TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136953.9 - phase: 0 
         (567 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC85923 similar to SP|Q42876|AMP2_LYCES Aminopeptidase 2  chloro...  1085  0.0
BE316853 homologue to GP|15983519|gb AT4g30920/F6I18_170 {Arabid...   206  2e-53
BQ140913 similar to SP|Q42876|AMP2_ Aminopeptidase 2  chloroplas...   169  3e-42
TC88896 weakly similar to GP|6728968|gb|AAF26966.1| unknown prot...    31  1.1
TC77841 weakly similar to GP|9294387|dbj|BAB02397.1 cytochrome P...    29  4.2
BQ144266 similar to GP|19887436|gb| Fe-S oxidoreductase family p...    29  5.6

>TC85923 similar to SP|Q42876|AMP2_LYCES Aminopeptidase 2  chloroplast
           precursor (EC 3.4.11.1) (Leucine aminopeptidase) (LAP),
           partial (89%)
          Length = 1930

 Score = 1085 bits (2805), Expect = 0.0
 Identities = 562/563 (99%), Positives = 562/563 (99%)
 Frame = +2

Query: 5   ASAIVIAFSKSSSSSLFLTSRIRFASFPKRSFHSTTKLMSQSRYTTLGLTHPTNIEAPKI 64
           ASAIVIAFSKSSSSSLFLTSRIRFASFPKRSFHSTTKLMSQSRYTTLGLTHPTNIEAPKI
Sbjct: 2   ASAIVIAFSKSSSSSLFLTSRIRFASFPKRSFHSTTKLMSQSRYTTLGLTHPTNIEAPKI 181

Query: 65  SFSATDVDVTEWKGDILAVGVTEKDLTRDAKSRFENSILNKIDLKLDGLLSEASSEEDFS 124
           SFSATDVDVTEWKGDILAVGVTEKDLTRDAKSRFENSILNKIDLKLDGLLSEASSEEDFS
Sbjct: 182 SFSATDVDVTEWKGDILAVGVTEKDLTRDAKSRFENSILNKIDLKLDGLLSEASSEEDFS 361

Query: 125 GKVGQSTVVRIKGLGSKRVGLIGLGQLPSTTALYKGLGEAVVAVAKSAQASNVAIVLASS 184
           GKVGQSTVVRIKGLGSKRVGLIGLGQLPSTTALYKGLGEAVVAVAKSAQASNVAIVLASS
Sbjct: 362 GKVGQSTVVRIKGLGSKRVGLIGLGQLPSTTALYKGLGEAVVAVAKSAQASNVAIVLASS 541

Query: 185 EGLSSESKLSTAYAIASGAVLGLFEDQRYKSESKKPAVRSIDIIGLGTGPDLEKKLKYAG 244
           EGLSSESKLSTAYAIASGAVLGLFEDQRYKSESKKPAVRSIDIIGLGTGPDLEKKLKYAG
Sbjct: 542 EGLSSESKLSTAYAIASGAVLGLFEDQRYKSESKKPAVRSIDIIGLGTGPDLEKKLKYAG 721

Query: 245 DVSFGIIFGRELVNSPANVLTPGVLAEEASKVASTYSDVFTAKILDADQCKELKMGSYLG 304
           DVS GIIFGRELVNSPANVLTPGVLAEEASKVASTYSDVFTAKILDADQCKELKMGSYLG
Sbjct: 722 DVSSGIIFGRELVNSPANVLTPGVLAEEASKVASTYSDVFTAKILDADQCKELKMGSYLG 901

Query: 305 VAAASANPPRFIHLTYKPPSGSVKVKLALVGKGLTFDSGGYNIKTGPGCSIELMKFDMGG 364
           VAAASANPPRFIHLTYKPPSGSVKVKLALVGKGLTFDSGGYNIKTGPGCSIELMKFDMGG
Sbjct: 902 VAAASANPPRFIHLTYKPPSGSVKVKLALVGKGLTFDSGGYNIKTGPGCSIELMKFDMGG 1081

Query: 365 SAAVLGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDVVTASNGKTIEVNNTDAEG 424
           SAAVLGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDVVTASNGKTIEVNNTDAEG
Sbjct: 1082SAAVLGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDVVTASNGKTIEVNNTDAEG 1261

Query: 425 RLTLADALVYACNQGVEKIIDLATLTGACVVALGPSIAGVFSPNDELVKEVLEASEVSGE 484
           RLTLADALVYACNQGVEKIIDLATLTGACVVALGPSIAGVFSPNDELVKEVLEASEVSGE
Sbjct: 1262RLTLADALVYACNQGVEKIIDLATLTGACVVALGPSIAGVFSPNDELVKEVLEASEVSGE 1441

Query: 485 KLWRLPIEESYWESMKSGVADMVNTGGRPGGSITAALFLKQFVDEKVQWLHIDMAGPVWN 544
           KLWRLPIEESYWESMKSGVADMVNTGGRPGGSITAALFLKQFVDEKVQWLHIDMAGPVWN
Sbjct: 1442KLWRLPIEESYWESMKSGVADMVNTGGRPGGSITAALFLKQFVDEKVQWLHIDMAGPVWN 1621

Query: 545 DKKRSATGFGVSTLVEWVLKNSS 567
           DKKRSATGFGVSTLVEWVLKNSS
Sbjct: 1622DKKRSATGFGVSTLVEWVLKNSS 1690


>BE316853 homologue to GP|15983519|gb AT4g30920/F6I18_170 {Arabidopsis
           thaliana}, partial (18%)
          Length = 324

 Score =  206 bits (524), Expect = 2e-53
 Identities = 100/107 (93%), Positives = 104/107 (96%)
 Frame = +2

Query: 348 KTGPGCSIELMKFDMGGSAAVLGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDVV 407
           KTGPGC IELMKFDMGGSAAV GAAKA+GQIKPLGVEVHFIVAACENMISGTGMRPGD+V
Sbjct: 2   KTGPGCMIELMKFDMGGSAAVFGAAKAIGQIKPLGVEVHFIVAACENMISGTGMRPGDIV 181

Query: 408 TASNGKTIEVNNTDAEGRLTLADALVYACNQGVEKIIDLATLTGACV 454
           TASNGKTIEVNNTDAEGRLTLADALVY CNQGV+KIIDLATLTGAC+
Sbjct: 182 TASNGKTIEVNNTDAEGRLTLADALVYTCNQGVDKIIDLATLTGACI 322


>BQ140913 similar to SP|Q42876|AMP2_ Aminopeptidase 2  chloroplast precursor
           (EC 3.4.11.1) (Leucine aminopeptidase) (LAP), partial
           (10%)
          Length = 642

 Score =  169 bits (428), Expect = 3e-42
 Identities = 103/195 (52%), Positives = 134/195 (67%), Gaps = 15/195 (7%)
 Frame = +2

Query: 2   AAIASAIV---IAFSKS-SSSSLFLTSRI--RFASFPKRSFHSTTKLMSQSRY----TTL 51
           AA +S I+   + FS S SSS LF+  R+  R AS P R    T ++  ++       TL
Sbjct: 20  AASSSTILTTSLVFSSSFSSSRLFIRRRLPLRSASSPLRRLCLTREVPVRNLIMPPRATL 199

Query: 52  GLTHPTNIEAPKISFSATDVD--VTEWKGDILAVGVTEKDLTRDAKSRFENSILNKIDLK 109
           G THP N E PKISF+A D+D  V EWKGD+LAV VTEKD+TRD + +F+NSIL  +D K
Sbjct: 200 GFTHPANTETPKISFAAKDIDTDVAEWKGDLLAVAVTEKDVTRDGELKFQNSILRTLDSK 379

Query: 110 LDGLLSEASSEEDFSGKVGQSTVVRI---KGLGSKRVGLIGLGQLPSTTALYKGLGEAVV 166
           L GLL EASSEEDF+GK+GQST++RI    GLGSKR+ L+GLG   S+TA +K LGE+V 
Sbjct: 380 LGGLLGEASSEEDFTGKLGQSTLLRITPAAGLGSKRLALLGLGPSASSTAAFKTLGESVA 559

Query: 167 AVAKSAQASNVAIVL 181
           + A  A A++VA+V+
Sbjct: 560 SAANFAXAAHVAVVV 604


>TC88896 weakly similar to GP|6728968|gb|AAF26966.1| unknown protein
            {Arabidopsis thaliana}, partial (27%)
          Length = 1097

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/113 (24%), Positives = 47/113 (40%), Gaps = 1/113 (0%)
 Frame = -3

Query: 16   SSSSLFLTSRIR-FASFPKRSFHSTTKLMSQSRYTTLGLTHPTNIEAPKISFSATDVDVT 74
            +SSS+F +  I  F SFP   F S+   M  +R  +         +   + FS  DV  +
Sbjct: 1032 ASSSVFFSKEINLFTSFPNDEFSSSVLFMHSTRSCSFCSHSALEFKISILEFSILDVRTS 853

Query: 75   EWKGDILAVGVTEKDLTRDAKSRFENSILNKIDLKLDGLLSEASSEEDFSGKV 127
                   ++ +        +KS F++SI     L +D   S  +S+ DF   +
Sbjct: 852  --IS*CASLSMDSYFSLLASKSDFKSSIS*CASLSMDSYFSLLASKSDFKSSI 700


>TC77841 weakly similar to GP|9294387|dbj|BAB02397.1 cytochrome P450
           {Arabidopsis thaliana}, partial (38%)
          Length = 1299

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 17/59 (28%), Positives = 29/59 (48%)
 Frame = +3

Query: 431 ALVYACNQGVEKIIDLATLTGACVVALGPSIAGVFSPNDELVKEVLEASEVSGEKLWRL 489
           A  Y+CN+ + K  +L +  G C V + P +       D + +    +S   GEKL++L
Sbjct: 552 AFSYSCNEMISKWKELLSSDGTCEVDVWPFLQNFTC--DVISRTAFGSSYAEGEKLFQL 722


>BQ144266 similar to GP|19887436|gb| Fe-S oxidoreductase family protein
           {Methanopyrus kandleri AV19}, partial (2%)
          Length = 1120

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 24/90 (26%), Positives = 39/90 (42%), Gaps = 7/90 (7%)
 Frame = +3

Query: 45  QSRYTTLGL-------THPTNIEAPKISFSATDVDVTEWKGDILAVGVTEKDLTRDAKSR 97
           QS Y+T G          P +I   K+ F A    VT W+G        E  +  D KSR
Sbjct: 237 QSAYSTNGR**KR*NHPRPDHIRPGKVPFPARSRSVT-WRGQ-------ESRVKFDLKSR 392

Query: 98  FENSILNKIDLKLDGLLSEASSEEDFSGKV 127
           +  ++  ++ L  + + S  S+ +   GK+
Sbjct: 393 YIIAVTTRMHLCENNIFSGPSAADPLKGKI 482


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.314    0.132    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,933,743
Number of Sequences: 36976
Number of extensions: 166230
Number of successful extensions: 615
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of query: 567
length of database: 9,014,727
effective HSP length: 101
effective length of query: 466
effective length of database: 5,280,151
effective search space: 2460550366
effective search space used: 2460550366
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)