BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136507.8 + phase: 0
(146 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF633402 similar to PIR|C86226|C862 protein T31J12.4 [imported] ... 74 2e-14
BQ146518 weakly similar to PIR|C86226|C862 protein T31J12.4 [imp... 48 2e-06
TC82919 weakly similar to GP|8843783|dbj|BAA97331.1 gb|AAC80581.... 45 8e-06
BI310630 similar to GP|18087548|gb AT5g55600/MDF20_4 {Arabidopsi... 45 1e-05
TC76356 weakly similar to GP|22135896|gb|AAM91530.1 unknown prot... 42 7e-05
TC91035 similar to PIR|C84650|C84650 hypothetical protein At2g25... 32 0.091
AJ497361 similar to GP|8778540|gb| F22G5.9 {Arabidopsis thaliana... 31 0.16
TC87869 similar to GP|23504577|emb|CAD51456. chromosome condensa... 29 0.77
TC78899 similar to GP|3900936|emb|CAA10167.1 glucan endo-1 3-bet... 28 1.0
BG449655 similar to GP|20198252|gb subtilisin-like serine protea... 28 1.3
TC89247 similar to GP|20303588|gb|AAM19015.1 putative NAM (no ap... 28 1.7
BF646121 similar to GP|20466652|gb| MAP kinase putative {Arabid... 28 1.7
TC86661 similar to GP|9798599|dbj|BAB11737.1 serine/threonine pr... 27 2.9
TC87314 similar to PIR|T00848|T00848 probable serine/threonine-s... 27 3.8
TC78569 similar to GP|21536701|gb|AAM61033.1 1-acylcerol-3-phosp... 26 5.0
TC78362 similar to GP|15391731|emb|CAA93316. nitrite transporter... 26 5.0
TC77360 similar to SP|P32110|GTX6_SOYBN Probable glutathione S-t... 26 5.0
AW687684 26 6.5
BI272620 similar to SP|Q9LQZ7|COL6_ Zinc finger protein constans... 26 6.5
TC79860 homologue to PIR|T06533|T06533 probable gibberellin 20-o... 26 6.5
>BF633402 similar to PIR|C86226|C862 protein T31J12.4 [imported] -
Arabidopsis thaliana, partial (7%)
Length = 427
Score = 73.9 bits (180), Expect = 2e-14
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 10 YKVGDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDE-SELLMETLFPKDL 68
+K G VE+ S+D+GF GS+F IV L + K+++ Y NL++D+ ++ L E+L L
Sbjct: 154 FKPGTLVEISSDDDGFRGSWFTGKIVRRLANNKFMVEYDNLMEDEAGTKHLKESLKLHQL 333
Query: 69 RPIPPHVRNPLKFKLNQKVDVFDNDGWWVGKI 100
RP+ P N + FK +VD + NDGWW G I
Sbjct: 334 RPVLPTEANRV-FKFGDEVDAYHNDGWWEGHI 426
>BQ146518 weakly similar to PIR|C86226|C862 protein T31J12.4 [imported] -
Arabidopsis thaliana, partial (11%)
Length = 432
Score = 47.8 bits (112), Expect = 2e-06
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +3
Query: 80 KFKLNQKVDVFDNDGWWVGKIASEKILMEKSCYYSVYFDYCHQTIYYPCDQIRVHQELVW 139
+F++ +VD + NDGWWVG ++ K+L + Y V+F ++ I + Q+R+HQ+ +
Sbjct: 21 QFEVLDEVDAYYNDGWWVGVVS--KVLGDSK--YIVFFRNSNEEIEFQDSQLRLHQDWMN 188
Query: 140 GDWI 143
G W+
Sbjct: 189 GKWV 200
>TC82919 weakly similar to GP|8843783|dbj|BAA97331.1
gb|AAC80581.1~gene_id:MZN1.7~similar to unknown protein
{Arabidopsis thaliana}, partial (9%)
Length = 1227
Score = 45.4 bits (106), Expect = 8e-06
Identities = 36/141 (25%), Positives = 64/141 (44%), Gaps = 15/141 (10%)
Frame = +2
Query: 11 KVGDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESELLMETLFPKD--- 67
K+ ++VEV S +EGF+GS+ T++ E K ++Y+N+L D+ +E +
Sbjct: 47 KINERVEVKSFEEGFLGSWHPGTVIDS-EKLKRHVQYENILNDNGLGNFVEIVSVSSVLD 223
Query: 68 -----------LRPIPPHVR-NPLKFKLNQKVDVFDNDGWWVGKIASEKILMEKSCYYSV 115
+RP+PP V K VDV + WW G + + ME+ +V
Sbjct: 224 GDIGSLSKRGRIRPVPPLVEFEKCDLKYGLCVDVNYQEAWWEGVVNDKCDGMEER---TV 394
Query: 116 YFDYCHQTIYYPCDQIRVHQE 136
+F + ++R+ Q+
Sbjct: 395 FFPDLGDEMKVGIQEMRITQD 457
>BI310630 similar to GP|18087548|gb AT5g55600/MDF20_4 {Arabidopsis thaliana},
partial (19%)
Length = 730
Score = 45.1 bits (105), Expect = 1e-05
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Frame = +1
Query: 10 YKVGDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDES------------- 56
YKV DK+EV S+D G G +F TIV + ++Y ++ +D S
Sbjct: 418 YKVDDKIEVLSQDSGIRGCWFRCTIVQVARK-QLKVQYDDVQDEDGSGNLEEWIPAFKLA 594
Query: 57 ---ELLMETLFPKDLRPIPPHVRNPLKFKLNQKVDVFDNDGWWVG 98
+L M +RP PP L ++ VD + +DGW G
Sbjct: 595 KPDKLEMRQPGRSTIRPAPPLEEQELIVEVGTAVDAWWSDGWGEG 729
>TC76356 weakly similar to GP|22135896|gb|AAM91530.1 unknown protein
{Arabidopsis thaliana}, partial (36%)
Length = 2619
Score = 42.4 bits (98), Expect = 7e-05
Identities = 39/152 (25%), Positives = 67/152 (43%), Gaps = 20/152 (13%)
Frame = +3
Query: 12 VGDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLK-DDESELLMETLFPKDLRP 70
VG VEV S+D G G +F A+++ K ++Y ++ +DE+ L E + RP
Sbjct: 1179 VGSNVEVLSQDSGIRGCWFRASVIK-RHKDKVKVQYHDIQDAEDEANNLEEWILAS--RP 1349
Query: 71 IPP-------HVRNPLKFKLNQK-----------VDVFDNDGWWVGKIASEKILMEKSCY 112
+ P R ++ L ++ VD + +DGWW G + + E
Sbjct: 1350 VVPDDLGLRVEERTKIRPLLEKRGISFVGDVGYIVDAWWHDGWWEGIVVQK----ESDDK 1517
Query: 113 YSVYF-DYCHQTIYYPCDQIRVHQELVWGDWI 143
Y VYF +I+ PC+ +R ++ W+
Sbjct: 1518 YHVYFPGEKKMSIFGPCN-LRHSRDWTGNGWV 1610
>TC91035 similar to PIR|C84650|C84650 hypothetical protein At2g25590
[imported] - Arabidopsis thaliana, partial (7%)
Length = 709
Score = 32.0 bits (71), Expect = 0.091
Identities = 34/138 (24%), Positives = 60/138 (42%), Gaps = 7/138 (5%)
Frame = +2
Query: 13 GDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESELLMETLFPKDLRPIP 72
G KVE+ +G + A I+S Y + Y N ++ L + K +RP P
Sbjct: 191 GSKVEILVNTQGHGVEWHCARIISG-NGHSYNVEYDN--PSVTAKPLSNRVPRKFIRPCP 361
Query: 73 PHVRNPLKFKLNQKVDVFDNDGWWVGKIASEKILMEKSCYYSVYFDYCHQTIYYPCDQIR 132
P + N ++ N V+V+D W + ++ + E+ +Y V ++ C +++
Sbjct: 362 PAIENIGSWECNDTVEVWDAGCWKEATVLTD--MTEE--FYLV-------RVHGSCMELK 508
Query: 133 VHQELV-----W--GDWI 143
VH+ L W G WI
Sbjct: 509 VHKILTRICQSWQNGQWI 562
>AJ497361 similar to GP|8778540|gb| F22G5.9 {Arabidopsis thaliana}, partial
(4%)
Length = 463
Score = 31.2 bits (69), Expect = 0.16
Identities = 22/69 (31%), Positives = 34/69 (48%), Gaps = 10/69 (14%)
Frame = +3
Query: 70 PIPPHVRNPLKFKLNQKVD---VFDNDGWWVGKIASEKILMEKSCYY---SVYFDYCHQT 123
P+ P + + +K + ++ V D DG WV + +IL+ SC+ S Y DY H T
Sbjct: 105 PLAPELVDRVKEMVKKEYPKDFVVDEDGKWVLQGWKGRILLAVSCWVPS*SNYIDYSHST 284
Query: 124 ----IYYPC 128
IY+ C
Sbjct: 285 LL*GIYFLC 311
>TC87869 similar to GP|23504577|emb|CAD51456. chromosome condensation
protein putative {Plasmodium falciparum 3D7}, partial
(0%)
Length = 1154
Score = 28.9 bits (63), Expect = 0.77
Identities = 17/74 (22%), Positives = 29/74 (38%)
Frame = +1
Query: 70 PIPPHVRNPLKFKLNQKVDVFDNDGWWVGKIASEKILMEKSCYYSVYFDYCHQTIYYPCD 129
P PP F++ VD + DGWW I + +C VY + +
Sbjct: 1 PRPPESVKGCTFEIGAAVDAWCGDGWWESIITAVDASENGTC--QVYSPGEEKFLLVEKR 174
Query: 130 QIRVHQELVWGDWI 143
+R+ Q+ + W+
Sbjct: 175 DLRISQDWIDNMWV 216
>TC78899 similar to GP|3900936|emb|CAA10167.1 glucan endo-1
3-beta-d-glucosidase {Cicer arietinum}, partial (94%)
Length = 1296
Score = 28.5 bits (62), Expect = 1.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 110 SCYYSVYFDYCHQTIYYPCDQIRVHQELVWGDW 142
+C+Y+V H T Y C +H+ L+W DW
Sbjct: 80 ACWYTV-----HWTTIYSCG---IHRSLLWNDW 154
>BG449655 similar to GP|20198252|gb subtilisin-like serine protease AIR3
{Arabidopsis thaliana}, partial (21%)
Length = 664
Score = 28.1 bits (61), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (65%), Gaps = 2/24 (8%)
Frame = -2
Query: 111 CYYSVYFDY--CHQTIYYPCDQIR 132
CY S YF + C +TIY PC +++
Sbjct: 315 CYLSCYFFFQSCSKTIYVPCVRVK 244
>TC89247 similar to GP|20303588|gb|AAM19015.1 putative NAM (no apical
meristem) protein {Oryza sativa (japonica
cultivar-group)}, partial (39%)
Length = 1255
Score = 27.7 bits (60), Expect = 1.7
Identities = 11/38 (28%), Positives = 24/38 (62%)
Frame = +2
Query: 76 RNPLKFKLNQKVDVFDNDGWWVGKIASEKILMEKSCYY 113
+ PL+ +L +++D++ D W + K ++ + EK CY+
Sbjct: 317 KKPLRIELIKEIDIYKYDPWDLPKAST---VGEKECYF 421
>BF646121 similar to GP|20466652|gb| MAP kinase putative {Arabidopsis
thaliana}, partial (7%)
Length = 517
Score = 27.7 bits (60), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 47 YKNLLKDDESELLMETLFPKDLRPIPPHVRNPLKFKLNQ 85
YK+ E++ + L P+ L P+PPH+ +P NQ
Sbjct: 196 YKHRSAQKEAKEDSDNLAPRFLPPLPPHIIHPKASPSNQ 312
>TC86661 similar to GP|9798599|dbj|BAB11737.1 serine/threonine protein kinase
{Arabidopsis thaliana}, partial (58%)
Length = 1840
Score = 26.9 bits (58), Expect = 2.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 67 DLRPIPPHVRNPLKFKLNQKVDVFDN 92
+L P PP ++NP +F +K D+ N
Sbjct: 1251 NLSPSPPSIKNPERFNPLEKNDIISN 1174
>TC87314 similar to PIR|T00848|T00848 probable serine/threonine-specific
protein kinase T20F6.6 (EC 2.7.1.-) - Arabidopsis
thaliana, partial (80%)
Length = 1575
Score = 26.6 bits (57), Expect = 3.8
Identities = 11/16 (68%), Positives = 13/16 (80%)
Frame = -3
Query: 121 HQTIYYPCDQIRVHQE 136
HQ+I Y DQIR+HQE
Sbjct: 496 HQSIPYKHDQIRLHQE 449
>TC78569 similar to GP|21536701|gb|AAM61033.1 1-acylcerol-3-phosphate
acyltransferase-like protein {Arabidopsis thaliana},
partial (92%)
Length = 1503
Score = 26.2 bits (56), Expect = 5.0
Identities = 7/29 (24%), Positives = 18/29 (61%)
Frame = +2
Query: 111 CYYSVYFDYCHQTIYYPCDQIRVHQELVW 139
C Y++ D ++++Y C+Q+ + ++W
Sbjct: 1373 CIYTIG*DGVQKSLHYSCEQLYIRMLILW 1459
>TC78362 similar to GP|15391731|emb|CAA93316. nitrite transporter {Cucumis
sativus}, partial (88%)
Length = 1871
Score = 26.2 bits (56), Expect = 5.0
Identities = 9/19 (47%), Positives = 12/19 (62%)
Frame = +2
Query: 108 EKSCYYSVYFDYCHQTIYY 126
EK CY V YC+ T+Y+
Sbjct: 1487 EKQCYCFVLHSYCYWTLYW 1543
>TC77360 similar to SP|P32110|GTX6_SOYBN Probable glutathione S-transferase
(EC 2.5.1.18) (Heat shock protein 26A) (G2-4). [Soybean],
complete
Length = 1140
Score = 26.2 bits (56), Expect = 5.0
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -1
Query: 122 QTIYYP-CDQIRVHQELVWGDW 142
+ + YP CD + HQ+ VW DW
Sbjct: 1098 RVLTYPICDYLT*HQQRVWVDW 1033
>AW687684
Length = 488
Score = 25.8 bits (55), Expect = 6.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 76 RNPLKFKLNQKVDVFDNDGWWVGKIASEKILME 108
R+P+ LN KVDVF N A++ + +E
Sbjct: 137 RSPVPVSLNGKVDVFSNQPLLTNGHATDSVSLE 235
>BI272620 similar to SP|Q9LQZ7|COL6_ Zinc finger protein constans-like 6.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (15%)
Length = 707
Score = 25.8 bits (55), Expect = 6.5
Identities = 11/32 (34%), Positives = 16/32 (49%), Gaps = 5/32 (15%)
Frame = -3
Query: 95 WWVGKIASEKILM-----EKSCYYSVYFDYCH 121
WW+ + + L E++CY SVY D H
Sbjct: 315 WWMMNLGLKNCLKA*HQREETCYVSVYVDLLH 220
>TC79860 homologue to PIR|T06533|T06533 probable gibberellin 20-oxidase -
garden pea, partial (93%)
Length = 1454
Score = 25.8 bits (55), Expect = 6.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +3
Query: 120 CHQTIYYPCDQIRVHQELVW 139
CH T + PC + E +W
Sbjct: 81 CHDTSFLPCQVTNIPSEFIW 140
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.142 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,771,300
Number of Sequences: 36976
Number of extensions: 83495
Number of successful extensions: 487
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of query: 146
length of database: 9,014,727
effective HSP length: 87
effective length of query: 59
effective length of database: 5,797,815
effective search space: 342071085
effective search space used: 342071085
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)
Medicago: description of AC136507.8