAPVPSTTNNNVSA 154
PAPVPS++ N+ A
Sbjct: 1105PAPVPSSSEQNMEA 1146
>TC78821 similar to GP|15293173|gb|AAK93697.1 unknown protein {Arabidopsis
thaliana}, partial (81%)
Length = 1572
Score = 28.1 bits (61), Expect = 4.8
Identities = 25/90 (27%), Positives = 38/90 (41%), Gaps = 2/90 (2%)
Frame = +3
Query: 204 KKF--GSNTSKVQIEESDEARKKFSNAKSISSSQFFGDQNKARDAETRATLSKFSSSSAI 261
KKF S + QI++ E K+ AKS + D + S +S++A
Sbjct: 207 KKFFKRSEIQQKQIQKLREEEKRELEAKSKKRNSTTSDTVSTVTTSSTNASSSVTSAAAS 386
Query: 262 SSADFFGDSADSSIDLAASDLINRLSFQAQ 291
SSA + S+ L ++I RL F Q
Sbjct: 387 SSASLPDEQNIDSLVLPKQEVIRRLRFLKQ 476
>TC90905 similar to PIR|H84432|H84432 probable helicase [imported] -
Arabidopsis thaliana, partial (20%)
Length = 904
Score = 28.1 bits (61), Expect = 4.8
Identities = 15/49 (30%), Positives = 25/49 (50%), Gaps = 1/49 (2%)
Frame = +2
Query: 128 PSESFYEQKPEEPPAPVPSTTNNNVSARPSMTSRFEYV-DNVQSSELDS 175
P ESFY + P+ PP P S T ++ +T + + D + +E D+
Sbjct: 215 PLESFYYKPPQPPPPPPSSVTVSDDDDCVEITRNTDNILDELDDAECDA 361
>TC86098 similar to GP|14719329|gb|AAK73147.1 putative RING-H2 finger
protein {Oryza sativa}, partial (42%)
Length = 1610
Score = 28.1 bits (61), Expect = 4.8
Identities = 20/59 (33%), Positives = 29/59 (48%), Gaps = 2/59 (3%)
Frame = -3
Query: 103 NLKKSIGGKKPGK-SGGLGARKLNKKPSESFYEQKPEEPPAPVPST-TNNNVSARPSMT 159
N + P K S +G R N +PS S + PPAP PS+ T ++ + R +MT
Sbjct: 480 NCSNNRSNPDPSKNSETVGGRGRNPEPSPSS*KSSKALPPAPAPSSPTPSSPAPRRTMT 304
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.306 0.123 0.324
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,383,380
Number of Sequences: 36976
Number of extensions: 86251
Number of successful extensions: 680
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of query: 324
length of database: 9,014,727
effective HSP length: 96
effective length of query: 228
effective length of database: 5,465,031
effective search space: 1246027068
effective search space used: 1246027068
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC137670.4