TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136502.1 + phase: 0 
         (64 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC80231 weakly similar to GP|8809633|dbj|BAA97184.1 contains sim...   146  1e-36
TC78341 similar to GP|21555501|gb|AAM63873.1 embryo-specific pro...    77  1e-15
TC93836 weakly similar to GP|3241945|gb|AAC23732.1| unknown prot...    75  5e-15
TC86743 weakly similar to GP|8809633|dbj|BAA97184.1 contains sim...    72  3e-14
TC82647 weakly similar to GP|3241945|gb|AAC23732.1| unknown prot...    71  9e-14
BG581981                                                               64  1e-11
AW685288                                                               59  4e-10
TC80910 weakly similar to GP|8809633|dbj|BAA97184.1 contains sim...    55  4e-09
TC81693                                                                27  1.2
BQ141746                                                               27  1.2
BF518760 similar to GP|21537375|gb| unknown {Arabidopsis thalian...    27  1.2
TC90989 similar to GP|21537375|gb|AAM61716.1 unknown {Arabidopsi...    27  1.6
BQ136095                                                               26  3.5
TC93033 GP|12248899|dbj|BAB20321. diaphanous homologue {Gallus g...    25  4.5
BQ143875 GP|10441918|gb unknown {Homo sapiens}, partial (3%)           25  4.5
TC91635 similar to PIR|A84854|A84854 hypothetical protein At2g42...    25  5.9
BG583869 weakly similar to GP|9294172|dbj| ER lumen protein reta...    25  7.7
TC76673 homologue to SP|P12858|G3PA_PEA Glyceraldehyde 3-phospha...    25  7.7
AL377770 similar to PIR|T48853|T488 response reactor 3 [imported...    25  7.7

>TC80231 weakly similar to GP|8809633|dbj|BAA97184.1 contains similarity to
           embryo-specific protein 3~gene_id:MMI9.3 {Arabidopsis
           thaliana}, partial (48%)
          Length = 681

 Score =  146 bits (369), Expect = 1e-36
 Identities = 64/64 (100%), Positives = 64/64 (100%)
 Frame = +3

Query: 1   MVSFDIVGQCLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFNH 60
           MVSFDIVGQCLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFNH
Sbjct: 360 MVSFDIVGQCLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFNH 539

Query: 61  CNEV 64
           CNEV
Sbjct: 540 CNEV 551


>TC78341 similar to GP|21555501|gb|AAM63873.1 embryo-specific protein-like
           {Arabidopsis thaliana}, partial (8%)
          Length = 1017

 Score = 77.4 bits (189), Expect = 1e-15
 Identities = 31/60 (51%), Positives = 44/60 (72%)
 Frame = +3

Query: 2   VSFDIVGQCLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFNHC 61
           + F+I+G C+  ICK+YL R G++GWIP TV AY++  PPV F YN  +P++  YGFN+C
Sbjct: 363 MDFEILGPCIGKICKMYLFRNGTDGWIPETVIAYHHDNPPVTFKYNIDIPKDSGYGFNNC 542


>TC93836 weakly similar to GP|3241945|gb|AAC23732.1| unknown protein
           {Arabidopsis thaliana}, partial (9%)
          Length = 760

 Score = 75.1 bits (183), Expect = 5e-15
 Identities = 30/62 (48%), Positives = 42/62 (67%)
 Frame = +1

Query: 2   VSFDIVGQCLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFNHC 61
           VSFD++G+C + IC+LYL R G +GW P TV  Y+Y YPPV F YN  + +    G+N+C
Sbjct: 385 VSFDVMGECTSQICELYLFRKGRDGWKPETVVVYDYNYPPVIFNYNVCLTKGRGIGYNYC 564

Query: 62  NE 63
            +
Sbjct: 565 GQ 570


>TC86743 weakly similar to GP|8809633|dbj|BAA97184.1 contains similarity to
           embryo-specific protein 3~gene_id:MMI9.3 {Arabidopsis
           thaliana}, partial (48%)
          Length = 804

 Score = 72.4 bits (176), Expect = 3e-14
 Identities = 29/59 (49%), Positives = 39/59 (65%)
 Frame = +2

Query: 3   SFDIVGQCLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFNHC 61
           +F+I G C   IC LYL+R G +GW P +VT Y + Y P  FYYN ++P  V YGF++C
Sbjct: 332 TFNINGPCTYPICYLYLYRSGYDGWKPESVTVYTHNYQPATFYYNAFIPNGVWYGFDYC 508


>TC82647 weakly similar to GP|3241945|gb|AAC23732.1| unknown protein
           {Arabidopsis thaliana}, partial (31%)
          Length = 727

 Score = 70.9 bits (172), Expect = 9e-14
 Identities = 30/61 (49%), Positives = 39/61 (63%)
 Frame = +2

Query: 3   SFDIVGQCLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFNHCN 62
           +F I G C   IC +YL+R GS+GW P +V    Y   PV FYYNT++P +  YGFN CN
Sbjct: 413 TFQINGPCAYQICYVYLYRSGSSGWKPESVKINGYSGEPVTFYYNTFIPRDTWYGFNLCN 592

Query: 63  E 63
           +
Sbjct: 593 D 595


>BG581981 
          Length = 709

 Score = 63.5 bits (153), Expect = 1e-11
 Identities = 26/61 (42%), Positives = 38/61 (61%), Gaps = 1/61 (1%)
 Frame = -3

Query: 4   FDIV-GQCLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFNHCN 62
           FD+V   C+  IC ++  R G++GWIP + T YN GYPP+ F +N  +P  V  G  +CN
Sbjct: 299 FDLVQANCIGKICSMFFVRFGTDGWIPESATLYNDGYPPITFNFNYLIPFGVPSGIYNCN 120

Query: 63  E 63
           +
Sbjct: 119 K 117


>AW685288 
          Length = 524

 Score = 58.9 bits (141), Expect = 4e-10
 Identities = 24/59 (40%), Positives = 35/59 (58%), Gaps = 1/59 (1%)
 Frame = +1

Query: 4   FDIV-GQCLNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFNHC 61
           FD+V   C+  IC ++  R G++GWIP + T YN GYPP+   +N  +P  V  G  +C
Sbjct: 343 FDLVQANCIGKICSMFFVRFGTDGWIPESATLYNDGYPPITXNFNYLIPXGVPSGIYNC 519


>TC80910 weakly similar to GP|8809633|dbj|BAA97184.1 contains similarity to
           embryo-specific protein 3~gene_id:MMI9.3 {Arabidopsis
           thaliana}, partial (31%)
          Length = 910

 Score = 55.5 bits (132), Expect = 4e-09
 Identities = 25/63 (39%), Positives = 36/63 (56%), Gaps = 3/63 (4%)
 Frame = +3

Query: 3   SFDIVGQCLNDICKLYLHRVGSN---GWIPTTVTAYNYGYPPVKFYYNTYVPENVDYGFN 59
           SF + G C + IC  YL+R GS    GW P +V  Y Y    V F +N+ +P +  YG+N
Sbjct: 342 SFQLDGPCASPICFAYLYRSGSTDNKGWEPESVKIYGYNSDAVTFTFNSSIPSDTWYGYN 521

Query: 60  HCN 62
           +C+
Sbjct: 522 YCD 530


>TC81693 
          Length = 1012

 Score = 27.3 bits (59), Expect = 1.2
 Identities = 14/37 (37%), Positives = 16/37 (42%)
 Frame = +1

Query: 11 LNDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYN 47
          LN I  L+L  V    W P T     YGYP     +N
Sbjct: 34 LNTIHNLFLQHV-PGPWAPPTPAGIGYGYPETMLPFN 141


>BQ141746 
          Length = 1129

 Score = 27.3 bits (59), Expect = 1.2
 Identities = 12/35 (34%), Positives = 21/35 (59%), Gaps = 3/35 (8%)
 Frame = +2

Query: 28  IPTTVTAYNYGY---PPVKFYYNTYVPENVDYGFN 59
           IPTT+ + +Y     PP+++YY+  +P  +   FN
Sbjct: 227 IPTTIFS*SYFLTTPPPIQYYYSFLIPPLIPIHFN 331


>BF518760 similar to GP|21537375|gb| unknown {Arabidopsis thaliana},
          partial (83%)
          Length = 439

 Score = 27.3 bits (59), Expect = 1.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 10 CLNDICKLYLHRVGSN 25
          C+  IC+L++H+VG N
Sbjct: 50 CMEKICRLFVHKVGEN 97


>TC90989 similar to GP|21537375|gb|AAM61716.1 unknown {Arabidopsis
           thaliana}, partial (83%)
          Length = 643

 Score = 26.9 bits (58), Expect = 1.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 10  CLNDICKLYLHRVGSN 25
           C+  IC+L++H+VG N
Sbjct: 131 CVEKICRLFVHKVGEN 178


>BQ136095 
          Length = 820

 Score = 25.8 bits (55), Expect = 3.5
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +3

Query: 28  IPTTVTAY---NYGYPPVKFYYNTYVPENVDY 56
           +P  +T +   +Y YPP+ F+  + VP+  DY
Sbjct: 399 VPLRMTFFLVNSYLYPPIPFHSTSMVPDADDY 494


>TC93033 GP|12248899|dbj|BAB20321. diaphanous homologue {Gallus gallus},
           partial (0%)
          Length = 986

 Score = 25.4 bits (54), Expect = 4.5
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -3

Query: 12  NDICKLYLHRVGSN--GWI---PTTVTAYNYGYPPVKFYY 46
           +D+C   LH V S    W+   PT  T  NY Y P   YY
Sbjct: 138 HDVC---LHTVSSVFFRWLSGHPTRFTFSNYAYNPAAIYY 28


>BQ143875 GP|10441918|gb unknown {Homo sapiens}, partial (3%)
          Length = 651

 Score = 25.4 bits (54), Expect = 4.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 28  IPTTVTAYNYGYPPVKFYYNTYVP 51
           +P  +  +N+G+   +FY + Y+P
Sbjct: 498 LPAALLTFNFGHTIYRFYIDVYLP 569


>TC91635 similar to PIR|A84854|A84854 hypothetical protein At2g42450
           [imported] - Arabidopsis thaliana, partial (71%)
          Length = 1919

 Score = 25.0 bits (53), Expect = 5.9
 Identities = 12/37 (32%), Positives = 19/37 (50%), Gaps = 2/37 (5%)
 Frame = +1

Query: 7   VGQCLNDICKLYLHRVGSN--GWIPTTVTAYNYGYPP 41
           +G  +  +  + +HR  S   G+ P  V+A  YG PP
Sbjct: 958 LGGAIASLLAIMIHRKSSKELGFSPDIVSAVGYGTPP 1068


>BG583869 weakly similar to GP|9294172|dbj| ER lumen protein retaining
           receptor-like protein {Arabidopsis thaliana}, partial
           (35%)
          Length = 540

 Score = 24.6 bits (52), Expect = 7.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 9   QCLNDICKLYLHRVGSN 25
           +C ND+C L++ ++G N
Sbjct: 148 ECFNDLCILHITKLGKN 98


>TC76673 homologue to SP|P12858|G3PA_PEA Glyceraldehyde 3-phosphate
           dehydrogenase A  chloroplast precursor (EC 1.2.1.13),
           complete
          Length = 1679

 Score = 24.6 bits (52), Expect = 7.7
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 12  NDICKLYLHRVGSNGWIPTTVTAYNYGYPPVKFYYNTYV 50
           ND+ +  L  + ++  +P+  +   YGY    F+YNT++
Sbjct: 521 NDVKRRVLTTMPTSQEVPSDPSKSVYGYLNFCFHYNTFL 405


>AL377770 similar to PIR|T48853|T488 response reactor 3 [imported] -
           Arabidopsis thaliana, partial (12%)
          Length = 487

 Score = 24.6 bits (52), Expect = 7.7
 Identities = 10/16 (62%), Positives = 13/16 (80%)
 Frame = +3

Query: 31  TVTAYNYGYPPVKFYY 46
           T+T+YNY Y P+KF Y
Sbjct: 393 TITSYNYHY-PLKFMY 437


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.323    0.144    0.490 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,884,288
Number of Sequences: 36976
Number of extensions: 38973
Number of successful extensions: 219
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of query: 64
length of database: 9,014,727
effective HSP length: 40
effective length of query: 24
effective length of database: 7,535,687
effective search space: 180856488
effective search space used: 180856488
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)