TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137603.8 - phase: 0 /pseudo
         (676 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC92382 similar to PIR|E86189|E86189 hypothetical protein [impor...   132  4e-31
BF644413 similar to GP|6642649|gb| putative glucan synthase {Ara...    50  2e-06
BG586264 similar to PIR|T49193|T491 neoxanthin cleavage enzyme n...    30  3.0
AW691302                                                               29  5.2
TC78855 similar to GP|15147869|dbj|BAB62845. Ndr kinase {Arabido...    29  5.2
TC77842 similar to GP|9294383|dbj|BAB02393.1 cytochrome P450 {Ar...    29  5.2
TC77841 weakly similar to GP|9294387|dbj|BAB02397.1 cytochrome P...    29  5.2
AJ498634 similar to GP|20196906|gb expressed protein {Arabidopsi...    29  5.2

>TC92382 similar to PIR|E86189|E86189 hypothetical protein [imported] -
           Arabidopsis thaliana, partial (7%)
          Length = 739

 Score =  132 bits (332), Expect = 4e-31
 Identities = 57/88 (64%), Positives = 76/88 (85%)
 Frame = +3

Query: 539 AILDVILNWKAQRSMSMHAKLRYILKVVSGAAWVIVLSVTYAYTWDNPPGFAQSIQSWFG 598
           A+LD++L+WKA+  MS+H KLRYI K +SGAAWV++L VTYA++W NP GF Q+I++WFG
Sbjct: 285 ALLDIVLSWKARNVMSLHVKLRYIFKAISGAAWVVILPVTYAFSWKNPSGFGQTIKNWFG 464

Query: 599 SNSHSPSMFILAVVVYLSPNMLAAILFL 626
           + S SPS+FILAV +YLSPN+L+AILFL
Sbjct: 465 NGSGSPSIFILAVFIYLSPNILSAILFL 548



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +3

Query: 513 TAIFNGDVFKKALSVFITAAILKFGQ 538
           + IF+GDVFKK LS+FITAAI K  Q
Sbjct: 18  STIFDGDVFKKVLSIFITAAIWKLAQ 95


>BF644413 similar to GP|6642649|gb| putative glucan synthase {Arabidopsis
           thaliana}, partial (4%)
          Length = 325

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 25/58 (43%), Positives = 37/58 (63%)
 Frame = +1

Query: 169 SMEVDREILETQDKVAEKTEILVPYNILPLDPDSANQAIMRFPEIQAAVFALRNTRGL 226
           S E+  E+    +  +  TE L+ YNI+P+D  ++  AI+ FPE+QAAV AL+  RGL
Sbjct: 103 SEEIPDELKRVMESDSASTEDLIAYNIIPIDATTSTNAIVFFPEVQAAVPALKYFRGL 276


>BG586264 similar to PIR|T49193|T491 neoxanthin cleavage enzyme nc1 -
           Arabidopsis thaliana, partial (17%)
          Length = 660

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -3

Query: 147 LTKAYQTANVLFEVLKAVNMTQSME-VDREILETQDKVAEKTEI 189
           LTK YQT N   E+++ V ++   + +D E+L+ +  V+E +E+
Sbjct: 310 LTKHYQTVNSWKEMIRVVELSHGKKAMDGEVLDRRSFVSEGSEV 179


>AW691302 
          Length = 1028

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 14/51 (27%), Positives = 24/51 (46%)
 Frame = +1

Query: 67  YLCRFYAFEKAHRLDPTSSGRGVRQFKTALLQRLERENDPTLKGRIKKSDA 117
           +LC F    +A+R  P   GRG R  + A  ++  R   P    ++++  A
Sbjct: 130 FLCCFSGLCRANRAGPPGRGRGSRAVRPASTRKNNRPQRPDYPNKVEEGGA 282


>TC78855 similar to GP|15147869|dbj|BAB62845. Ndr kinase {Arabidopsis
           thaliana}, partial (89%)
          Length = 1642

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 105 DPTLKGRIKKSDAREMQSFYQHYYKKYIQALQNAADK 141
           D ++   + K  A   + F +++YK Y+Q LQ+  D+
Sbjct: 198 DVSVSSPVTKQKAAAAKQFIENHYKNYLQGLQDRKDR 308


>TC77842 similar to GP|9294383|dbj|BAB02393.1 cytochrome P450 {Arabidopsis
           thaliana}, partial (27%)
          Length = 998

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 14/37 (37%), Positives = 22/37 (58%)
 Frame = +3

Query: 152 QTANVLFEVLKAVNMTQSMEVDREILETQDKVAEKTE 188
           QT N L+ +L     T+  E+DREI ++ + + EK E
Sbjct: 630 QTNNPLWGLLATTTKTKMKEIDREIHDSLEGIIEKRE 740


>TC77841 weakly similar to GP|9294387|dbj|BAB02397.1 cytochrome P450
           {Arabidopsis thaliana}, partial (38%)
          Length = 1299

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 14/37 (37%), Positives = 22/37 (58%)
 Frame = +3

Query: 152 QTANVLFEVLKAVNMTQSMEVDREILETQDKVAEKTE 188
           QT N L+ +L     T+  E+DREI ++ + + EK E
Sbjct: 759 QTNNPLWGLLATTTKTKMKEIDREIHDSLEGIIEKRE 869


>AJ498634 similar to GP|20196906|gb expressed protein {Arabidopsis thaliana},
           partial (28%)
          Length = 520

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/53 (30%), Positives = 25/53 (46%), Gaps = 9/53 (16%)
 Frame = +3

Query: 337 GEAANLRFMPECLCYIYHHMAFEL---------YGMLAGNVSPMTGENIKPAY 380
           GE  N  ++ ECL Y +HH+A ++         Y ++ G  S   GE+    Y
Sbjct: 252 GEEMNFTYV-ECLLYTFHHLAHKVPNATNSLCGYKIVTGQPSDRLGEDFSEQY 407


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.323    0.137    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,338,867
Number of Sequences: 36976
Number of extensions: 312987
Number of successful extensions: 1563
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of query: 676
length of database: 9,014,727
effective HSP length: 103
effective length of query: 573
effective length of database: 5,206,199
effective search space: 2983152027
effective search space used: 2983152027
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)