BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136472.12 - phase: 0 /pseudo
(346 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC80316 144 7e-35
TC88073 weakly similar to GP|5777632|emb|CAB53493.1 CAA303720.1 ... 125 2e-29
BG583743 weakly similar to GP|11761475|gb| MtN21 nodulin protein... 91 5e-19
TC91330 weakly similar to PIR|A84793|A84793 nodulin-like protein... 90 1e-18
TC91436 weakly similar to GP|21593499|gb|AAM65466.1 putative nod... 88 4e-18
TC77062 similar to GP|20259307|gb|AAM14389.1 putative nodulin pr... 87 9e-18
TC78291 weakly similar to PIR|A84793|A84793 nodulin-like protein... 87 1e-17
TC86057 similar to GP|15146330|gb|AAK83648.1 At1g44800/T12C22_7 ... 83 1e-16
TC80043 similar to GP|9759561|dbj|BAB11163.1 MtN21 nodulin prote... 82 2e-16
TC79252 MtN21 82 3e-16
TC86162 similar to GP|2598575|emb|CAA75575.1 MtN21 {Medicago tru... 81 5e-16
BF646719 81 7e-16
TC77897 similar to GP|5262203|emb|CAB45800.1 nodulin-like protei... 80 9e-16
TC87800 weakly similar to GP|13899061|gb|AAK48952.1 Medicago nod... 78 6e-15
TC87886 weakly similar to GP|5262202|emb|CAB45799.1 nodulin-like... 77 1e-14
BG580417 69 3e-12
TC77745 weakly similar to GP|11994131|dbj|BAB01133. nodulin-like... 68 6e-12
AL369248 weakly similar to GP|19347832|gb| unknown protein {Arab... 68 6e-12
TC79083 weakly similar to GP|10177510|dbj|BAB10904. nodulin-like... 67 1e-11
TC89263 similar to GP|16974593|gb|AAL31201.1 AT4g19180/T18B16_15... 65 3e-11
>TC80316
Length = 547
Score = 144 bits (362), Expect = 7e-35
Identities = 69/69 (100%), Positives = 69/69 (100%)
Frame = +2
Query: 278 GLYAVVWGKSKEMKKKNQLVPSKNPHEFDPVEIVVRSIEKDKSNLNNNNQMVKDNEDSQT 337
GLYAVVWGKSKEMKKKNQLVPSKNPHEFDPVEIVVRSIEKDKSNLNNNNQMVKDNEDSQT
Sbjct: 5 GLYAVVWGKSKEMKKKNQLVPSKNPHEFDPVEIVVRSIEKDKSNLNNNNQMVKDNEDSQT 184
Query: 338 DEHEQQSQE 346
DEHEQQSQE
Sbjct: 185 DEHEQQSQE 211
>TC88073 weakly similar to GP|5777632|emb|CAB53493.1 CAA303720.1 protein
{Oryza sativa}, partial (25%)
Length = 1345
Score = 125 bits (315), Expect = 2e-29
Identities = 62/105 (59%), Positives = 80/105 (76%)
Frame = +2
Query: 213 SVAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGA 272
++AY+GIVVSG++V VISWC+ MRGPLF SVF PL LL+VA+ L+EKL+ GS+ GA
Sbjct: 524 TMAYSGIVVSGSVVIVISWCIRMRGPLFVSVFNPLQLLLVAVFAYLFLDEKLYFGSVFGA 703
Query: 273 VLIVCGLYAVVWGKSKEMKKKNQLVPSKNPHEFDPVEIVVRSIEK 317
VLIVCGLYAV+W K EMKKK QL+ K E + VE+V+ + +K
Sbjct: 704 VLIVCGLYAVLWSKGIEMKKKTQLLSLKIKVENEAVELVLSNPDK 838
Score = 53.9 bits (128), Expect = 9e-08
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +1
Query: 92 GIISSKLLLTSPDFNFSNICIRNGQPYTSCNLYHGCFLRYGKIEFENKSREGKDIRYTNR 151
G SK L P F+FSN+ + + QPY+ L+HG + GK + +G+ R +N
Sbjct: 1 GKFISKPLWRCPRFDFSNVYVVHVQPYSRNYLHHGHICQIGKAKLGISRGKGQSNRNSNW 180
Query: 152 NWWGNGIDIR*RC*N*DGIIPFKSFTSS---KWC--CNTHYLHC*YHFGFSMC 199
+WWGN DI R N* + ++ + + KW T L *Y G SMC
Sbjct: 181 HWWGNAYDILQRSGN*YLVFQYQPYAPT*EPKWAYGSKT*GLQ**YS-GCSMC 336
>BG583743 weakly similar to GP|11761475|gb| MtN21 nodulin protein putative
{Arabidopsis thaliana}, partial (11%)
Length = 831
Score = 91.3 bits (225), Expect = 5e-19
Identities = 46/98 (46%), Positives = 63/98 (63%)
Frame = +3
Query: 3 MKNNLCNVVQGLKPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPI 62
MK +CN +QGLKP +LMV+ QIAFA VN++YKL +NDGMS+R+ AYR FA AF P+
Sbjct: 249 MKRIICNSLQGLKPVVLMVVCQIAFAAVNIMYKLVINDGMSMRVATAYRLSFAAAFTVPL 428
Query: 63 AFILERLQEEEGKDDLDNTVSVISMRFIWGIISSKLLL 100
A +R ++ + T V+ M F+ G+ LLL
Sbjct: 429 AVYFDRKKKPK------ITWKVLYMTFLCGLFGGSLLL 524
Score = 67.8 bits (164), Expect = 6e-12
Identities = 47/118 (39%), Positives = 62/118 (51%), Gaps = 3/118 (2%)
Frame = +2
Query: 71 EEEGKDDLDNTVSVISMRFIWGIISSKLLLTSPDFNFSNICIRNGQPYTSCNLYHGCFLR 130
EEE KD L+ ++ IS+ +WG +SK L DF FSN+ QPY+ L+HG LR
Sbjct: 446 EEETKDYLEGSLYDISLWIVWGKFTSKPLWHGTDFYFSNVYDVIVQPYSRSYLHHGHILR 625
Query: 131 YGKIEFENKSREGKDIRYTNRNWWGNGIDIR*RC*N*DGIIPFK--SFTS-SKWCCNT 185
GK + R+ + R N + WGNG DI R N* +K +FTS KW T
Sbjct: 626 IGKAKLGISRRKSQGNRNNN*HQWGNGDDILQRSRN*YLDFQYKPYAFTS*PKWTYGT 799
>TC91330 weakly similar to PIR|A84793|A84793 nodulin-like protein [imported]
- Arabidopsis thaliana, partial (34%)
Length = 812
Score = 89.7 bits (221), Expect = 1e-18
Identities = 48/127 (37%), Positives = 75/127 (58%), Gaps = 4/127 (3%)
Frame = +3
Query: 212 YSVAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIG 271
++ AYAGIV SG + + GP+ + F P+ +++V C IL+E+L LGSIIG
Sbjct: 210 FAPAYAGIVTSGVQYYIQGLVIKTMGPVIVTAFNPVRMIIVTALACIILSEQLFLGSIIG 389
Query: 272 AVLIVCGLYAVVWGKSKEMKKKNQL----VPSKNPHEFDPVEIVVRSIEKDKSNLNNNNQ 327
A+++V GLY VVWGKSKE K +N + P+K D + + + +++SN N Q
Sbjct: 390 AIVVVLGLYLVVWGKSKEYKARNHVDMPPSPTKEDSLQDQQQQLPVTAPRNESNDINKAQ 569
Query: 328 MVKDNED 334
+V +E+
Sbjct: 570 LVIHSEE 590
>TC91436 weakly similar to GP|21593499|gb|AAM65466.1 putative nodulin
protein N21 {Arabidopsis thaliana}, partial (16%)
Length = 909
Score = 88.2 bits (217), Expect = 4e-18
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +3
Query: 213 SVAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGA 272
S YAGI+ +G +ISW + +GPL+ SVFTPL L++ A L EKL++G+ +G+
Sbjct: 279 SSLYAGIICTGLSYCIISWTIERKGPLYVSVFTPLQLIITAFISWAFLREKLYVGTALGS 458
Query: 273 VLIVCGLYAVVWGKSKEM 290
+LIV GLY+V+WGKSKE+
Sbjct: 459 LLIVGGLYSVLWGKSKEV 512
>TC77062 similar to GP|20259307|gb|AAM14389.1 putative nodulin protein
{Arabidopsis thaliana}, partial (81%)
Length = 1631
Score = 87.0 bits (214), Expect = 9e-18
Identities = 39/85 (45%), Positives = 57/85 (66%)
Frame = +2
Query: 212 YSVAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIG 271
+++ YAG+V SG AV WC+ GP+F +V+ P+ L+VA+ L E+ +LG IIG
Sbjct: 947 FTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIG 1126
Query: 272 AVLIVCGLYAVVWGKSKEMKKKNQL 296
AVLI+ GLY V+WGK++E K +L
Sbjct: 1127 AVLIIVGLYLVLWGKNEEKKFAREL 1201
Score = 38.5 bits (88), Expect(2) = 9e-04
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +2
Query: 8 CNVVQGLKPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIAFILE 67
C++ + + M+ +Q +AG +V+ + A+N G+S + YR I A + P A+ LE
Sbjct: 164 CSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLE 343
Query: 68 R 68
+
Sbjct: 344 K 346
Score = 21.2 bits (43), Expect(2) = 9e-04
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 106 NFSNICIRNGQPYTSCNLYHGCFL--RYGKIEFENKSREG 143
+ SN+CI + TS + HG R G +E + +R+G
Sbjct: 451 HISNLCISYTEFCTSHYICHGSHTQNRKGAVEQKGWNRKG 570
>TC78291 weakly similar to PIR|A84793|A84793 nodulin-like protein [imported]
- Arabidopsis thaliana, partial (54%)
Length = 1466
Score = 86.7 bits (213), Expect = 1e-17
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Frame = +1
Query: 212 YSVAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIG 271
++ YAGIV S V + GP+F + F PL +++V C +L+EKLHLGSI+G
Sbjct: 868 FASVYAGIVTSAIQFYVQGSVIKTMGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIVG 1047
Query: 272 AVLIVCGLYAVVWGKSKEMKKKNQLVPSKNPHEFDP--VEIVVRSIEKDKSNLNNNNQMV 329
V++V GLY VVWGKSKE K ++ ++P + + + ++ K +N +N Q++
Sbjct: 1048GVVVVTGLYLVVWGKSKEQK---AMMSDESPQKISQQGQQQLPITVPKIDNNEDNKPQLI 1218
Query: 330 KDNEDSQTDE 339
+ + T++
Sbjct: 1219IIEDQTSTEK 1248
Score = 45.8 bits (107), Expect = 2e-05
Identities = 26/54 (48%), Positives = 33/54 (60%)
Frame = +1
Query: 15 KPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIAFILER 68
K LL++ +Q AG+ VL A+N GMS I V YR + AT +AP AF LER
Sbjct: 136 KSYLLILSLQFGSAGMYVLTMDALNKGMSHYIFVVYRNVIATIALAPFAFFLER 297
>TC86057 similar to GP|15146330|gb|AAK83648.1 At1g44800/T12C22_7
{Arabidopsis thaliana}, partial (80%)
Length = 1476
Score = 83.2 bits (204), Expect = 1e-16
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Frame = +1
Query: 216 YAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGAVLI 275
Y+GIV SG V RGP+F + F+PL +++ A G +L E+ HLGSIIGA++I
Sbjct: 901 YSGIVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQTHLGSIIGAIII 1080
Query: 276 VCGLYAVVWGKSKEM-------KKKNQLVPSKN 301
VCGLY VVWGKSK+ K + Q +P K+
Sbjct: 1081VCGLYTVVWGKSKDSVNTIDAPKSEGQELPIKD 1179
Score = 48.9 bits (115), Expect(2) = 7e-07
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 14 LKPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIAFILER 68
+KP L MV +Q +AG+ ++ ++ GMS ++ YR + AT F+AP A +LER
Sbjct: 163 IKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVIATIFMAPFALVLER 327
Score = 21.6 bits (44), Expect(2) = 7e-07
Identities = 16/65 (24%), Positives = 27/65 (40%)
Frame = +3
Query: 96 SKLLLTSPDFNFSNICIRNGQPYTSCNLYHGCFLRYGKIEFENKSREGKDIRYTNRNWWG 155
SK + + + +N+CI + S Y+G + E S+ KD ++
Sbjct: 402 SKFVQLGNEEHLNNVCICHC*HSASNYFYNGNHFQVRNS*LEKNSQHSKDSWNSSNCIRS 581
Query: 156 NGIDI 160
NG DI
Sbjct: 582 NGYDI 596
>TC80043 similar to GP|9759561|dbj|BAB11163.1 MtN21 nodulin protein-like
{Arabidopsis thaliana}, partial (28%)
Length = 1421
Score = 82.4 bits (202), Expect = 2e-16
Identities = 39/75 (52%), Positives = 55/75 (73%)
Frame = +2
Query: 218 GIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGAVLIVC 277
GI+ SG V + +GP+F + F+PLM+++VA+ G IL EKL+LG +IGA+LIV
Sbjct: 227 GIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGTFILAEKLYLGGVIGAILIVI 406
Query: 278 GLYAVVWGKSKEMKK 292
GLY+V+WGKSKE K+
Sbjct: 407 GLYSVLWGKSKENKE 451
>TC79252 MtN21
Length = 1872
Score = 82.0 bits (201), Expect = 3e-16
Identities = 38/77 (49%), Positives = 56/77 (72%)
Frame = +3
Query: 213 SVAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGA 272
+ AYAGIV S + + +GP+FA+ F+PLM+++VA+ G IL E+L LGS+IG+
Sbjct: 1002 AAAYAGIVTSSISYYIQGLVIKKKGPVFATSFSPLMMIIVAIMGFFILAEQLFLGSVIGS 1181
Query: 273 VLIVCGLYAVVWGKSKE 289
+L+V GLY+V+WGK KE
Sbjct: 1182 ILVVIGLYSVLWGKHKE 1232
Score = 57.8 bits (138), Expect = 6e-09
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Frame = +3
Query: 15 KPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIAFILERLQEEEG 74
KP M+++Q +AG+N++ KL++N GMS ++V YR FAT IAP A I E +++
Sbjct: 270 KPYFAMILLQFGYAGMNIITKLSLNGGMSHYVLVVYRHAFATIAIAPFAIIFE--WKDQP 443
Query: 75 KDDLDNTVSVISMRFIWGIISSK-----LLLTSPDFN 106
K + ++ + + +I L LTSP F+
Sbjct: 444 KITFSVFMQILLLALLGPVIDQNFYYAGLKLTSPTFS 554
Score = 30.0 bits (66), Expect = 1.4
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 89 FIWGIISSKLLLTSPDFNFSNICIRNGQPYTSCNLYHGCFLRYGKIEFENKSREGK-DIR 147
F W SKLLL + N NI + N Q +S + G ++ G + E K D
Sbjct: 485 FAWASDRSKLLLCWVEINIPNILMCNEQHASSYDFCDGGVMQDGNSQLEEVKMPSKGDWN 664
Query: 148 YTNRNWWGNGIDI 160
+ N WGN D+
Sbjct: 665 HFNCG-WGNVDDL 700
>TC86162 similar to GP|2598575|emb|CAA75575.1 MtN21 {Medicago truncatula},
partial (80%)
Length = 1522
Score = 81.3 bits (199), Expect = 5e-16
Identities = 45/119 (37%), Positives = 71/119 (58%), Gaps = 4/119 (3%)
Frame = +2
Query: 215 AYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGAVL 274
AYAGIV S V + +GP+FA+ F+PLM+++VA+ G IL E+++ G ++GA+L
Sbjct: 887 AYAGIVTSSLAYYVQGLVIRKKGPVFATAFSPLMMIIVAIMGSFILAEQIYSGGVMGAIL 1066
Query: 275 IVCGLYAVVWGKSK---EMKKKNQLVPSKNPHEFDPVEIVVRSIEKDK-SNLNNNNQMV 329
IV GLY+V+WGK K E K + +P K P +V+ ++ K + + N M+
Sbjct: 1067 IVIGLYSVLWGKHKEEIERKVDDIPLPIKGPQMSGNSGLVIDDTDQVKHGQVEDTNNML 1243
Score = 57.8 bits (138), Expect = 6e-09
Identities = 37/113 (32%), Positives = 56/113 (48%)
Frame = +2
Query: 9 NVVQGLKPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIAFILER 68
N + +K M+ +Q +AG+N++ K+++N GMS ++V YR FATA IAP AF+ ER
Sbjct: 122 NSFENMKHYTAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATASIAPFAFMFER 301
Query: 69 LQEEEGKDDLDNTVSVISMRFIWGIISSKLLLTSPDFNFSNICIRNGQPYTSC 121
+ + I+ R I LL D NF ++ P SC
Sbjct: 302 KGQPK-----------ITFRIFLQIFVLALLGPVIDQNFYYAGLKLTSPTFSC 427
Score = 31.2 bits (69), Expect = 0.61
Identities = 24/94 (25%), Positives = 41/94 (43%)
Frame = +1
Query: 70 QEEEGKDDLDNTVSVISMRFIWGIISSKLLLTSPDFNFSNICIRNGQPYTSCNLYHGCFL 129
+E D++ N ++ W SK LL + + N+ + N Q +S + G F+
Sbjct: 298 EERST*DNIPNFLANFRPSSSWASD*SKFLLCWVEAHIPNLLLCNEQRASSHDFCDGSFM 477
Query: 130 RYGKIEFENKSREGKDIRYTNRNWWGNGIDIR*R 163
+ G+ + + KDI + W N DI *R
Sbjct: 478 QDGEDKHKASEMPSKDIGNNFDSGWCNANDII*R 579
>BF646719
Length = 419
Score = 80.9 bits (198), Expect = 7e-16
Identities = 42/85 (49%), Positives = 57/85 (66%)
Frame = +1
Query: 9 NVVQGLKPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIAFILER 68
N V GLKP +LMV+VQIA+A VNVLYKLA+NDGM++++ AYR F +AF P+A I ER
Sbjct: 82 NGVHGLKPVILMVLVQIAYAAVNVLYKLAINDGMTVKVATAYRLAFGSAFTXPLALISER 261
Query: 69 LQEEEGKDDLDNTVSVISMRFIWGI 93
+ + T V+ M F+ G+
Sbjct: 262 NKRPK------LTWRVLFMAFLXGL 318
>TC77897 similar to GP|5262203|emb|CAB45800.1 nodulin-like protein
{Arabidopsis thaliana}, partial (77%)
Length = 1455
Score = 80.5 bits (197), Expect = 9e-16
Identities = 48/124 (38%), Positives = 70/124 (55%), Gaps = 15/124 (12%)
Frame = +2
Query: 216 YAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGAVLI 275
Y+G++ SG V RGP+F + F+PL +++ A G +L E++HLGSI GA++I
Sbjct: 869 YSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAIII 1048
Query: 276 VCGLYAVVWGKSKEMKK----------KNQLVPSKNPHE-----FDPVEIVVRSIEKDKS 320
V GLY VVWGKSK+ ++ K+QL P KN + FD +EI V + + K
Sbjct: 1049VIGLYTVVWGKSKDRRESADEIGKGESKDQL-PIKNGTKSGSEIFDGIEINVPAEKLKKG 1225
Query: 321 NLNN 324
N
Sbjct: 1226EAKN 1237
Score = 42.4 bits (98), Expect = 3e-04
Identities = 24/95 (25%), Positives = 50/95 (52%)
Frame = +2
Query: 4 KNNLCNVVQGLKPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIA 63
K N +++ +KP L ++ +Q ++G+ ++ ++ GMS I+ YR + A I P A
Sbjct: 95 KLNKGALLRKIKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIITPFA 274
Query: 64 FILERLQEEEGKDDLDNTVSVISMRFIWGIISSKL 98
+LER + K L + ++++ F+ ++ L
Sbjct: 275 LVLER--KTRPKMTLPIFLRIVALGFLEPVLDQNL 373
>TC87800 weakly similar to GP|13899061|gb|AAK48952.1 Medicago nodulin
N21-like protein {Arabidopsis thaliana}, partial (41%)
Length = 1377
Score = 77.8 bits (190), Expect = 6e-15
Identities = 36/118 (30%), Positives = 69/118 (57%)
Frame = +3
Query: 216 YAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGAVLI 275
YAGI ++ + + SWC+ RGPL+ +F PL ++ AL L E+L++GS++GA +
Sbjct: 870 YAGIGIAASFF-IQSWCISRRGPLYCVMFNPLATVITALVSAIFLQEELYIGSLVGAFGV 1046
Query: 276 VCGLYAVVWGKSKEMKKKNQLVPSKNPHEFDPVEIVVRSIEKDKSNLNNNNQMVKDNE 333
+ GLY V+WGK+K+ + Q +P + D + ++ ++ L + ++ V +++
Sbjct: 1047ISGLYIVLWGKAKDFDETKQELPQSQMQDDD----ISNRVDLEEPLLTDKSEYVAESK 1208
Score = 33.5 bits (75), Expect = 0.12
Identities = 16/54 (29%), Positives = 31/54 (56%)
Frame = +3
Query: 11 VQGLKPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIAF 64
+ G P ++M+ +Q ++ + + + A+ DG++ + V YR AT +API F
Sbjct: 120 LDGYFPVMVMIGLQFHYSLLAIFTRAALLDGLTPTVFVVYRQGIATLALAPIIF 281
>TC87886 weakly similar to GP|5262202|emb|CAB45799.1 nodulin-like protein
{Arabidopsis thaliana}, partial (79%)
Length = 1337
Score = 77.0 bits (188), Expect = 1e-14
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = +3
Query: 212 YSVAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIG 271
Y Y GIV SG V + RGP+F + F PL +++ G + E+LHLGSIIG
Sbjct: 828 YGPLYTGIVTSGITYYVQGLVLQSRGPVFYTAFNPLCMIITCALGSFLFAEQLHLGSIIG 1007
Query: 272 AVLIVCGLYAVVWGKSKEMKKKNQLVP 298
A++I GLY+VVWGK+K+ +P
Sbjct: 1008ALIIAVGLYSVVWGKAKDYLSDTTTLP 1088
Score = 43.1 bits (100), Expect = 2e-04
Identities = 22/67 (32%), Positives = 34/67 (49%)
Frame = +3
Query: 2 MMKNNLCNVVQGLKPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAP 61
M K + N + +P +L V +Q FAG + + N GM+ + + YR + A +AP
Sbjct: 60 MEKIGVANKMNKARPYVLTVALQFGFAGAYIFSMASFNMGMNRFVFIVYRNVIAAIALAP 239
Query: 62 IAFILER 68
A I ER
Sbjct: 240 FALIFER 260
>BG580417
Length = 390
Score = 68.6 bits (166), Expect = 3e-12
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Frame = +1
Query: 6 NLCNV--VQGLKPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIA 63
NL NV ++ +KP +LM++VQ +A VN++ K+ NDG SL +++AYRF+F+TAF P A
Sbjct: 16 NLFNVEAIESVKPVVLMIVVQSIYAVVNIMLKMVTNDGSSLSVLIAYRFVFSTAFTVPFA 195
Query: 64 FILER 68
ER
Sbjct: 196LFFER 210
>TC77745 weakly similar to GP|11994131|dbj|BAB01133. nodulin-like protein
{Arabidopsis thaliana}, partial (19%)
Length = 1215
Score = 67.8 bits (164), Expect = 6e-12
Identities = 30/78 (38%), Positives = 44/78 (55%)
Frame = +3
Query: 214 VAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGAV 273
+ Y + G + +W V GPLF ++F P+ ++ G L + +LGS+IGAV
Sbjct: 846 ILYQAVAAIGIRYFLQTWSVQRAGPLFCAMFKPIGIIFTVFLGSIFLGDDFYLGSLIGAV 1025
Query: 274 LIVCGLYAVVWGKSKEMK 291
+IV G YAV WGK+ E K
Sbjct: 1026IIVVGFYAVQWGKASEEK 1079
>AL369248 weakly similar to GP|19347832|gb| unknown protein {Arabidopsis
thaliana}, partial (17%)
Length = 443
Score = 67.8 bits (164), Expect = 6e-12
Identities = 28/62 (45%), Positives = 43/62 (69%)
Frame = -2
Query: 228 VISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGAVLIVCGLYAVVWGKS 287
V +W +H++G ++ + F PL +++ G L + LHLGSIIGA++I GLYAV+WGK+
Sbjct: 403 VSAWAIHLKGAVYVTSFKPLQIVISVWLGVIFLGDTLHLGSIIGAIIISIGLYAVLWGKA 224
Query: 288 KE 289
E
Sbjct: 223 TE 218
>TC79083 weakly similar to GP|10177510|dbj|BAB10904. nodulin-like protein
{Arabidopsis thaliana}, partial (31%)
Length = 1256
Score = 67.0 bits (162), Expect = 1e-11
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 213 SVAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGA 272
SV Y+ V + +W +GP++ ++F PL +++ G L + L+LGS+IGA
Sbjct: 719 SVCYSATFVESLKNVIQTWACRKKGPIYVAMFKPLRVVIALSMGVIFLGDNLYLGSMIGA 898
Query: 273 VLIVCGLYAVVWGKSKE---MKKKNQLVPSKNP 302
+IV G YAV+W K++E + N L S P
Sbjct: 899 AIIVIGFYAVIWAKAQEEHTTSENNLLSSSSTP 997
>TC89263 similar to GP|16974593|gb|AAL31201.1 AT4g19180/T18B16_150
{Arabidopsis thaliana}, partial (77%)
Length = 1305
Score = 65.5 bits (158), Expect = 3e-11
Identities = 31/86 (36%), Positives = 45/86 (52%)
Frame = +1
Query: 213 SVAYAGIVVSGAMVAVISWCVHMRGPLFASVFTPLMLLMVALAGCTILNEKLHLGSIIGA 272
+V YAGI+ S +I+WC + GP +++ PL AL L ++LGSIIG
Sbjct: 967 AVIYAGIIASALNYGLITWCNKILGPALVALYNPLQPAFSALLSRMFLGSPIYLGSIIGR 1146
Query: 273 VLIVCGLYAVVWGKSKEMKKKNQLVP 298
I+ GLY V WG +E ++P
Sbjct: 1147 SFIIAGLYTVTWGSYRERHATVGVIP 1224
Score = 42.0 bits (97), Expect = 3e-04
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +3
Query: 15 KPTLLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFIFATAFIAPIAFILER 68
K L M MVQ+ G +V+ K+A+N G++ + YR + A + +APIA+I E+
Sbjct: 198 KAHLAMAMVQLFNGGYHVITKVALNVGVNQLVFCLYRDLLALSILAPIAYIREK 359
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.334 0.145 0.470
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,566,632
Number of Sequences: 36976
Number of extensions: 180411
Number of successful extensions: 1834
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1832
length of query: 346
length of database: 9,014,727
effective HSP length: 97
effective length of query: 249
effective length of database: 5,428,055
effective search space: 1351585695
effective search space used: 1351585695
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC136472.12