TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137669.5 + phase: 0 
         (58 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC91088                                                                76  3e-15
TC80680 similar to GP|14517540|gb|AAK62660.1 AT3g50910/F18B3_190...    41  1e-04
TC81549 similar to GP|6630553|gb|AAF19572.1| unknown protein {Ar...    28  0.94
TC80407 similar to GP|10177633|dbj|BAB10781. gene_id:K18B18.4~un...    26  3.6
BE239650 similar to PIR|D87615|D876 conserved hypothetical prote...    25  4.6
TC79414 homologue to GP|12597871|gb|AAG60180.1 unknown protein {...    25  6.1
BQ135528                                                               25  7.9
TC80043 similar to GP|9759561|dbj|BAB11163.1 MtN21 nodulin prote...    25  7.9

>TC91088 
          Length = 761

 Score = 75.9 bits (185), Expect = 3e-15
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = -3

Query: 21  TTVIALGTAAVAWSYLPAGGESYSAEDHPVPKHDDAAK 58
           TTVIALGTAAVAW+YL AGGESYSA+DHPVPKHDDAAK
Sbjct: 759 TTVIALGTAAVAWAYLRAGGESYSAKDHPVPKHDDAAK 646


>TC80680 similar to GP|14517540|gb|AAK62660.1 AT3g50910/F18B3_190 {Arabidopsis
            thaliana}, partial (33%)
          Length = 1548

 Score = 40.8 bits (94), Expect = 1e-04
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +2

Query: 1    MARRERQRKSKKQKWIW 17
            MARRERQRKSKKQKWIW
Sbjct: 1496 MARRERQRKSKKQKWIW 1546


>TC81549 similar to GP|6630553|gb|AAF19572.1| unknown protein {Arabidopsis
            thaliana}, partial (7%)
          Length = 1309

 Score = 27.7 bits (60), Expect = 0.94
 Identities = 10/21 (47%), Positives = 15/21 (70%)
 Frame = +2

Query: 27   GTAAVAWSYLPAGGESYSAED 47
            G + +AW +LP+ G S+ AED
Sbjct: 1085 GISDLAWQHLPSDGRSFCAED 1147


>TC80407 similar to GP|10177633|dbj|BAB10781. gene_id:K18B18.4~unknown
           protein {Arabidopsis thaliana}, partial (7%)
          Length = 1159

 Score = 25.8 bits (55), Expect = 3.6
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 27  GTAAVAWSYLPAG 39
           GT A AWSY PAG
Sbjct: 846 GTFATAWSYAPAG 884


>BE239650 similar to PIR|D87615|D876 conserved hypothetical protein CC2958
           [imported] - Caulobacter crescentus, partial (10%)
          Length = 628

 Score = 25.4 bits (54), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 31  VAWSYLPAGGESYSAEDHPVPKH 53
           + W  L    ES++ EDH +P H
Sbjct: 546 IEWEKLNGARESHAQEDHLIPLH 614


>TC79414 homologue to GP|12597871|gb|AAG60180.1 unknown protein {Arabidopsis
           thaliana}, partial (36%)
          Length = 1700

 Score = 25.0 bits (53), Expect = 6.1
 Identities = 7/13 (53%), Positives = 12/13 (91%)
 Frame = +1

Query: 6   RQRKSKKQKWIWG 18
           R+++ +K+KWIWG
Sbjct: 457 REQQQQKKKWIWG 495


>BQ135528 
          Length = 834

 Score = 24.6 bits (52), Expect = 7.9
 Identities = 8/30 (26%), Positives = 15/30 (49%)
 Frame = +2

Query: 6   RQRKSKKQKWIWGSLTTVIALGTAAVAWSY 35
           R++ + +QKW+W     V       +A +Y
Sbjct: 629 REKNTNRQKWLWNLTHCVYLFSNGNIAKTY 718


>TC80043 similar to GP|9759561|dbj|BAB11163.1 MtN21 nodulin protein-like
           {Arabidopsis thaliana}, partial (28%)
          Length = 1421

 Score = 24.6 bits (52), Expect = 7.9
 Identities = 11/32 (34%), Positives = 16/32 (49%)
 Frame = +1

Query: 13  QKWIWGSLTTVIALGTAAVAWSYLPAGGESYS 44
           + W+ GS+T V+  G     WS   + G  YS
Sbjct: 709 KNWLSGSITKVVRNGRDTSFWSEKWSRGRQYS 804


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.313    0.126    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,840,294
Number of Sequences: 36976
Number of extensions: 16849
Number of successful extensions: 92
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of query: 58
length of database: 9,014,727
effective HSP length: 34
effective length of query: 24
effective length of database: 7,757,543
effective search space: 186181032
effective search space used: 186181032
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 51 (24.3 bits)