BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137603.5 + phase: 0
(370 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC84164 similar to GP|13489174|gb|AAK27808.1 putative peroxin {O... 285 3e-82
BF004323 similar to GP|4337011|gb| zinc-binding peroxisomal inte... 40 0.002
TC87965 similar to GP|11994306|dbj|BAB01736. emb|CAA66822.1~gene... 39 0.003
TC86450 similar to GP|21537318|gb|AAM61659.1 unknown {Arabidopsi... 39 0.004
TC86451 similar to GP|21537318|gb|AAM61659.1 unknown {Arabidopsi... 39 0.004
TC77900 similar to GP|9759182|dbj|BAB09797.1 ATP-dependent Clp p... 31 0.015
TC80104 similar to GP|20197699|gb|AAD20910.3 putative LRR recept... 36 0.021
AJ497196 weakly similar to SP|O60683|PEXA_ Peroxisome assembly p... 36 0.027
TC89939 similar to GP|15289911|dbj|BAB63606. hypothetical protei... 35 0.035
TC82517 homologue to GP|7688065|emb|CAB89694.1 constitutively ph... 34 0.079
BG645859 28 0.12
TC86275 similar to PIR|E96603|E96603 unknown protein F14G9.26 [i... 33 0.13
BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 33 0.13
TC85758 homologue to GP|12248009|gb|AAG50096.1 IAA14 {Arabidopsi... 33 0.13
BQ144079 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 31 0.15
CA860408 GP|10728858|g CG10600 gene product {Drosophila melanoga... 33 0.18
BQ137028 similar to GP|4914334|gb|A F14N23.20 {Arabidopsis thali... 33 0.18
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy... 33 0.18
CA917313 weakly similar to GP|10178016|dbj gb|AAF24581.1~gene_id... 33 0.23
TC88730 weakly similar to GP|21592748|gb|AAM64697.1 PRT1 {Arabid... 33 0.23
>TC84164 similar to GP|13489174|gb|AAK27808.1 putative peroxin {Oryza
sativa}, partial (39%)
Length = 658
Score = 285 bits (729), Expect(2) = 3e-82
Identities = 145/146 (99%), Positives = 146/146 (99%)
Frame = +2
Query: 34 SIGVLALRTPFLHKLLDYEHESFSLLMLVLEAHSLRTTDASFSESLYGLRRRPANIKLND 93
SIGVLALRTPFLHKLLDYEHESFSLLMLVLEAHSLRTTDASFSESLYGLRRRPANIKLND
Sbjct: 152 SIGVLALRTPFLHKLLDYEHESFSLLMLVLEAHSLRTTDASFSESLYGLRRRPANIKLND 331
Query: 94 NDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLHSIYNKEREARIQATIWGDENESYTFNA 153
NDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLHSIYNKEREARIQAT+WGDENESYTFNA
Sbjct: 332 NDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLHSIYNKEREARIQATLWGDENESYTFNA 511
Query: 154 RASVTTLITKRFQKIVGLCYPLLHAG 179
RASVTTLITKRFQKIVGLCYPLLHAG
Sbjct: 512 RASVTTLITKRFQKIVGLCYPLLHAG 589
Score = 69.3 bits (168), Expect = 2e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 1 MLFQVGGQGSRPTFFEMAAAEQLPRSLRAALTYSIGVLALRTPF 44
MLFQVGGQGSRPTFFEMAAAEQLPRSLRAALTY ++++ F
Sbjct: 52 MLFQVGGQGSRPTFFEMAAAEQLPRSLRAALTYLNRSISIKNTF 183
Score = 38.5 bits (88), Expect(2) = 3e-82
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 185 FAYQLLYLLDATGYYSL 201
FAYQLLYLLDATGYYSL
Sbjct: 607 FAYQLLYLLDATGYYSL 657
>BF004323 similar to GP|4337011|gb| zinc-binding peroxisomal integral
membrane protein {Arabidopsis thaliana}, partial (32%)
Length = 513
Score = 39.7 bits (91), Expect = 0.002
Identities = 18/53 (33%), Positives = 27/53 (49%)
Frame = -1
Query: 316 CPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQIRRLFH 368
C LCL R +P+ T G VFC+ CI ++ + CP P T + ++H
Sbjct: 255 CTLCLSNRQHPTA-TSCGHVFCWNCITEWCNEKPECPLCRTPITHSSLVCVYH 100
>TC87965 similar to GP|11994306|dbj|BAB01736.
emb|CAA66822.1~gene_id:MLJ15.12~unknown protein
{Arabidopsis thaliana}, partial (20%)
Length = 955
Score = 38.9 bits (89), Expect = 0.003
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Frame = +2
Query: 316 CPLCLQKRVNPSVMTVSGFVFCYACIFKFL---------TQYKRCPATMVPATVDQIRRL 366
CP+CL+ + P + T G +FC+ CI ++L ++KRCP V +V + L
Sbjct: 752 CPICLEHPLCPQI-TSCGHIFCFPCILQYLMLGEEDHKGDRWKRCPLCFVTISVKDLYTL 928
>TC86450 similar to GP|21537318|gb|AAM61659.1 unknown {Arabidopsis
thaliana}, partial (39%)
Length = 1268
Score = 38.5 bits (88), Expect = 0.004
Identities = 22/79 (27%), Positives = 34/79 (42%)
Frame = +3
Query: 289 TVYPPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQY 348
+V PP PP P CP+C+ V + T G +FC +CI ++
Sbjct: 696 SVKKPPEPPKEPVFT------------CPICMGPMVE-EMSTRCGHIFCKSCIKAAISAQ 836
Query: 349 KRCPATMVPATVDQIRRLF 367
+CP TV ++ R+F
Sbjct: 837 AKCPTCRKKITVKELIRVF 893
>TC86451 similar to GP|21537318|gb|AAM61659.1 unknown {Arabidopsis
thaliana}, partial (51%)
Length = 995
Score = 38.5 bits (88), Expect = 0.004
Identities = 22/79 (27%), Positives = 34/79 (42%)
Frame = +2
Query: 289 TVYPPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQY 348
+V PP PP P CP+C+ V + T G +FC +CI ++
Sbjct: 608 SVKKPPEPPKEPVFT------------CPICMGPMVE-EMSTRCGHIFCKSCIKAAISAQ 748
Query: 349 KRCPATMVPATVDQIRRLF 367
+CP TV ++ R+F
Sbjct: 749 AKCPTCRKKITVKELIRVF 805
>TC77900 similar to GP|9759182|dbj|BAB09797.1 ATP-dependent Clp protease
regulatory subunit CLPX {Arabidopsis thaliana}, partial
(61%)
Length = 2144
Score = 31.2 bits (69), Expect(2) = 0.015
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 278 YQSAEERMSAPTVYPPPPPPPPP 300
+QS E S PPPPPPPPP
Sbjct: 643 HQSFEFPESPELAAPPPPPPPPP 575
Score = 29.6 bits (65), Expect = 1.9
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 292 PPPPPPPPPKVA 303
PPPPPPPPP+ +
Sbjct: 598 PPPPPPPPPETS 563
Score = 24.3 bits (51), Expect(2) = 0.015
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 295 PPPPPPKVAKEGVQLPSDRTICP 317
PPPPPP E P TI P
Sbjct: 601 PPPPPPPPPPETS*FPGRTTIPP 533
>TC80104 similar to GP|20197699|gb|AAD20910.3 putative LRR receptor protein
kinase {Arabidopsis thaliana}, partial (28%)
Length = 1549
Score = 36.2 bits (82), Expect = 0.021
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Frame = +1
Query: 280 SAEERMSAPTVYPPPPPPPPPK--VAKEGV-------QLPSDRTICPLCLQKR---VNPS 327
S E S P PPPPPPPPP K+G+ LP+ R I R V+PS
Sbjct: 937 STPEVYSVPPPPPPPPPPPPPPSIPTKKGIVEPTTSHSLPTKRVIVEPTTSHRGTTVDPS 1116
Query: 328 VMTVSGFVFCYACIFKFLTQY 348
+ + S F L QY
Sbjct: 1117 LRSSSPPTFAKCFTIASLQQY 1179
>AJ497196 weakly similar to SP|O60683|PEXA_ Peroxisome assembly protein 10
(Peroxin-10). [Human] {Homo sapiens}, partial (11%)
Length = 582
Score = 35.8 bits (81), Expect = 0.027
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Frame = +1
Query: 240 QWIK---TLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPP 296
+W+K TLQG L T T+L Q L ++ K + + + S+ T
Sbjct: 97 RWLKDHSTLQGFQLLSTVTLL---QLMLYTSITIVKWAQTIPATMPKLRSSLTTGNELEE 267
Query: 297 PPPPKVAKEGVQLPSDRTI----CPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCP 352
PPK SD + C LCL+ R + T G VFC+ CI +L +CP
Sbjct: 268 DGPPK---------SDSVLTYYRCSLCLEARTQDTA-TPCGHVFCWTCISGWLQTRAQCP 417
>TC89939 similar to GP|15289911|dbj|BAB63606. hypothetical protein~similar
to Arabidopsis thaliana chromosome 1 F18O14.3, partial
(23%)
Length = 978
Score = 35.4 bits (80), Expect = 0.035
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 297 PPPPKVAKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFL---TQYKRCP 352
PP P + + C +C +P ++T+ G +FC+ C++K+L +Q + CP
Sbjct: 89 PPSPPYSSNNNNSDAGNFECNICFDLAQDP-IITLCGHLFCWPCLYKWLHFHSQSRECP 262
>TC82517 homologue to GP|7688065|emb|CAB89694.1 constitutively
photomorphogenic 1 protein {Pisum sativum}, partial
(22%)
Length = 671
Score = 34.3 bits (77), Expect = 0.079
Identities = 14/38 (36%), Positives = 20/38 (51%)
Frame = +3
Query: 315 ICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCP 352
+CP+C+Q + + +T G FCY CI L CP
Sbjct: 156 LCPICMQI-IKDAFLTSCGHSFCYMCIITHLRNKSDCP 266
>BG645859
Length = 745
Score = 27.7 bits (60), Expect(2) = 0.12
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = -3
Query: 277 WYQSAEERMSAPTVYPPPPPPPP 299
W A+ + T PPP PPPP
Sbjct: 224 WPPQAKHELPLSTKRPPPEPPPP 156
Score = 24.6 bits (52), Expect(2) = 0.12
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -3
Query: 293 PPPPPPPPKVAKEGVQLPSDRTICPLCL 320
PPP PPPP K + S P L
Sbjct: 179 PPPEPPPPNYEKLDKNVASITAATPALL 96
>TC86275 similar to PIR|E96603|E96603 unknown protein F14G9.26 [imported] -
Arabidopsis thaliana, partial (51%)
Length = 961
Score = 33.5 bits (75), Expect = 0.13
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 283 ERMSAPTVYPPPPPPPPPKVAKEGVQLPSDRTIC 316
++ + P PPPPPPPPP + G +IC
Sbjct: 603 KKKNPPDQLPPPPPPPPPSSSSRGGNPLPPSSIC 502
>BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (39%)
Length = 1358
Score = 33.5 bits (75), Expect = 0.13
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 280 SAEERMSAPTVYPPPPPPPPP 300
+A+ AP +PPPPPPPPP
Sbjct: 732 AAQHPSRAPRRHPPPPPPPPP 670
Score = 32.0 bits (71), Expect = 0.39
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 276 WWYQSAEERMSAPTVYPPPPPPPPPKVAKEGVQLPSDRTI 315
WW R S P+ Y PPP PPP V S TI
Sbjct: 624 WWAAPPGARPSRPSRYIPPPTSPPPASPPAPVPPQSPSTI 505
Score = 29.6 bits (65), Expect = 1.9
Identities = 11/16 (68%), Positives = 12/16 (74%)
Frame = -2
Query: 286 SAPTVYPPPPPPPPPK 301
SAP PPPPPPPP +
Sbjct: 175 SAPPRPPPPPPPPPQR 128
Score = 28.1 bits (61), Expect = 5.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 288 PTVYPPPPPPPPPKVA 303
P PPPPPPPP A
Sbjct: 223 PRASPPPPPPPPGPAA 176
Score = 27.7 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 15/28 (52%)
Frame = -3
Query: 280 SAEERMSAPTVYPPPPPPPPPKVAKEGV 307
SA + S PPPPPPPP + G+
Sbjct: 735 SAAQHPSRAPRRHPPPPPPPPPSSPPGM 652
Score = 27.7 bits (60), Expect = 7.4
Identities = 9/16 (56%), Positives = 12/16 (74%)
Frame = -1
Query: 286 SAPTVYPPPPPPPPPK 301
+ P + PP PPPPPP+
Sbjct: 701 ATPLLPPPRPPPPPPE 654
Score = 27.3 bits (59), Expect(2) = 1.1
Identities = 12/22 (54%), Positives = 13/22 (58%)
Frame = -3
Query: 279 QSAEERMSAPTVYPPPPPPPPP 300
Q+A R P PPPP PPPP
Sbjct: 237 QAACGRGHPPRHRPPPPGPPPP 172
Score = 24.3 bits (51), Expect(2) = 6.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 292 PPPPPPPPPKVAKEGVQLP 310
P PPPP PP+ + P
Sbjct: 548 PVPPPPSPPRAPPQSEAAP 492
Score = 21.9 bits (45), Expect(2) = 6.0
Identities = 9/22 (40%), Positives = 10/22 (44%)
Frame = -3
Query: 278 YQSAEERMSAPTVYPPPPPPPP 299
+ S R P PPPP PP
Sbjct: 723 HPSRAPRRHPPPPPPPPPSSPP 658
Score = 21.6 bits (44), Expect(2) = 1.1
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = -3
Query: 292 PPP----PPPPPPKVAKEGVQLPSDRTICP 317
PPP PPP PP+ P+ ++ P
Sbjct: 174 PPPLGPRPPPHPPRSGPPRPHPPTRTSLSP 85
>TC85758 homologue to GP|12248009|gb|AAG50096.1 IAA14 {Arabidopsis thaliana},
partial (82%)
Length = 1180
Score = 33.5 bits (75), Expect = 0.13
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -2
Query: 110 LSLLFLVVLPYLKSKLHSIY--NKEREARIQATIWGDENESYTFNARASV 157
LSLL LV YLK K SIY NK E + T+ + SY F+ R+++
Sbjct: 1059 LSLLLLVDYKYLKLKFESIYEQNKNSEDTSKLTLQSTGSASYIFSYRSTL 910
Score = 31.2 bits (69), Expect = 0.67
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 283 ERMSAPTVYPPPPPPPPP 300
E + T PPPPPPPPP
Sbjct: 267 EALGVSTSEPPPPPPPPP 214
Score = 28.9 bits (63), Expect = 3.3
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 292 PPPPPPPPP 300
PPPPPPPPP
Sbjct: 237 PPPPPPPPP 211
>BQ144079 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (12%)
Length = 1071
Score = 31.2 bits (69), Expect(2) = 0.15
Identities = 16/35 (45%), Positives = 18/35 (50%)
Frame = +1
Query: 292 PPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNP 326
PPPPP PPP VA+ P T P K+ NP
Sbjct: 622 PPPPPTPPPPVAQ-----PKSGTPPPSPYPKKPNP 711
Score = 30.0 bits (66), Expect = 1.5
Identities = 12/26 (46%), Positives = 13/26 (49%)
Frame = +2
Query: 288 PTVYPPPPPPPPPKVAKEGVQLPSDR 313
P YPPPPPP PP +P R
Sbjct: 740 P*PYPPPPPPKPPNTPLPPPPIPRKR 817
Score = 20.8 bits (42), Expect(2) = 0.15
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +3
Query: 279 QSAEERMSAPTVYPPPPPPP 298
Q+A+ P PP PP P
Sbjct: 528 QAADPPHPKPPTNPPKPPTP 587
>CA860408 GP|10728858|g CG10600 gene product {Drosophila melanogaster},
partial (0%)
Length = 451
Score = 33.1 bits (74), Expect = 0.18
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 270 FFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAKEGVQL 309
F + W S+ R S+ PPPPPPPP + V L
Sbjct: 122 FSSLSSLWSSSSISRHSSTRTSAPPPPPPPPFKPDQSVLL 241
>BQ137028 similar to GP|4914334|gb|A F14N23.20 {Arabidopsis thaliana},
partial (7%)
Length = 687
Score = 33.1 bits (74), Expect = 0.18
Identities = 15/29 (51%), Positives = 17/29 (57%), Gaps = 3/29 (10%)
Frame = +1
Query: 278 YQSAEERMSAPTV---YPPPPPPPPPKVA 303
Y + EE S P+ PPPPPPPPP A
Sbjct: 412 YHTKEEPQSPPSPPQPQPPPPPPPPPGAA 498
>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
granulovirus}, partial (42%)
Length = 909
Score = 33.1 bits (74), Expect = 0.18
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 279 QSAEERMSAPTVYPPPPPPPPPK 301
++ E++ + P PPPPPPPPP+
Sbjct: 103 RAPEKKKNPPRGQPPPPPPPPPQ 171
Score = 28.9 bits (63), Expect = 3.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 281 AEERMSAPTVYPPPPPPPPPKVA 303
A E+ P PPPPPPPP A
Sbjct: 106 APEKKKNPPRGQPPPPPPPPPQA 174
Score = 28.1 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 12/17 (69%)
Frame = +3
Query: 292 PPPPPPPPPKVAKEGVQ 308
PPPPP PPP+ + G Q
Sbjct: 408 PPPPPRPPPRHGRGGHQ 458
>CA917313 weakly similar to GP|10178016|dbj
gb|AAF24581.1~gene_id:MBK23.17~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (9%)
Length = 620
Score = 32.7 bits (73), Expect = 0.23
Identities = 20/59 (33%), Positives = 24/59 (39%)
Frame = +2
Query: 243 KTLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPK 301
KTL L + TYT+ QT WW+ S+ PPPP PPPK
Sbjct: 104 KTLCQPLANSTYTICQNEQT-------------WWHHSS-----------PPPPSPPPK 208
>TC88730 weakly similar to GP|21592748|gb|AAM64697.1 PRT1 {Arabidopsis
thaliana}, partial (28%)
Length = 802
Score = 32.7 bits (73), Expect = 0.23
Identities = 13/43 (30%), Positives = 22/43 (50%)
Frame = +2
Query: 315 ICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVP 357
+C +C Q +P V+ G V+C C++K + RC +P
Sbjct: 635 MCTMCKQLLFHPVVLHC-GHVYCETCVYKLADEMLRCQVCQIP 760
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.324 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,642,902
Number of Sequences: 36976
Number of extensions: 225325
Number of successful extensions: 11307
Number of sequences better than 10.0: 291
Number of HSP's better than 10.0 without gapping: 3552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7396
length of query: 370
length of database: 9,014,727
effective HSP length: 98
effective length of query: 272
effective length of database: 5,391,079
effective search space: 1466373488
effective search space used: 1466373488
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC137603.5