BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137546.15 + phase: 0 /pseudo
(355 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC82467 similar to GP|9758269|dbj|BAB08768.1 emb|CAA18192.1~gene... 231 3e-61
BF640516 similar to GP|17065312|gb Unknown protein {Arabidopsis ... 208 3e-54
AW775671 similar to GP|17065312|gb Unknown protein {Arabidopsis ... 146 1e-35
BQ137347 similar to GP|17065312|gb Unknown protein {Arabidopsis ... 137 5e-33
BF641303 similar to GP|9758269|dbj emb|CAA18192.1~gene_id:MBG8.1... 79 2e-26
BG644737 similar to GP|14596153|gb| Unknown protein {Arabidopsis... 54 9e-08
TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Gl... 41 8e-04
TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk p... 39 0.004
BF642399 similar to PIR|T10863|T10 extensin precursor - kidney b... 37 0.009
BF644693 homologue to GP|2598599|emb MtN4 {Medicago truncatula},... 37 0.009
TC76916 MtN4 37 0.015
TC76721 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum s... 36 0.020
BG648462 weakly similar to GP|14253163|em VMP4 protein {Volvox c... 36 0.026
TC76330 similar to GP|8132441|gb|AAF73291.1| extensin {Pisum sat... 35 0.058
TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean... 34 0.098
TC76717 similar to PIR|T10863|T10863 extensin precursor - kidney... 34 0.098
TC79079 similar to GP|19698893|gb|AAL91182.1 splicing factor pu... 34 0.098
BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like ... 34 0.098
BE324670 similar to PIR|T06782|T06 extensin - soybean, partial (... 33 0.17
BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 33 0.17
>TC82467 similar to GP|9758269|dbj|BAB08768.1
emb|CAA18192.1~gene_id:MBG8.16~similar to unknown
protein {Arabidopsis thaliana}, partial (75%)
Length = 1543
Score = 231 bits (589), Expect = 3e-61
Identities = 140/347 (40%), Positives = 185/347 (52%), Gaps = 14/347 (4%)
Frame = +3
Query: 22 RPTGKPNKN--PSKPKVD-----PQSHPALKFSNIPKQKLKPVNK---TPENVKISEDGV 71
RP G+ PS+P P ++ F PK + K NK P N+ + D
Sbjct: 39 RPAGECRNTCFPSRPVAFSANPFPMTYTTRHFHTSPKLQ-KTQNKFKQDPPNLPLKSD-- 209
Query: 72 SYVIEGAPFEFKYSYTET-PKSKPVQMREPP-FVPFGPVTMPRPWTGRPPLPPSKKKLKE 129
PF F YSY+ET P KP+ RE P F PFGP + R WTG
Sbjct: 210 ------LPFNFMYSYSETHPSIKPISFRESPKFSPFGPGRLDRKWTGTSA---------- 341
Query: 130 FDSFVLPPPHKKGVKPVQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINELVRSTLKS-- 187
PVQ R+ R VLG PL +E+ ELV S
Sbjct: 342 ---------------PVQHQVD-----RNRFEEDRNRVLGAPLEDQEVAELVERYRHSDC 461
Query: 188 SRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYRR 247
SRQ+NLG+ G HN LD+IH HWK+ +IKC+GV T+DMDN+C LE+K+GGK+IYR
Sbjct: 462 SRQINLGKGGVTHNTLDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRN 641
Query: 248 GGVIYLFRGRNYNHKTRPRFPLMLWKPVPPVYPRLIQQVPEGLTLEEATEMRQKGRTLTP 307
++ L+RGR+Y+ RP PLMLWKP P+YP+L++ V EGLT E+ E+R G P
Sbjct: 642 MNILILYRGRHYDPNNRPVIPLMLWKPYAPIYPKLVKNVIEGLTHEKTKELRNMGLNSHP 821
Query: 308 ICKLGKNGVYYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGAKLR 354
+ KL +NGVY N+ V+EA + E+VR++C + SD +KIG KLR
Sbjct: 822 LMKLTRNGVYVNVGERVKEALKTEEVVRLDCTHVGTSDCKKIGVKLR 962
>BF640516 similar to GP|17065312|gb Unknown protein {Arabidopsis thaliana},
partial (30%)
Length = 659
Score = 208 bits (529), Expect = 3e-54
Identities = 106/199 (53%), Positives = 130/199 (65%), Gaps = 7/199 (3%)
Frame = +3
Query: 27 PNKNPSKPKVDPQSHPALKFSNIPKQKLKPV-------NKTPENVKISEDGVSYVIEGAP 79
P S P P +PALK K KP+ + +V I E GVSY++ GAP
Sbjct: 42 PPPRKSHPPPPPNPNPALKHHRNSKY-YKPITHPTTIPSSDDRSVIIGESGVSYLLPGAP 218
Query: 80 FEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPH 139
FEF++SY+ETPK KP+ +REP F+PF P TMPRPWTG+ PL SKK + FDSF PP
Sbjct: 219 FEFQFSYSETPKVKPIAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPEG 398
Query: 140 KKGVKPVQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINELVRSTLKSSRQLNLGRDGFI 199
KGVK V+ PGPF G P +SREE+LGEPL K E+ LV+ + +RQ+NLGRDG
Sbjct: 399 MKGVKKVEMPGPFPVGKFPEEGVSREEILGEPLKKWEVQMLVKPMMADNRQVNLGRDGLT 578
Query: 200 HNMLDNIHAHWKRRRVCKI 218
HNML+ IH+HWKRRRVCKI
Sbjct: 579 HNMLELIHSHWKRRRVCKI 635
>AW775671 similar to GP|17065312|gb Unknown protein {Arabidopsis thaliana},
partial (22%)
Length = 624
Score = 146 bits (369), Expect = 1e-35
Identities = 64/103 (62%), Positives = 84/103 (81%)
Frame = +2
Query: 252 YLFRGRNYNHKTRPRFPLMLWKPVPPVYPRLIQQVPEGLTLEEATEMRQKGRTLTPICKL 311
YLFRGRNYN++TRP++P+MLW PVYP+L+Q PEGLT EA E+R KG++L PICKL
Sbjct: 2 YLFRGRNYNYRTRPQYPVMLWNSAAPVYPKLMQDAPEGLTKAEADELRMKGKSLLPICKL 181
Query: 312 GKNGVYYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGAKLR 354
KNGVY LV +VR+AFE LV+++C+GL+ SDY+K+GAKL+
Sbjct: 182 AKNGVYTTLVKDVRDAFEGSHLVKIDCKGLDPSDYKKLGAKLK 310
>BQ137347 similar to GP|17065312|gb Unknown protein {Arabidopsis thaliana},
partial (18%)
Length = 882
Score = 137 bits (346), Expect = 5e-33
Identities = 66/117 (56%), Positives = 81/117 (68%)
Frame = +1
Query: 109 TMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGPFLPGTSPRYVMSREEVL 168
TMPRPWTG+ PL SKK + FDSF PP KGVK V+ PGPF G P +SREE+L
Sbjct: 10 TMPRPWTGKAPLKKSKKNIPLFDSFNPPPEGMKGVKKVEMPGPFPVGKFPEEGVSREEIL 189
Query: 169 GEPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCT 225
GEPL K E+ LV+ + +RQ+NLGRDG HNML+ IH+HWKRR +C+I G+ T
Sbjct: 190 GEPLKKWEVQMLVKPMMADNRQVNLGRDGLTHNMLELIHSHWKRRHICQILYQGLPT 360
>BF641303 similar to GP|9758269|dbj emb|CAA18192.1~gene_id:MBG8.16~similar to
unknown protein {Arabidopsis thaliana}, partial (39%)
Length = 681
Score = 78.6 bits (192), Expect(2) = 2e-26
Identities = 32/53 (60%), Positives = 41/53 (76%)
Frame = +2
Query: 194 GRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYR 246
GR G HN LD+IH HWK+ +IKC+GV T+DMDN+C LE+K+GGK+IYR
Sbjct: 521 GRGGVTHNTLDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYR 679
Score = 58.2 bits (139), Expect(2) = 2e-26
Identities = 54/156 (34%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
Frame = +1
Query: 46 FSNIPKQKLKPVNK---TPENVKISEDGVSYVIEGAPFEFKYSYTET-PKSKPVQMREPP 101
FS+ PK + K NK P N+ + D PF F YSY+ET P KP+ RE P
Sbjct: 115 FSHSPKLQ-KTQNKFKQDPPNLPLKSD--------LPFNFMYSYSETHPSIKPISFRESP 267
Query: 102 -FVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGPFLPGTSPRY 160
F PFGP + R WTG PVQ R+
Sbjct: 268 KFSPFGPGRLDRKWTGTSA-------------------------PVQHQVD-----RNRF 357
Query: 161 VMSREEVLGEPLTKEEINELVRSTLKS--SRQLNLG 194
R VLG PL +E+ ELV S SRQ+NLG
Sbjct: 358 EEDRNRVLGAPLEDQEVAELVERYRHSDCSRQINLG 465
>BG644737 similar to GP|14596153|gb| Unknown protein {Arabidopsis thaliana},
partial (19%)
Length = 471
Score = 53.9 bits (128), Expect = 9e-08
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = -1
Query: 50 PKQKLKPVNKTPENVKISEDGVSYVIEGAPFEFKYSYTET-PKSKPVQMREPPFVPFGPV 108
PK++ KP + P + + G + PF+F++SYTE+ P +P+ +REP + PFGP
Sbjct: 282 PKKQPKPRYRPPSS--LDRTGEKPLQSKLPFDFRFSYTESSPDVRPIGLREPKYSPFGPG 109
Query: 109 TMPRPWTG 116
+ R WTG
Sbjct: 108 KLDRVWTG 85
>TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Glycine max},
partial (70%)
Length = 738
Score = 40.8 bits (94), Expect = 8e-04
Identities = 36/123 (29%), Positives = 48/123 (38%)
Frame = +1
Query: 36 VDPQSHPALKFSNIPKQKLKPVNKTPENVKISEDGVSYVIEGAPFEFKYSYTETPKSKPV 95
V+P P K PK+ +KP K PE K E + P + K KP
Sbjct: 274 VEPPPPPKPKEPEKPKEPVKP--KEPEKPKEPEKPKNPEKPKEPEKPKEPEKPKEPEKPK 447
Query: 96 QMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGPFLPG 155
+ +P P P P+P PP P K K K PPP +P+ P P++P
Sbjct: 448 EPEKPKEKPAPPPPEPKP---EPPKQPEKPKEKP-----APPP-----QPMPEPAPYIPV 588
Query: 156 TSP 158
P
Sbjct: 589 CPP 597
>TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk protein
{Argiope trifasciata}, partial (3%)
Length = 1177
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/161 (23%), Positives = 54/161 (32%), Gaps = 16/161 (9%)
Frame = +3
Query: 7 TTFPISASNADQSSRRPTGKPNKNPSKPKVDPQSHPALKFSNIPKQKL------------ 54
+T P AS S PT + PS P+ +S P+ S P+ K
Sbjct: 18 STSPSYASRTPLRSTPPTRPSSPTPSAPRTSSRSTPSTSPSRRPRSKTPLPPPPPPLPQH 197
Query: 55 -KPVNKTPENVKISEDGVSYVIEGAPFEFKYS---YTETPKSKPVQMREPPFVPFGPVTM 110
KP K+P ++ S+ S + + + TP+ P P P P+
Sbjct: 198 PKPPQKSPPRMRRSKPSPSSPAATPLWPQRTTPPPSPSTPRPSP*TPATPSTSPTAPLPT 377
Query: 111 PRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGP 151
P P T PP + P P P PGP
Sbjct: 378 PPPRTTLPPA-------------LTPRPPSPSTPPTPKPGP 461
>BF642399 similar to PIR|T10863|T10 extensin precursor - kidney bean, partial
(33%)
Length = 653
Score = 37.4 bits (85), Expect = 0.009
Identities = 41/145 (28%), Positives = 53/145 (36%), Gaps = 5/145 (3%)
Frame = +3
Query: 12 SASNADQSSRRPTGKPNKNPSKPKVDPQSHPALKFSNIPKQKLKPVNKTPENVKISEDGV 71
SA++ SS P KP S P P +S+ P P K P V
Sbjct: 81 SANSYIYSSPPPPPKPYYYHSPPPPVHSPPPPYHYSSPP-----PPPKKPYKYASPPPPV 245
Query: 72 SYVIEGAPFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRP-WTGRPPLPPSKKKLKEF 130
P +KY P KP + PP + + P P + + P PP KK K
Sbjct: 246 YKYKSPPPPVYKYKSPPPPPKKPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPPKKPYK-- 419
Query: 131 DSFVLPPP----HKKGVKPVQSPGP 151
+ PPP +K PV SP P
Sbjct: 420 --YPSPPPPVYKYKSPPPPVYSPPP 488
>BF644693 homologue to GP|2598599|emb MtN4 {Medicago truncatula}, partial
(79%)
Length = 621
Score = 37.4 bits (85), Expect = 0.009
Identities = 22/62 (35%), Positives = 30/62 (47%)
Frame = +2
Query: 93 KPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGPF 152
KP ++ PP+VP PV P P+ +PP+ P V PPH V SP P+
Sbjct: 17 KPPVVKPPPYVPKPPVVRP-PYVPKPPVVPVTPPYVPKPPIVF-PPHVPLPPVVPSPPPY 190
Query: 153 LP 154
+P
Sbjct: 191 VP 196
Score = 32.7 bits (73), Expect = 0.22
Identities = 26/85 (30%), Positives = 35/85 (40%), Gaps = 2/85 (2%)
Frame = +2
Query: 90 PKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKG--VKPVQ 147
P +P + +PP VP P +P+P PP P + +V PP K V P
Sbjct: 59 PVVRPPYVPKPPVVPVTPPYVPKPPIVFPPHVPLPPVVPSPPPYVPTPPIVKPPIVFPPH 238
Query: 148 SPGPFLPGTSPRYVMSREEVLGEPL 172
P P + +P YV V PL
Sbjct: 239 VPLPPVVPVTPPYVQPPPIVTPPPL 313
>TC76916 MtN4
Length = 1850
Score = 36.6 bits (83), Expect = 0.015
Identities = 40/141 (28%), Positives = 55/141 (38%), Gaps = 3/141 (2%)
Frame = +1
Query: 24 TGKPNKNPSKPKVDPQSHPALKFSNIPKQKL-KPVNKTPENVKISEDGVSYVIEGAPFEF 82
T KP +P P V P P +PK + KP P V V++ P+
Sbjct: 661 TPKPPHHPKPPAVHPPHVPKPHPPYVPKPPIVKPPIVHPPYVPKPP-----VVKPPPYVP 825
Query: 83 KYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKG 142
K P +P + +PP VP P +P+P PP P + +V PP K
Sbjct: 826 K-----PPVVRPPYVPKPPVVPVTPPYVPKPPIVFPPHVPLPPVVPSPPPYVPTPPIVKP 990
Query: 143 --VKPVQSPGPFLPGTSPRYV 161
V P P P + +P YV
Sbjct: 991 PIVFPPHVPLPPVVPVTPPYV 1053
Score = 35.8 bits (81), Expect = 0.026
Identities = 37/142 (26%), Positives = 50/142 (35%), Gaps = 10/142 (7%)
Frame = +1
Query: 23 PTGKPNKNPSKPKVDPQSHPALKFSNIPKQKLKPVNKTPENVKISEDGVSYVIEGAPFEF 82
P KP K+ PK P P K P + K +V + P
Sbjct: 559 PVHKPPKHSPTPKPPVHKPPRYPPKPSPCPPPSSTPKPPHHPKPPAVHPPHVPKPHP--- 729
Query: 83 KYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPL--PP--SKKKLKEFDSFVLP-- 136
Y P + PP+VP PV P P+ +PP+ PP K + +P
Sbjct: 730 --PYVPKPPIVKPPIVHPPYVPKPPVVKPPPYVPKPPVVRPPYVPKPPVVPVTPPYVPKP 903
Query: 137 ----PPHKKGVKPVQSPGPFLP 154
PPH V SP P++P
Sbjct: 904 PIVFPPHVPLPPVVPSPPPYVP 969
Score = 29.3 bits (64), Expect = 2.4
Identities = 37/132 (28%), Positives = 45/132 (34%)
Frame = +1
Query: 23 PTGKPNKNPSKPKVDPQSHPALKFSNIPKQKLKPVNKTPENVKISEDGVSYVIEGAPFEF 82
P+ KP + P V P H K S PK PV+K P +
Sbjct: 514 PSPKPPSH-HPPIVKPPVHKPPKHSPTPKP---PVHKPPR-----------------YPP 630
Query: 83 KYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKG 142
K S P S P P P +P+P P PP K V PP K
Sbjct: 631 KPSPCPPPSSTPKPPHHPKPPAVHPPHVPKPHPPYVPKPPIVK-----PPIVHPPYVPK- 792
Query: 143 VKPVQSPGPFLP 154
PV P P++P
Sbjct: 793 -PPVVKPPPYVP 825
Score = 28.5 bits (62), Expect = 4.1
Identities = 22/78 (28%), Positives = 28/78 (35%)
Frame = +1
Query: 84 YSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGV 143
Y + P P ++ P P P+P +PP P K S PPH
Sbjct: 511 YPSPKPPSHHPPIVKPPVHKPPKHSPTPKPPVHKPPRYPPKPSPCPPPSSTPKPPHHP-- 684
Query: 144 KPVQSPGPFLPGTSPRYV 161
KP P +P P YV
Sbjct: 685 KPPAVHPPHVPKPHPPYV 738
>TC76721 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum sativum},
partial (46%)
Length = 674
Score = 36.2 bits (82), Expect = 0.020
Identities = 41/144 (28%), Positives = 48/144 (32%), Gaps = 3/144 (2%)
Frame = +1
Query: 23 PTGKPNKNPSKPKVDPQSHPALKFSNIPKQKLKPVNKTPENVKISEDGVSYVIEGAPFEF 82
P KP K PS P P K+ + P K + P K P +
Sbjct: 145 PPKKPYKYPSPPP------PVYKYKSPPPPVYKYKSPPPPVYKYKSP--------PPPVY 282
Query: 83 KYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPH--- 139
KY P KP + PP P P P PP P K K + PPPH
Sbjct: 283 KYKSPPPPPKKPYKYPSPP-PPVYKYKSPPPPVYSPP-PVYKYKSPPPPVYSPPPPHYVY 456
Query: 140 KKGVKPVQSPGPFLPGTSPRYVMS 163
PV SP P P Y+ S
Sbjct: 457 SSPPPPVYSPPP------PHYIYS 510
>BG648462 weakly similar to GP|14253163|em VMP4 protein {Volvox carteri f.
nagariensis}, partial (4%)
Length = 678
Score = 35.8 bits (81), Expect = 0.026
Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Frame = +1
Query: 89 TPKSKPVQMREPPFVPFGPVTMPRPWTGRPPL---PPSKKKLKEFDSFVLPPPHKKGVKP 145
TP Q P VP ++P P PP PPS+ L E ++PPP G P
Sbjct: 376 TPMQPYNQQIPPSIVPPPLSSLPPPQPEMPPPHPHPPSQPPLPETQPPLVPPPPPPGSPP 555
Query: 146 VQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINELVRS 183
P P LP P V E G+PL + L +S
Sbjct: 556 --PPSPPLPVQEPVSV----ECSGQPLQYQWQGNLCKS 651
>TC76330 similar to GP|8132441|gb|AAF73291.1| extensin {Pisum sativum},
partial (72%)
Length = 1082
Score = 34.7 bits (78), Expect = 0.058
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Frame = +3
Query: 86 YTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPP----HKK 141
Y ++P P + PP + + P P+ P PP KK K + PPP +K
Sbjct: 21 YYKSPPPPPYKYSSPPPPVYKYKSPPPPYKYSSPPPPPKKPYK----YPSPPPPVYKYKS 188
Query: 142 GVKPVQSPGPFLPGTSP 158
PV SP P SP
Sbjct: 189 PPPPVYSPPPIYKYKSP 239
Score = 32.3 bits (72), Expect = 0.29
Identities = 27/82 (32%), Positives = 32/82 (38%), Gaps = 3/82 (3%)
Frame = +3
Query: 73 YVIEGAPFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDS 132
Y + P +KYS P KP + PP P P P PP P K K
Sbjct: 78 YKYKSPPPPYKYSSPPPPPKKPYKYPSPP-PPVYKYKSPPPPVYSPP-PIYKYKSPPPPV 251
Query: 133 FVLPPP---HKKGVKPVQSPGP 151
+ PPP +K PV SP P
Sbjct: 252 YSPPPPVYKYKSPPPPVYSPPP 317
>TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean, partial
(93%)
Length = 1554
Score = 33.9 bits (76), Expect = 0.098
Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Frame = -2
Query: 74 VIEGAPFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGR------PPLPPSKKKL 127
V+ P + T PKS PV P P +P P + P LPP
Sbjct: 773 VVASPPITSQPPVTVAPKSAPVTSPAPKIAPASSPKVPPPQPPKSSPVSTPTLPPP---- 606
Query: 128 KEFDSFVLPPPHKKGVKPVQSP 149
LPPP K PVQ+P
Sbjct: 605 -------LPPPPKISPTPVQTP 561
>TC76717 similar to PIR|T10863|T10863 extensin precursor - kidney bean,
partial (56%)
Length = 928
Score = 33.9 bits (76), Expect = 0.098
Identities = 39/145 (26%), Positives = 46/145 (30%), Gaps = 9/145 (6%)
Frame = +2
Query: 23 PTGKPNKNPSKP----KVDPQSHPALKFSNIPKQKLKPVNKTPENVKISEDGVSYVIEGA 78
P KP K PS P K P K+ + P K + P K
Sbjct: 242 PPKKPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP--------P 397
Query: 79 PFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVL--- 135
P +KY P KP + PP + + P P PP K K V
Sbjct: 398 PPVYKYKSPPPPPKKPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYK 577
Query: 136 --PPPHKKGVKPVQSPGPFLPGTSP 158
PPP KK K P P SP
Sbjct: 578 SPPPPPKKPYKYPSPPPPVYKYKSP 652
Score = 33.5 bits (75), Expect = 0.13
Identities = 38/141 (26%), Positives = 45/141 (30%), Gaps = 5/141 (3%)
Frame = +2
Query: 23 PTGKPNKNPSKPKVDPQSHPALKFSNIPKQKLKPVNKTPENVKISEDGVSYVIEGAPFEF 82
P KP K PS P P K+ + P K + P K P +
Sbjct: 431 PPKKPYKYPSPPP------PVYKYKSPPPPVYKYKSPPPPVYKYKSP--------PPPVY 568
Query: 83 KYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVL-----PP 137
KY P KP + PP + + P P PP K K V PP
Sbjct: 569 KYKSPPPPPKKPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSPPP 748
Query: 138 PHKKGVKPVQSPGPFLPGTSP 158
P KK K P P SP
Sbjct: 749 PPKKPYKYPSPPPPVYKYKSP 811
Score = 32.3 bits (72), Expect = 0.29
Identities = 36/130 (27%), Positives = 44/130 (33%)
Frame = +2
Query: 23 PTGKPNKNPSKPKVDPQSHPALKFSNIPKQKLKPVNKTPENVKISEDGVSYVIEGAPFEF 82
P KP K PS P P K+ + P K + P K P +
Sbjct: 590 PPKKPYKYPSPPP------PVYKYKSPPPPVYKYKSPPPPVYKYKSP--------PPPVY 727
Query: 83 KYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKG 142
KY P KP + PP P P P PP P K K + PPP+K
Sbjct: 728 KYKSPPPPPKKPYKYPSPP-PPVYKYKSPPPPVYSPP-PVYKYKSPPPPVYSPPPPYKYK 901
Query: 143 VKPVQSPGPF 152
P P P+
Sbjct: 902 SPP---PPPY 922
Score = 27.7 bits (60), Expect = 7.0
Identities = 22/71 (30%), Positives = 30/71 (41%), Gaps = 1/71 (1%)
Frame = +2
Query: 82 FKYSYTETPKSKPVQMREPPFVPFGPVTMPRP-WTGRPPLPPSKKKLKEFDSFVLPPPHK 140
+ YS P KP + PP + + P P + + P PP KK K + PPP
Sbjct: 119 YHYSSPPPPPKKPYKYASPPPPVYKYKSPPPPVYKYKSPPPPPKKPYK----YPSPPP-- 280
Query: 141 KGVKPVQSPGP 151
V +SP P
Sbjct: 281 -PVYKYKSPPP 310
>TC79079 similar to GP|19698893|gb|AAL91182.1 splicing factor putative
{Arabidopsis thaliana}, partial (17%)
Length = 1114
Score = 33.9 bits (76), Expect = 0.098
Identities = 39/142 (27%), Positives = 57/142 (39%), Gaps = 13/142 (9%)
Frame = +1
Query: 79 PFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLP--PSKKKLKEFDSFVLP 136
P Y+ P S + M PP P G P P PPLP P K+ K DS ++P
Sbjct: 262 PVPRPYAPHPHPSSGMMPMMHPPPPPQGVPPPPPPEEAPPPLPEEPEPKRQKHDDSALIP 441
Query: 137 PPHKKGVKPVQSPGPFLPGTSPRYVMSREEVLGEPL--TKEEINELVRS---------TL 185
+ Q PGP S V + G+ L T + ++E V S L
Sbjct: 442 ----EDKFLAQHPGPARISISVPNV-DEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQL 606
Query: 186 KSSRQLNLGRDGFIHNMLDNIH 207
+++Q G+ GF+ + + H
Sbjct: 607 PANKQKLSGKPGFLKDNMSLAH 672
>BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like protein
(clone pMG14) - common tobacco (fragment), partial (11%)
Length = 632
Score = 33.9 bits (76), Expect = 0.098
Identities = 39/134 (29%), Positives = 53/134 (39%), Gaps = 9/134 (6%)
Frame = +1
Query: 3 LKLATTFPISASNADQSSRRPTGKPNKNPSKPKVDPQS--HPALKFSN---IPKQKLKPV 57
L L ++ P ++ + R PT P S P P S P+ FS P + P
Sbjct: 178 LSLPSSPPSTSPSPHALLRSPTAPPAAPLSPPASSPSSPTRPSSLFSPPPPSPSRSRPPP 357
Query: 58 NKTPENVKISEDGVSYVIEGAPFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWT-G 116
TP + + + E +PF S P S P PP + F P P PW+
Sbjct: 358 PSTPSPL-LPLPLLPLATEPSPFP-PSSPPPRPASSP--SLSPPVLLFPPSASPPPWSPS 525
Query: 117 RPP---LPPSKKKL 127
RPP PPS+ L
Sbjct: 526 RPPSALAPPSRPSL 567
>BE324670 similar to PIR|T06782|T06 extensin - soybean, partial (27%)
Length = 397
Score = 33.1 bits (74), Expect = 0.17
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +2
Query: 79 PFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRP-WTGRPPLPPSKKKLKEFDSFVLPP 137
P +KY P KP + PP + + P P + + P PP KK K + PP
Sbjct: 89 PPVYKYKSPPPPPKKPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPPKKPYK----YPSPP 256
Query: 138 P----HKKGVKPVQSPGP 151
P +K PV SP P
Sbjct: 257 PPVYKYKSPPPPVYSPPP 310
>BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (39%)
Length = 1358
Score = 33.1 bits (74), Expect = 0.17
Identities = 21/66 (31%), Positives = 26/66 (38%), Gaps = 2/66 (3%)
Frame = -3
Query: 90 PKSKPVQMREPPFVPFGPVTMPRPWTGRPPL--PPSKKKLKEFDSFVLPPPHKKGVKPVQ 147
P+ +P PP P GP P P PP PP++ L PPP P
Sbjct: 210 PRHRPPPPGPPPPPPLGPRPPPHPPRSGPPRPHPPTRTSLSP------PPPPPAASPPPP 49
Query: 148 SPGPFL 153
+P P L
Sbjct: 48 APPPLL 31
Score = 32.7 bits (73), Expect = 0.22
Identities = 37/147 (25%), Positives = 56/147 (37%), Gaps = 10/147 (6%)
Frame = -1
Query: 22 RPTGKPNKNPSKPKVDPQSH-----PALKFSNIPKQKLKPVNKTPE--NVKISEDGVSYV 74
RP PS P+ PQS P P+ L+P + + + GV+ V
Sbjct: 560 RPPPPVPPPPSPPRAPPQSEAAPPPPPPPRGARPRAPLRPPSAPDPAGHPRAPRQGVAVV 381
Query: 75 IEGAPFEFKYSYTETPKSKPVQMREPPF-VPFGPVTMPRPWTGRPPL--PPSKKKLKEFD 131
+ P+ +P+ PP P P P P G PL PP+ + +
Sbjct: 380 PGPRSGNSPRAAHRGPEPRPLPRPPPPTRPPAAPGPGPPPAPGPTPLSKPPAAEGIPPAT 201
Query: 132 SFVLPPPHKKGVKPVQSPGPFLPGTSP 158
+ PPP + ++P +P P P T P
Sbjct: 200 A---PPPRARRLRPPSAPAP--PPTPP 135
Score = 29.3 bits (64), Expect = 2.4
Identities = 37/150 (24%), Positives = 47/150 (30%), Gaps = 22/150 (14%)
Frame = -2
Query: 22 RPTGKPNKNPSKPKVDPQSHPALKFSNIPKQKLKPVNKTP-------ENVKISEDGVSYV 74
RP P P+ P P S P P + PV +P E + GV
Sbjct: 502 RPRPPPRPPPAAPARAPPSGPPAP-PTPPATRAPPVRASPWCPGQGQETPQGRHTGVQSP 326
Query: 75 IE--------GAPFEFKYSYTETPKSKPVQMR-------EPPFVPFGPVTMPRPWTGRPP 119
+ G P + P P+ R PP P GP P PP
Sbjct: 325 VPCPALPHPPGPPPPLDRAPPPPPAPLPLASRLRPRASPPPPPPPPGPAASAPPRPPPPP 146
Query: 120 LPPSKKKLKEFDSFVLPPPHKKGVKPVQSP 149
PP ++ PPPH +P SP
Sbjct: 145 PPPPQRPPPP------PPPHTHQPEPPTSP 74
Score = 28.9 bits (63), Expect = 3.2
Identities = 20/63 (31%), Positives = 29/63 (45%), Gaps = 4/63 (6%)
Frame = -1
Query: 100 PPFVPFGPV-TMPRPWTGRPPLPPSKKKLK---EFDSFVLPPPHKKGVKPVQSPGPFLPG 155
P VP V T PRP PP+PP + + ++ PPP +G +P P P
Sbjct: 608 PALVPLVRVATYPRPPRPPPPVPPPPSPPRAPPQSEAAPPPPPPPRGARP---RAPLRPP 438
Query: 156 TSP 158
++P
Sbjct: 437 SAP 429
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,820,753
Number of Sequences: 36976
Number of extensions: 205416
Number of successful extensions: 1973
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of query: 355
length of database: 9,014,727
effective HSP length: 97
effective length of query: 258
effective length of database: 5,428,055
effective search space: 1400438190
effective search space used: 1400438190
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC137546.15