TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136507.18 - phase: 1 /pseudo
         (305 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC82456 weakly similar to GP|18057159|gb|AAL58182.1 putative far...    62  3e-10
AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~...    62  4e-10
BG449141 similar to GP|15983442|gb At1g10240/F14N23_12 {Arabidop...    57  9e-09
TC89654 weakly similar to PIR|T05644|T05644 hypothetical protein...    42  3e-04
TC83834 similar to PIR|G96565|G96565 F6D8.26 [imported] - Arabid...    42  4e-04
TC88749                                                                40  0.001
CB893717 similar to SP|O04933|SPS Sucrose-phosphate synthase 2 (...    30  1.2
TC80505                                                                29  2.0
TC78006 similar to GP|9758963|dbj|BAB09406.1 gb|AAF19567.1~gene_...    28  3.4
TC90238 similar to PIR|T07126|T07126 magnesium chelatase (EC 4.9...    28  5.7
BG584505 similar to GP|22831651|gb| CG32780-PA {Drosophila melan...    27  7.5
TC76415 similar to PIR|T05479|T05479 hypothetical protein T8O5.1...    27  7.5
TC79698 similar to GP|10176933|dbj|BAB10177. gene_id:MTG10.18~un...    27  9.8
TC90358 similar to PIR|D96799|D96799 hypothetical protein F22K20...    27  9.8

>TC82456 weakly similar to GP|18057159|gb|AAL58182.1 putative far-red
           impaired response protein {Oryza sativa}, partial (7%)
          Length = 1244

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
 Frame = +2

Query: 125 RGDKKPLQYLISKLEEHKYTYYSRTQLESN-TIEDIFWAHPTSIKLFNNFPTVLVMDSTY 183
           RGD   +     ++++    +Y    ++    I+++FWA       +  F  V+ +D+TY
Sbjct: 710 RGDVDAIHSFFHRMQKQNSQFYCAMDMDDKRNIQNLFWADARCRAAYEYFGEVITLDTTY 889

Query: 184 KTNIYRMPMFEVVGVTSTDLTYSVGFGFMTHEKEENFVWVLKMLRKLLSSKMNMPKVIVT 243
            T+ Y +P+   VGV     T  +G   +++   +   W+    R L     + P  I+T
Sbjct: 890 LTSKYDLPLVPFVGVNHHGQTILLGCAILSNLDAKTLTWL--FTRWLECMHGHAPNGIIT 1063

Query: 244 DRDMSLMKAVAHVFPESYAMNCYFHVQANVKQ 275
           + D ++  A+   FP++    C +H+   V +
Sbjct: 1064EEDKAMKNAIEVAFPKARHRWCLWHIMKKVPE 1159


>AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~similar to
           Arabidopsis thaliana F20D10.300, partial (11%)
          Length = 662

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 35/114 (30%), Positives = 56/114 (48%)
 Frame = +1

Query: 176 VLVMDSTYKTNIYRMPMFEVVGVTSTDLTYSVGFGFMTHEKEENFVWVLKMLRKLLSSKM 235
           VL  D+TYK N Y  P+    G      T   G   +  E  E++ WVL    + + +K 
Sbjct: 4   VLAFDTTYKKNKYNYPLCIFSGCNHHSQTIIFGVALLEDETIESYKWVLNRFLECMENKF 183

Query: 236 NMPKVIVTDRDMSLMKAVAHVFPESYAMNCYFHVQANVKQRCVLDCKYPLGFKK 289
             PK +VTD D S+ +A+  VFP++    C +H+  N ++  +    +  GF+K
Sbjct: 184 --PKAVVTDGDGSMREAIKQVFPDASHRLCAWHLHKNAQEN-IKKTPFLEGFRK 336


>BG449141 similar to GP|15983442|gb At1g10240/F14N23_12 {Arabidopsis
           thaliana}, partial (33%)
          Length = 690

 Score = 57.0 bits (136), Expect = 9e-09
 Identities = 30/119 (25%), Positives = 64/119 (53%)
 Frame = +3

Query: 153 SNTIEDIFWAHPTSIKLFNNFPTVLVMDSTYKTNIYRMPMFEVVGVTSTDLTYSVGFGFM 212
           +N +E+I W++ +SI+L++ F   +V D+T++   + MP+   VG+ +  +    G   +
Sbjct: 312 NNRLENIAWSYASSIQLYDIFGDAVVFDTTHRLTAFDMPLGLWVGINNYGMPCFFGCVLL 491

Query: 213 THEKEENFVWVLKMLRKLLSSKMNMPKVIVTDRDMSLMKAVAHVFPESYAMNCYFHVQA 271
             E   +F W +K     ++ K   P+ I+TD+++ L +A++   P +    C + + A
Sbjct: 492 RDETVRSFSWAIKAFLGFMNGK--APQTILTDQNICLKEALSAEMPMTKHAFCIWMIVA 662


>TC89654 weakly similar to PIR|T05644|T05644 hypothetical protein F20D10.290
           - Arabidopsis thaliana, partial (65%)
          Length = 1358

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 23/72 (31%), Positives = 34/72 (46%)
 Frame = +2

Query: 126 GDKKPLQYLISKLEEHKYTYYSRTQLESNTIEDIFWAHPTSIKLFNNFPTVLVMDSTYKT 185
           G  + L YL     E+   +Y+      N   +IFWA  T    ++ F   ++ D+TYKT
Sbjct: 119 GGHQVLDYLKRMRAENHAFFYAVQSDVDNAGGNIFWADETCRTNYSYFGDTVIFDTTYKT 298

Query: 186 NIYRMPMFEVVG 197
           N YR+P     G
Sbjct: 299 NQYRVPFASFTG 334


>TC83834 similar to PIR|G96565|G96565 F6D8.26 [imported] - Arabidopsis
           thaliana, partial (24%)
          Length = 1032

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 35/198 (17%), Positives = 79/198 (39%), Gaps = 2/198 (1%)
 Frame = +3

Query: 30  KCGCLFMISGYQSKQTKEWRLNILNGVHNHPMEPALEGHILAGRLKEDDKKIVRDLTKNK 89
           + GC  MI   +  +++ WR+  +   HNH +   +   I    L   D +      K  
Sbjct: 414 RTGCPAMIR-MKLVESQRWRICEVTLEHNHVLGAKIHKSIKKNSLPSSDAE-----GKTI 575

Query: 90  MLPRNILIHLK-NQRPHCMTNVKQVYNERQQIWKANRGDKKPLQYLISKLE-EHKYTYYS 147
            +   ++I  + N   +      + +++        +GD + +   + +++  +   +Y 
Sbjct: 576 KVYHALVIDTEGNDNLNSNARDDRAFSKYSNKLNLRKGDTQAIYNFLCRMQLTNPNFFYL 755

Query: 148 RTQLESNTIEDIFWAHPTSIKLFNNFPTVLVMDSTYKTNIYRMPMFEVVGVTSTDLTYSV 207
               +   + +  W    S      F  V+  D+TY  N Y +P+  +VG+     +  +
Sbjct: 756 MDFNDEGHLRNALWVDAKSRAACGYFSDVIYFDNTYLVNKYEIPLVALVGINHHGQSVLL 935

Query: 208 GFGFMTHEKEENFVWVLK 225
           G G +  E  E++ W+ +
Sbjct: 936 GCGLLAGEIIESYKWLFR 989


>TC88749 
          Length = 1221

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +2

Query: 1   NPMFRLVCERSGSHIVPKKKPKHAGTGSR 29
           NPM  L+CERSG H V KK+ KH  T SR
Sbjct: 641 NPMLELMCERSGDHKVSKKRLKHEAT*SR 727


>CB893717 similar to SP|O04933|SPS Sucrose-phosphate synthase 2 (EC 2.4.1.14)
           (UDP-glucose-fructose- phosphate glucosyltransferase
           2)., partial (22%)
          Length = 843

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 18/41 (43%), Positives = 28/41 (67%), Gaps = 1/41 (2%)
 Frame = -3

Query: 63  PALEGHILAGRLKEDDK-KIVRDLTKNKMLPRNILIHLKNQ 102
           P LEGH+L  +LK D K ++V+DL K+ +   NI I L+++
Sbjct: 127 PPLEGHVLQPQLK*DQKAQLVQDL*KHPLSLPNIGICLEHR 5


>TC80505 
          Length = 675

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 21/63 (33%), Positives = 27/63 (42%)
 Frame = +1

Query: 152 ESNTIEDIFWAHPTSIKLFNNFPTVLVMDSTYKTNIYRMPMFEVVGVTSTDLTYSVGFGF 211
           ESN     F  H   ++ + NFPT   ++S  K NIY    F V  +        VGFG 
Sbjct: 316 ESNNFSFSFLFHK*KLQKYTNFPTPFSINSPPKPNIYFFLSFLV*DL-------RVGFGT 474

Query: 212 MTH 214
             H
Sbjct: 475 CHH 483


>TC78006 similar to GP|9758963|dbj|BAB09406.1
            gb|AAF19567.1~gene_id:MYH9.6~similar to unknown protein
            {Arabidopsis thaliana}, partial (48%)
          Length = 1808

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -2

Query: 135  ISKLEEHKYTYYS-RTQLESNTIEDIFWAHPTSIKLFNNFPTVL-VMDSTY 183
            ++K  + KY Y   +     NT EDI++ +P   KLF +   +   MDS Y
Sbjct: 1771 VNKNHKKKYVYSEGKKSRVMNTFEDIYYPNPPQHKLFLHLRKIA*TMDSLY 1619


>TC90238 similar to PIR|T07126|T07126 magnesium chelatase (EC 4.99.1.-)
           chain chlH - soybean, partial (15%)
          Length = 844

 Score = 27.7 bits (60), Expect = 5.7
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -1

Query: 167 IKLFNNFPTVLVMDSTYKTNIYRMPMFEVVGVTSTDLTYS 206
           +  +N    +++M+  Y  N+Y  P+F  + +T  +L +S
Sbjct: 160 LSFYNKEKVLVMMERWYLRNLYTFPLFFQICLTKVELCFS 41


>BG584505 similar to GP|22831651|gb| CG32780-PA {Drosophila melanogaster},
           partial (1%)
          Length = 822

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 21/86 (24%), Positives = 38/86 (43%)
 Frame = +2

Query: 73  RLKEDDKKIVRDLTKNKMLPRNILIHLKNQRPHCMTNVKQVYNERQQIWKANRGDKKPLQ 132
           R  ED +K+     + K + R   I  ++QR   +   + +  E++ I K      +PLQ
Sbjct: 2   RKSEDREKVGLKQYQKKKMERQRQI-ARDQRE--LARQRNIKIEKEAIEKEKNNKLRPLQ 172

Query: 133 YLISKLEEHKYTYYSRTQLESNTIED 158
           +   K+E+         Q++   IED
Sbjct: 173 FQKKKIEDDTEAKLRPLQIQKQKIED 250


>TC76415 similar to PIR|T05479|T05479 hypothetical protein T8O5.180 -
           Arabidopsis thaliana, partial (30%)
          Length = 1114

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 35  FMISGYQSKQTKEWRLNIL 53
           F+   + SK+ KEWR+NI+
Sbjct: 188 FVFEAFDSKKVKEWRINIV 244


>TC79698 similar to GP|10176933|dbj|BAB10177. gene_id:MTG10.18~unknown
           protein {Arabidopsis thaliana}, partial (44%)
          Length = 681

 Score = 26.9 bits (58), Expect = 9.8
 Identities = 17/59 (28%), Positives = 27/59 (44%), Gaps = 4/59 (6%)
 Frame = -1

Query: 152 ESNTIEDIFWAHPTSIKLFNNFPTVLVMDS----TYKTNIYRMPMFEVVGVTSTDLTYS 206
           ++ T E+I W     I L+N   T L  D     T+  NIY +  F +     ++L +S
Sbjct: 411 DNKTRENIIWIMDMWIPLYNKRVTTLFTDCVECFTFSHNIYLITCFVITKAIPSNL*FS 235


>TC90358 similar to PIR|D96799|D96799 hypothetical protein F22K20.13
           [imported] - Arabidopsis thaliana, partial (13%)
          Length = 846

 Score = 26.9 bits (58), Expect = 9.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 85  LTKNKMLPRNILIHLKNQRPHCMTNVKQVYNERQQI 120
           + +NKM+   IL+HL  Q+    + V+   N + QI
Sbjct: 570 MERNKMISTKILVHLYLQKNEGQSKVRNPSNRKTQI 677


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,406,335
Number of Sequences: 36976
Number of extensions: 145453
Number of successful extensions: 769
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of query: 305
length of database: 9,014,727
effective HSP length: 96
effective length of query: 209
effective length of database: 5,465,031
effective search space: 1142191479
effective search space used: 1142191479
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)