BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136838.16 + phase: 1 /pseudo
(68 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CB891065 similar to PIR|C86216|C86 protein T23G18.6 [imported] -... 143 1e-35
TC76421 homologue to PIR|T02995|T02995 unspecific monooxygenase ... 143 1e-35
TC76389 homologue to GP|13359451|dbj|BAB33421. putative senescen... 143 1e-35
TC76435 homologue to GP|13359451|dbj|BAB33421. putative senescen... 143 1e-35
CB891360 homologue to PIR|T02995|T02 unspecific monooxygenase (E... 69 3e-13
CB892097 PIR|S17435|S1 polyubiquitin 6 - common sunflower, parti... 69 3e-13
TC76322 similar to PIR|T02955|T02955 probable cytochrome P450 mo... 43 5e-08
TC76361 similar to GP|13359451|dbj|BAB33421. putative senescence... 43 6e-08
BQ751587 similar to PIR|T02955|T029 probable cytochrome P450 mon... 43 6e-08
TC76425 similar to SP|O65781|GAE2_CYATE UDP-glucose 4-epimerase ... 51 8e-08
BE999595 GP|13359451|db putative senescence-associated protein {... 45 4e-06
TC88910 similar to GP|3063767|emb|CAA55784.1 pyruvate orthophosp... 39 4e-04
TC76327 similar to GP|13359451|dbj|BAB33421. putative senescence... 35 0.007
BQ144076 similar to GP|7106224|gb| flagelliform silk protein {Ne... 31 0.11
TC88887 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 29 0.31
TC92743 similar to GP|9759091|dbj|BAB09660.1 contains similarity... 29 0.40
TC90118 homologue to GP|15795116|dbj|BAB02380. jasmonic acid reg... 28 0.52
TC76436 GP|13359451|dbj|BAB33421. putative senescence-associated... 28 0.52
BE999686 similar to SP|O70133|DDX9 ATP-dependent RNA helicase A ... 28 0.52
TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans P... 28 0.68
>CB891065 similar to PIR|C86216|C86 protein T23G18.6 [imported] - Arabidopsis
thaliana, partial (33%)
Length = 800
Score = 143 bits (361), Expect = 1e-35
Identities = 67/68 (98%), Positives = 68/68 (99%)
Frame = -2
Query: 1 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH 60
VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH
Sbjct: 256 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH 77
Query: 61 LSSYFTKS 68
LSS+FTKS
Sbjct: 76 LSSHFTKS 53
>TC76421 homologue to PIR|T02995|T02995 unspecific monooxygenase (EC
1.14.14.1) - common tobacco, partial (44%)
Length = 5080
Score = 143 bits (361), Expect = 1e-35
Identities = 67/68 (98%), Positives = 68/68 (99%)
Frame = -1
Query: 1 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH 60
VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH
Sbjct: 4828 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH 4649
Query: 61 LSSYFTKS 68
LSS+FTKS
Sbjct: 4648 LSSHFTKS 4625
>TC76389 homologue to GP|13359451|dbj|BAB33421. putative
senescence-associated protein {Pisum sativum}, partial
(51%)
Length = 808
Score = 143 bits (361), Expect = 1e-35
Identities = 67/68 (98%), Positives = 68/68 (99%)
Frame = +3
Query: 1 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH 60
VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH
Sbjct: 594 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH 773
Query: 61 LSSYFTKS 68
LSS+FTKS
Sbjct: 774 LSSHFTKS 797
>TC76435 homologue to GP|13359451|dbj|BAB33421. putative
senescence-associated protein {Pisum sativum}, complete
Length = 1389
Score = 143 bits (361), Expect = 1e-35
Identities = 67/68 (98%), Positives = 68/68 (99%)
Frame = +1
Query: 1 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH 60
VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH
Sbjct: 901 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILH 1080
Query: 61 LSSYFTKS 68
LSS+FTKS
Sbjct: 1081LSSHFTKS 1104
>CB891360 homologue to PIR|T02995|T02 unspecific monooxygenase (EC 1.14.14.1)
- common tobacco, partial (23%)
Length = 726
Score = 68.9 bits (167), Expect = 3e-13
Identities = 32/33 (96%), Positives = 33/33 (99%)
Frame = -2
Query: 36 HGISKITLKVVVFHFRCFQLPLILHLSSYFTKS 68
HGISKITLKVVVFHFRCFQLPLILHLSS+FTKS
Sbjct: 458 HGISKITLKVVVFHFRCFQLPLILHLSSHFTKS 360
>CB892097 PIR|S17435|S1 polyubiquitin 6 - common sunflower, partial (29%)
Length = 648
Score = 68.9 bits (167), Expect = 3e-13
Identities = 32/33 (96%), Positives = 33/33 (99%)
Frame = -3
Query: 36 HGISKITLKVVVFHFRCFQLPLILHLSSYFTKS 68
HGISKITLKVVVFHFRCFQLPLILHLSS+FTKS
Sbjct: 253 HGISKITLKVVVFHFRCFQLPLILHLSSHFTKS 155
>TC76322 similar to PIR|T02955|T02955 probable cytochrome P450 monooxygenase
- maize (fragment), partial (60%)
Length = 3098
Score = 42.7 bits (99), Expect(2) = 5e-08
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3
Query: 1 VPPQPNSPPDNVFRPDRPTK 20
VPPQPNSPPDNVF P RP K
Sbjct: 276 VPPQPNSPPDNVFNPGRPAK 335
Score = 28.5 bits (62), Expect(2) = 5e-08
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 32 PPPIHGISKITLKVVVFHFR 51
P P+H ISK T+ VVVFH R
Sbjct: 365 PAPLH*ISKKTIGVVVFHRR 424
>TC76361 similar to GP|13359451|dbj|BAB33421. putative senescence-associated
protein {Pisum sativum}, partial (47%)
Length = 570
Score = 42.7 bits (99), Expect(2) = 6e-08
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +2
Query: 1 VPPQPNSPPDNVFRPDRPTK 20
VPPQPNSPPDNVF P RP K
Sbjct: 272 VPPQPNSPPDNVFNPGRPAK 331
Score = 28.5 bits (62), Expect(2) = 6e-08
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 32 PPPIHGISKITLKVVVFHFR 51
P P+H ISK T+ VVVFH R
Sbjct: 361 PAPLH*ISKKTIGVVVFHRR 420
>BQ751587 similar to PIR|T02955|T029 probable cytochrome P450 monooxygenase -
maize (fragment), partial (20%)
Length = 398
Score = 42.7 bits (99), Expect(2) = 6e-08
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -1
Query: 1 VPPQPNSPPDNVFRPDRPTK 20
VPPQPNSPPDNVF P RP K
Sbjct: 260 VPPQPNSPPDNVFNPGRPAK 201
Score = 28.5 bits (62), Expect(2) = 6e-08
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 32 PPPIHGISKITLKVVVFHFR 51
P P+H ISK T+ VVVFH R
Sbjct: 171 PAPLH*ISKKTIGVVVFHRR 112
>TC76425 similar to SP|O65781|GAE2_CYATE UDP-glucose 4-epimerase GEPI48 (EC
5.1.3.2) (Galactowaldenase) (UDP- galactose
4-epimerase)., partial (58%)
Length = 738
Score = 51.2 bits (121), Expect = 8e-08
Identities = 28/47 (59%), Positives = 32/47 (67%)
Frame = -2
Query: 22 GLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLPLILHLSSYFTKS 68
GL + K S+ + G S VVFHFRCFQLPLILHLSS+FTKS
Sbjct: 188 GLAADKGNSS---VQGTSFGQPYTVVFHFRCFQLPLILHLSSHFTKS 57
>BE999595 GP|13359451|db putative senescence-associated protein {Pisum
sativum}, partial (37%)
Length = 579
Score = 45.4 bits (106), Expect = 4e-06
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -2
Query: 1 VPPQPNSPPDNVFRPDRP 18
VPPQPNSPPDNVFRPDRP
Sbjct: 56 VPPQPNSPPDNVFRPDRP 3
>TC88910 similar to GP|3063767|emb|CAA55784.1 pyruvate orthophosphate
dikinase {Flaveria brownii}, partial (7%)
Length = 685
Score = 38.9 bits (89), Expect = 4e-04
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = -2
Query: 26 KKRGSAPPPIHGISKITLKVVVFHFRCFQ 54
KK +AP P+H SKIT+KV+VF++ CF+
Sbjct: 114 KKMQNAPSPVHEKSKITIKVMVFYYCCFK 28
>TC76327 similar to GP|13359451|dbj|BAB33421. putative senescence-associated
protein {Pisum sativum}, partial (64%)
Length = 868
Score = 34.7 bits (78), Expect = 0.007
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 1 VPPQPNSPPDNVFRPDRPTK 20
VPPQPNSPPD VF DR ++
Sbjct: 560 VPPQPNSPPDYVFNLDRKSR 619
>BQ144076 similar to GP|7106224|gb| flagelliform silk protein {Nephila
clavipes}, partial (2%)
Length = 1163
Score = 30.8 bits (68), Expect = 0.11
Identities = 16/36 (44%), Positives = 18/36 (49%)
Frame = -2
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHG 37
PP P +PP RP P VG G R + PPP G
Sbjct: 154 PPPPAAPPTP--RPPGPAPVGPGGGGRPTPPPPNRG 53
>TC88887 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (18%)
Length = 1681
Score = 29.3 bits (64), Expect = 0.31
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 1 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSA 31
+PP P PP P +P ++ + KRGSA
Sbjct: 1034 IPPGPPGPPGPPGPPPKPPRLAVAPMKRGSA 1126
>TC92743 similar to GP|9759091|dbj|BAB09660.1 contains similarity to unknown
protein~gb|AAF47871.1~gene_id:MJJ3.6 {Arabidopsis
thaliana}, partial (14%)
Length = 662
Score = 28.9 bits (63), Expect = 0.40
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 1 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPI-HGIS 39
+PP P SP N P P + S ++ PPI HG++
Sbjct: 171 MPPPPTSPRSNPSSPPPPPALSPASSASNASNPPIQHGLA 290
>TC90118 homologue to GP|15795116|dbj|BAB02380. jasmonic acid regulatory
protein-like {Arabidopsis thaliana}, partial (43%)
Length = 612
Score = 28.5 bits (62), Expect = 0.52
Identities = 20/54 (37%), Positives = 27/54 (49%), Gaps = 1/54 (1%)
Frame = +3
Query: 4 QPNSPPDNVFRP-DRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLP 56
QPN PP F P D V KK SAP P+ I+++ L + F ++LP
Sbjct: 132 QPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDL----YKFDPWELP 281
>TC76436 GP|13359451|dbj|BAB33421. putative senescence-associated protein
{Pisum sativum}, partial (39%)
Length = 774
Score = 28.5 bits (62), Expect = 0.52
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 1 VPPQPNSPPDNVFR 14
VPPQPNSPPD R
Sbjct: 619 VPPQPNSPPDQTGR 660
>BE999686 similar to SP|O70133|DDX9 ATP-dependent RNA helicase A (Nuclear DNA
helicase II) (NDH II) (DEAD-box protein 9) (mHEL-5).,
partial (1%)
Length = 424
Score = 28.5 bits (62), Expect = 0.52
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 5 PNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 34
P PP F P P K+ RG PPP
Sbjct: 160 PPPPPQKKFPPGGPKKIFFWGAPRGGPPPP 249
>TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans PQN-75
protein (corresponding sequence W03D2.1b)
{Caenorhabditis elegans}, partial (10%)
Length = 546
Score = 28.1 bits (61), Expect = 0.68
Identities = 15/35 (42%), Positives = 16/35 (44%), Gaps = 2/35 (5%)
Frame = +3
Query: 2 PPQ--PNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 34
PP+ P SPP P RP L GS PPP
Sbjct: 243 PPRIGPRSPPTTGSPPTRPPSSPLPDPTTGSPPPP 347
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.142 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,097,566
Number of Sequences: 36976
Number of extensions: 52353
Number of successful extensions: 480
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of query: 68
length of database: 9,014,727
effective HSP length: 44
effective length of query: 24
effective length of database: 7,387,783
effective search space: 177306792
effective search space used: 177306792
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)
Medicago: description of AC136838.16