TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136472.16 - phase: 0 
         (212 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC85093 similar to PIR|F86344|F86344 hypothetical protein AAF806...   315  8e-87
CB066751 similar to PIR|F86344|F86 hypothetical protein AAF80647...   194  1e-51
BE325311 similar to PIR|F86344|F86 hypothetical protein AAF80647...   196  6e-51
TC82329 similar to SP|Q01371|WC1_NEUCR White collar 1 protein (W...    28  3.4
CA917904 homologue to GP|19717681|gb| arsenite transport subunit...    27  4.4
TC84315 similar to GP|11876272|emb|CAC18917. unnamed protein pro...    27  7.5

>TC85093 similar to PIR|F86344|F86344 hypothetical protein AAF80647.1
           [imported] - Arabidopsis thaliana, partial (59%)
          Length = 548

 Score =  315 bits (807), Expect = 8e-87
 Identities = 161/163 (98%), Positives = 162/163 (98%)
 Frame = +3

Query: 1   MAEIQHHHAATLARSESKVYNMDVEKKGEEENDEKDYTQRAQWLRAAVLGANDGLLSTAS 60
           MAEIQHHHAATLARSESKVY+MDVEKKGEEENDEKDYTQRAQWLRAAVLGANDGLLSTAS
Sbjct: 30  MAEIQHHHAATLARSESKVYSMDVEKKGEEENDEKDYTQRAQWLRAAVLGANDGLLSTAS 209

Query: 61  LMMGVGAVTKDVKTMILTGIAGLVAGACSMAIGEFVSVYSQYDIEFAQMKRQGNISQKDK 120
           LMMGVGAVTKDVKTMILTGIAGLVAGACSMAIGEFVSVYSQYDIEFAQMKRQGNISQKDK
Sbjct: 210 LMMGVGAVTKDVKTMILTGIAGLVAGACSMAIGEFVSVYSQYDIEFAQMKRQGNISQKDK 389

Query: 121 LPNPYYAAFASAIAFAVGAFVPLLGAAFVKDYKVRLGVVVGVV 163
           LPNPYYAAFASAIAFAVGAFVPLLGAAFVKDYKVRLGV VGVV
Sbjct: 390 LPNPYYAAFASAIAFAVGAFVPLLGAAFVKDYKVRLGVXVGVV 518


>CB066751 similar to PIR|F86344|F86 hypothetical protein AAF80647.1
           [imported] - Arabidopsis thaliana, partial (76%)
          Length = 777

 Score =  194 bits (494), Expect(2) = 1e-51
 Identities = 101/151 (66%), Positives = 118/151 (77%), Gaps = 7/151 (4%)
 Frame = -1

Query: 64  GVGAVTKDVKTMILTGIAGLVAGACSMAIGEFVSVYSQYDIEFAQMKRQ-------GNIS 116
           GVGAV +D+K MILTG AGLVAGACSMAIGEFVSVYSQ DIE AQMKR+        +  
Sbjct: 744 GVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGREINDDE 565

Query: 117 QKDKLPNPYYAAFASAIAFAVGAFVPLLGAAFVKDYKVRLGVVVGVVSLALFGFGLLSAV 176
           +K+  PNP  AA ASA+AF++GA VPLL A F++DYKVR+GVVV  VS AL  FG L AV
Sbjct: 564 EKESFPNPLQAAAASALAFSIGAMVPLLAAFFIRDYKVRVGVVVAAVSFALLVFGWLGAV 385

Query: 177 LGKAPLVKSSLRVLIGGWLAMSLTFGLTKLV 207
           LGKAP+ +S LRVL GGW+AMS+TFGLTKL+
Sbjct: 384 LGKAPIFRSVLRVLFGGWMAMSITFGLTKLI 292



 Score = 25.4 bits (54), Expect(2) = 1e-51
 Identities = 11/12 (91%), Positives = 12/12 (99%)
 Frame = -2

Query: 53  DGLLSTASLMMG 64
           DGL+STASLMMG
Sbjct: 776 DGLVSTASLMMG 741


>BE325311 similar to PIR|F86344|F86 hypothetical protein AAF80647.1
           [imported] - Arabidopsis thaliana, partial (60%)
          Length = 589

 Score =  196 bits (498), Expect = 6e-51
 Identities = 100/140 (71%), Positives = 118/140 (83%), Gaps = 5/140 (3%)
 Frame = +2

Query: 29  EEENDEKDYTQRAQWLRAAVLGANDGLLSTASLMMGVGAVTKDVKTMILTGIAGLVAGAC 88
           E E+DE DY++R+QWLRAAVLGANDGL+STASLMMGVGAV +D+K MIL+G AGLVAGAC
Sbjct: 149 EIESDEFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGAC 328

Query: 89  SMAIGEFVSVYSQYDIEFAQMKRQ-----GNISQKDKLPNPYYAAFASAIAFAVGAFVPL 143
           SMAIGEFVSVYSQ DIE AQ+KR       NI +K+ LPNP  AA ASA+AF++GA VPL
Sbjct: 329 SMAIGEFVSVYSQLDIEIAQLKRDNIERGNNIEEKESLPNPLQAAAASALAFSIGAMVPL 508

Query: 144 LGAAFVKDYKVRLGVVVGVV 163
           L A+F+KDYKVR+GVV+G V
Sbjct: 509 LAASFIKDYKVRVGVVLGAV 568


>TC82329 similar to SP|Q01371|WC1_NEUCR White collar 1 protein (WC1).
           {Neurospora crassa}, partial (12%)
          Length = 590

 Score = 27.7 bits (60), Expect = 3.4
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +2

Query: 6   HHHAATLA-RSESKVYNMDVEKKGEEENDEKDYTQRAQWLRAAVLGANDGL------LST 58
           H HA T A R   +V++    +KG+E  D     + +Q  R    GAND L       S 
Sbjct: 128 HKHAGTHATRKPGRVWSR--HRKGQEGQDSNMQARGSQPQRTGAPGANDSLPGGRCRRSK 301

Query: 59  ASLMMGVGAVTK 70
           A +++G    +K
Sbjct: 302 AHVLVGTDEASK 337


>CA917904 homologue to GP|19717681|gb| arsenite transport subunit B
           {Dictyostelium discoideum}, partial (2%)
          Length = 750

 Score = 27.3 bits (59), Expect = 4.4
 Identities = 10/29 (34%), Positives = 18/29 (61%)
 Frame = +3

Query: 6   HHHAATLARSESKVYNMDVEKKGEEENDE 34
           HHH   + +++ +  ++ +  KGEEE DE
Sbjct: 240 HHHHRIIKQNKKERIHIKIVDKGEEEKDE 326


>TC84315 similar to GP|11876272|emb|CAC18917. unnamed protein product
           {Glycine max}, partial (49%)
          Length = 811

 Score = 26.6 bits (57), Expect = 7.5
 Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 2/132 (1%)
 Frame = +2

Query: 56  LSTASLMMGVGAVTKDVKTMILTGIAGLVAGACSMAIGEFVSVYSQYDIEFAQMKRQGNI 115
           LS  S+ +       D+  +  TG+   V  A  M I   V +    D+E          
Sbjct: 476 LSIISVSLLAAEKLSDISPLFFTGVLEAVVAALFMNI-YIVGLNQLSDVEI--------- 625

Query: 116 SQKDKLPNPYYAAFASAIAFAVGAFVPLLGAAFVKDYKVRLGVVVGVVSLALFG--FGLL 173
              DK+  PY    +   +FA GA + +  +            V G+  L + G  FGL 
Sbjct: 626 ---DKINKPYLPLASGEYSFATGAIIGVSSSF----------*VFGLPGL*VHGHCFGLF 766

Query: 174 SAVLGKAPLVKS 185
           S+VL    L+ S
Sbjct: 767 SSVLC*GRLIPS 802


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.135    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,125,521
Number of Sequences: 36976
Number of extensions: 50685
Number of successful extensions: 268
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of query: 212
length of database: 9,014,727
effective HSP length: 92
effective length of query: 120
effective length of database: 5,612,935
effective search space: 673552200
effective search space used: 673552200
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)