BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136472.10 + phase: 0
(427 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77818 similar to GP|21644661|dbj|BAC01219. putative tubby prot... 693 0.0
TC77824 similar to GP|11067277|gb|AAG28805.1 unknown protein {Ar... 548 e-156
TC86703 similar to GP|18377640|gb|AAL66970.1 putative tubby prot... 430 e-121
TC88021 similar to GP|7635492|emb|CAB88665.1 tubby-like protein ... 368 e-102
TC77823 similar to GP|11067277|gb|AAG28805.1 unknown protein {Ar... 359 1e-99
TC78676 similar to GP|18252343|gb|AAL66203.1 putative Tub family... 290 7e-79
TC78677 similar to GP|18377640|gb|AAL66970.1 putative tubby prot... 154 2e-70
TC82140 similar to PIR|E96513|E96513 unknown protein 3155-1759 ... 213 1e-55
TC86942 homologue to GP|7635492|emb|CAB88665.1 tubby-like protei... 212 3e-55
TC90967 similar to GP|16323400|gb|AAL15194.1 unknown protein {Ar... 122 3e-53
AL383114 homologue to GP|7635492|emb| tubby-like protein {Cicer ... 128 5e-30
BG583821 homologue to GP|16323400|gb| unknown protein {Arabidops... 97 1e-21
AW691999 similar to GP|22654973|gb| At1g76900/F7O12_7 {Arabidops... 57 1e-16
BE998322 similar to GP|7635492|emb| tubby-like protein {Cicer ar... 57 2e-08
BG647908 similar to GP|22654973|gb| At1g76900/F7O12_7 {Arabidops... 56 2e-08
TC91391 weakly similar to GP|21427473|gb|AAM53249.1 actin-relate... 33 0.27
TC80014 weakly similar to GP|21536784|gb|AAM61116.1 unknown {Ara... 32 0.47
BQ141543 weakly similar to GP|6523547|emb| hydroxyproline-rich g... 30 1.4
TC83652 similar to GP|3273101|emb|CAA76808.1 N7 protein {Medicag... 30 2.3
TC89058 similar to GP|19071218|gb|AAL84162.1 putative heavy meta... 30 2.3
>TC77818 similar to GP|21644661|dbj|BAC01219. putative tubby protein {Oryza
sativa (japonica cultivar-group)}, partial (85%)
Length = 1982
Score = 693 bits (1788), Expect = 0.0
Identities = 350/435 (80%), Positives = 382/435 (87%), Gaps = 8/435 (1%)
Frame = +1
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE 60
MSFRSIVRDVRD FGSLSRRSF+V+L GH RGKS SV +LHDQP VIQNS WA+LPPE
Sbjct: 331 MSFRSIVRDVRDGFGSLSRRSFEVRLPGHQ-RGKSRSSVHELHDQPPVIQNSPWASLPPE 507
Query: 61 LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP 120
LL DVI+RLE +E+TWP RKHVVACA+VC+SWR MCK+IV S E+CGK+TFPVSLKQPG
Sbjct: 508 LLRDVIKRLEATESTWPGRKHVVACAAVCKSWREMCKEIVNSLEYCGKITFPVSLKQPGY 687
Query: 121 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 180
RDG IQCFIKRDKS LTYHLFLCLSPALLVENGKFLLSAKRTRRTT TEYVISMDADNIS
Sbjct: 688 RDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNIS 867
Query: 181 RSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVPSGSYN 239
RSSNTYIGKLRSNFLGTKFIIYDTQPP +A + PPG SRRF SKKVSPKVPSGSYN
Sbjct: 868 RSSNTYIGKLRSNFLGTKFIIYDTQPPYNNAQLAPPG---RSRRFNSKKVSPKVPSGSYN 1038
Query: 240 IAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSISFSKS 299
IAQVTYELNVLGTRGPR+M+C MHSIP S+L+ GG VPGQPEL+ R+LEDSFRS+SF++S
Sbjct: 1039IAQVTYELNVLGTRGPRRMNCTMHSIPASSLEPGGLVPGQPELVPRNLEDSFRSLSFARS 1218
Query: 300 LDHSIEFSSARFSEIGGSCNED-DDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASV 358
+D+S EFSS RFS+I G+ NED ++GK RPLVLKNK PRWHEQLQCWCLNFRGRVTVASV
Sbjct: 1219IDNSTEFSSCRFSDIMGAGNEDEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASV 1398
Query: 359 KNFQLIASTQP------PAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQA 412
KNFQLIA+ QP A P PSQPA +HDKIILQFGKVGKDMFTMDYRYPLSAFQA
Sbjct: 1399KNFQLIAAAQPAPVAPHAATGPAPSQPAQSDHDKIILQFGKVGKDMFTMDYRYPLSAFQA 1578
Query: 413 FAICLSSFDTKLACE 427
FAICL+SFDTKLACE
Sbjct: 1579FAICLTSFDTKLACE 1623
>TC77824 similar to GP|11067277|gb|AAG28805.1 unknown protein {Arabidopsis
thaliana}, partial (50%)
Length = 1132
Score = 548 bits (1412), Expect = e-156
Identities = 264/264 (100%), Positives = 264/264 (100%)
Frame = +3
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE 60
MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE
Sbjct: 339 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE 518
Query: 61 LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP 120
LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP
Sbjct: 519 LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP 698
Query: 121 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 180
RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS
Sbjct: 699 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 878
Query: 181 RSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNI 240
RSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNI
Sbjct: 879 RSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNI 1058
Query: 241 AQVTYELNVLGTRGPRKMHCIMHS 264
AQVTYELNVLGTRGPRKMHCIMHS
Sbjct: 1059AQVTYELNVLGTRGPRKMHCIMHS 1130
>TC86703 similar to GP|18377640|gb|AAL66970.1 putative tubby protein
{Arabidopsis thaliana}, partial (84%)
Length = 1868
Score = 430 bits (1106), Expect = e-121
Identities = 229/432 (53%), Positives = 300/432 (69%), Gaps = 5/432 (1%)
Frame = +2
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLT-GHHHRGKSHGSVQDLHDQPLVIQN----SCWA 55
MSFRS++ D R+ FDVK G R +SH V + D LVI + SCWA
Sbjct: 317 MSFRSMIMD---------RKGFDVKFGYGMRSRSQSHCDVNVIADGALVIDDGLSQSCWA 469
Query: 56 NLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSL 115
N+P ELL DV+ R+E S++TWP+RK+VVACA VC+SWR + K++V+ P+ KLTFPV+L
Sbjct: 470 NMPHELLRDVLMRIEVSDDTWPTRKNVVACAGVCRSWREIVKELVKPPQLSSKLTFPVNL 649
Query: 116 KQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMD 175
KQPGPR +IQC+IKR++ + Y+LFL L+ A ++GKFLL+A++ RR T+T+Y+IS++
Sbjct: 650 KQPGPRGSLIQCYIKRNRGDQIYYLFLSLNQA-STDDGKFLLAARKCRRATHTDYIISLN 826
Query: 176 ADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFSKKVSPKVPS 235
D++SR S+TY+GKLRSNFLGTKF +YD PP +T+R K+VSP+VP+
Sbjct: 827 LDDVSRRSSTYVGKLRSNFLGTKFTVYDAHPPVYGDRF---AKSRTTRLSLKQVSPRVPA 997
Query: 236 GSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSIS 295
G+Y I V+Y+LNVLG+RGPR M C+M +IP SA++ GG P Q + +H S D+ SI
Sbjct: 998 GNYPIVHVSYDLNVLGSRGPRIMQCVMDAIPASAVEPGGVAPTQTQFLH-SRADTSPSIP 1174
Query: 296 FSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTV 355
F +S E + I +DG+ LVLKNK PRWHEQLQCWCLNF GRVTV
Sbjct: 1175FFRSKSTRSENLQSAAPLI-----SQNDGE---LVLKNKAPRWHEQLQCWCLNFNGRVTV 1330
Query: 356 ASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 415
ASVKNFQL+AS P G +Q + +ILQFGKVGKD+FTMDY+YP+SAF+AFAI
Sbjct: 1331ASVKNFQLVAS--PKNGVSEEAQ------ENVILQFGKVGKDVFTMDYQYPISAFEAFAI 1486
Query: 416 CLSSFDTKLACE 427
CLSSFDTK+ACE
Sbjct: 1487CLSSFDTKIACE 1522
>TC88021 similar to GP|7635492|emb|CAB88665.1 tubby-like protein {Cicer
arietinum}, partial (81%)
Length = 1540
Score = 368 bits (944), Expect = e-102
Identities = 214/423 (50%), Positives = 279/423 (65%), Gaps = 7/423 (1%)
Frame = +3
Query: 1 MSFRSIVRDV---RDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLV-IQNSCWAN 56
MS RSIVR++ RD G+ SRR V R KSH V D+ L IQ WAN
Sbjct: 258 MSLRSIVRELKEMRDGIGNTSRRG--VASRHSQRRTKSH-IVPDITLTSLEPIQQGQWAN 428
Query: 57 LPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLK 116
+P ELL D+IRR+EE+E +WP+R VV+CASVC+SWR + ++IV++PE CG+LTFP+SLK
Sbjct: 429 IPSELLLDIIRRVEETETSWPARAVVVSCASVCKSWRAVTQEIVQTPEECGRLTFPISLK 608
Query: 117 QPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDA 176
QPGPRD IQCFI+RD+ Y L+ L P+ E K LL+AK+ RR T T+++IS+ A
Sbjct: 609 QPGPRDSPIQCFIRRDRETSAYLLYYGLVPS-ENETDKLLLAAKKIRRATGTDFIISLVA 785
Query: 177 DNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVPS 235
D+ SRSSN Y+GKLRSNFLGTKF IYD+QPP A + P ++SRRF ++VSP+VP+
Sbjct: 786 DDFSRSSNAYVGKLRSNFLGTKFTIYDSQPP-HGAGVQP--NSRSSRRFHPRQVSPRVPA 956
Query: 236 GSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSIS 295
+Y ++ V YELNVL TRGPR+M+CIM+SIP SA+ GG+ P P + +D F S+S
Sbjct: 957 CNYIVSTVAYELNVLRTRGPRRMNCIMNSIPVSAVQEGGNAP-TPTSFPQITDDHFCSVS 1133
Query: 296 F--SKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRV 353
K D + S++ +E+ + G LVLKNK PRWHEQLQCWCLNF+GRV
Sbjct: 1134AQEQKGKDPIGDLSNSTLTEL----SVQSQGPFESLVLKNKSPRWHEQLQCWCLNFKGRV 1301
Query: 354 TVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAF 413
TVASVKNFQL+A+ +P P P E +K+ILQF K K + Y PLS
Sbjct: 1302TVASVKNFQLVAAVEPSHNVP------PAEQEKVILQFWKDWKRY--IYYGLPLSTLCLP 1457
Query: 414 AIC 416
++C
Sbjct: 1458SLC 1466
Score = 76.3 bits (186), Expect = 2e-14
Identities = 34/42 (80%), Positives = 38/42 (89%)
Frame = +1
Query: 386 KIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
++ FGK+GKD+FTMDYRYPLSAFQAFAICLSSFDTK ACE
Sbjct: 1381 RLSCSFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 1506
>TC77823 similar to GP|11067277|gb|AAG28805.1 unknown protein {Arabidopsis
thaliana}, partial (27%)
Length = 818
Score = 359 bits (921), Expect = 1e-99
Identities = 172/173 (99%), Positives = 172/173 (99%)
Frame = +2
Query: 255 PRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSISFSKSLDHSIEFSSARFSEI 314
PRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSF SISFSKSLDHSIEFSSARFSEI
Sbjct: 23 PRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFPSISFSKSLDHSIEFSSARFSEI 202
Query: 315 GGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPAGAP 374
GGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPAGAP
Sbjct: 203 GGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPAGAP 382
Query: 375 TPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
TPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 383 TPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 541
>TC78676 similar to GP|18252343|gb|AAL66203.1 putative Tub family protein
{Pyrus communis}, partial (90%)
Length = 1227
Score = 290 bits (742), Expect = 7e-79
Identities = 163/316 (51%), Positives = 201/316 (63%), Gaps = 2/316 (0%)
Frame = +2
Query: 114 SLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVIS 173
S+KQPGPR+ ++QCFIKR++S TY+LFL L+ +L
Sbjct: 2 SVKQPGPRENLLQCFIKRNRSTQTYYLFLSLTSSL------------------------- 106
Query: 174 MDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFS--KKVSP 231
D+ GKLRSNFLGTKF IYD QPP A T S R K+VSP
Sbjct: 107 --GDD---------GKLRSNFLGTKFTIYDGQPPHAGAKF----TKSRSTRLVNLKQVSP 241
Query: 232 KVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSF 291
KVP+G+Y +A ++YELNVLG+RGPR+MHC+M SIP+S+++ GG P Q E ++E F
Sbjct: 242 KVPTGNYPVAHISYELNVLGSRGPRRMHCVMDSIPSSSIEPGGVAPTQTEFSLNNIE-MF 418
Query: 292 RSISFSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRG 351
F +S + + +S +G D K LVLKNK PRWHEQLQCWCLNF G
Sbjct: 419 PLFPFFRSKSNRVVENSLSGPLVG-------DKKDGMLVLKNKAPRWHEQLQCWCLNFHG 577
Query: 352 RVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQ 411
RVT+ASVKNFQL+AS + + A PEHDKIILQFGKVGKD+FTMD+RYP+SAFQ
Sbjct: 578 RVTIASVKNFQLVASAE--------NGTAGPEHDKIILQFGKVGKDLFTMDFRYPISAFQ 733
Query: 412 AFAICLSSFDTKLACE 427
AFAICLSSFDTK+ACE
Sbjct: 734 AFAICLSSFDTKIACE 781
>TC78677 similar to GP|18377640|gb|AAL66970.1 putative tubby protein
{Arabidopsis thaliana}, partial (53%)
Length = 1027
Score = 154 bits (390), Expect(2) = 2e-70
Identities = 68/124 (54%), Positives = 100/124 (79%)
Frame = +2
Query: 49 IQNSCWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGK 108
++ SCWAN+P ELL +V+ R+E SE+TWP RK+VVACA VC+SWR + K+IV+ PE
Sbjct: 338 LRQSCWANMPQELLREVLLRIEASEDTWPPRKNVVACAGVCRSWRVITKEIVKKPEISAM 517
Query: 109 LTFPVSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYT 168
+TFP+S+KQPGPR+ ++QCFIKR++S TY+LFL L+ + L ++GKFLL+A++ +R T T
Sbjct: 518 ITFPISVKQPGPRENLLQCFIKRNRSTQTYYLFLSLTSS-LGDDGKFLLAARKCKRPTCT 694
Query: 169 EYVI 172
+Y++
Sbjct: 695 DYIM 706
Score = 129 bits (324), Expect(2) = 2e-70
Identities = 64/109 (58%), Positives = 81/109 (73%), Gaps = 2/109 (1%)
Frame = +3
Query: 173 SMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFS--KKVS 230
S+DAD++SR SN Y+GKLRSNFLGTKF IYD QPP A T S R K+VS
Sbjct: 708 SLDADDMSRGSNNYVGKLRSNFLGTKFTIYDGQPPHAGAKF----TKSRSTRLVNLKQVS 875
Query: 231 PKVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQ 279
PKVP+G+Y +A ++YELNVLG+RGPR+MHC+M SIP+S+++ GG P Q
Sbjct: 876 PKVPTGNYPVAHISYELNVLGSRGPRRMHCVMDSIPSSSIEPGGVAPTQ 1022
>TC82140 similar to PIR|E96513|E96513 unknown protein 3155-1759 [imported]
- Arabidopsis thaliana, partial (42%)
Length = 1120
Score = 213 bits (542), Expect = 1e-55
Identities = 114/230 (49%), Positives = 155/230 (66%), Gaps = 19/230 (8%)
Frame = +3
Query: 1 MSFRSIVRDVRD---SFGSLSRRSFDVKLTGHHHR-GKSHGSVQDLHDQPLVI------- 49
M F+SIV+++++ G++ RR + K H HR GKSH + + L +
Sbjct: 375 MPFKSIVKELKEMKEGIGNMYRRGVETK---HMHRHGKSHIAPECSSPISLSVPTTPSSL 545
Query: 50 --------QNSCWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVR 101
S WANLPPELL D+I+R+E SE +WPSR+ +VACASVC+ WR++ K +V+
Sbjct: 546 SSSSSSSSSQSQWANLPPELLLDIIQRVEASETSWPSRRALVACASVCRLWRDITKGVVK 725
Query: 102 SPEFCGKLTFPVSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKR 161
+ E CG +TFP+SLKQPGPRD IQCFIKR+++ Y L+L LSPAL + K LL+AK+
Sbjct: 726 TLEQCGWITFPISLKQPGPRDNPIQCFIKRERATSNYSLYLGLSPALSGDMSKLLLAAKK 905
Query: 162 TRRTTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSA 211
RR T TE++IS+ +D+ SR++NTYIGKLRSNFLGTKF I D PP S+
Sbjct: 906 IRRATCTEFLISLVSDDFSRANNTYIGKLRSNFLGTKFTILDGHPPHVSS 1055
>TC86942 homologue to GP|7635492|emb|CAB88665.1 tubby-like protein {Cicer
arietinum}, partial (48%)
Length = 863
Score = 212 bits (539), Expect = 3e-55
Identities = 110/208 (52%), Positives = 151/208 (71%), Gaps = 3/208 (1%)
Frame = +1
Query: 1 MSFRSIVRDVR---DSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANL 57
MSF+SIVR+++ + GS+S+R D K R KSH + +P IQ WA+L
Sbjct: 238 MSFKSIVRELKGMKNGIGSISKRGSDTK--NWLCRSKSHVAPDVTPIEP--IQQGQWASL 405
Query: 58 PPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQ 117
PPELL D+IRR+EESE +WP+R VV CASVC+SWR++ K+I+++P+ CG++TFP+SLKQ
Sbjct: 406 PPELLLDIIRRVEESETSWPARAVVVFCASVCKSWRSVTKEIIKTPQQCGRITFPISLKQ 585
Query: 118 PGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDAD 177
PGPRD IQCFI+R++ T+ L+L L P+ E+ K LL+A++ RR T T++VIS+ D
Sbjct: 586 PGPRDYPIQCFIRRNRETSTFVLYLGLVPS-EHESNKLLLAARKIRRATGTDFVISLGTD 762
Query: 178 NISRSSNTYIGKLRSNFLGTKFIIYDTQ 205
+ SR+SN Y+GKLRSNF GTKF IYD Q
Sbjct: 763 DFSRASNKYVGKLRSNFWGTKFAIYDNQ 846
>TC90967 similar to GP|16323400|gb|AAL15194.1 unknown protein {Arabidopsis
thaliana}, partial (43%)
Length = 846
Score = 122 bits (306), Expect(2) = 3e-53
Identities = 60/109 (55%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
Frame = +1
Query: 153 GKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAH 212
GKFLL+AKR R T+TEY IS+DAD++S+ SN Y+GKL S+FLGT F IYD+QPP A
Sbjct: 454 GKFLLAAKRYRCGTHTEYAISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGA- 630
Query: 213 ICPPGTGKTSRRF-SKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHC 260
P + SRRF SK++SP+VP+G++ V+Y+ N+L +RGPR+M C
Sbjct: 631 --KPSCARASRRFASKQISPQVPAGNFEAGDVSYKFNLLKSRGPRRMMC 771
Score = 104 bits (260), Expect(2) = 3e-53
Identities = 47/106 (44%), Positives = 74/106 (69%)
Frame = +3
Query: 54 WANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPV 113
W+ + P+LL ++I+R++ +E WP R++VVACA VC+ WR++ ++IV+SP+ G +TFP
Sbjct: 159 WSTMLPDLLAEIIKRVDVAEEQWPHRQNVVACACVCKRWRDITREIVKSPQRNGTITFPS 338
Query: 114 SLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSA 159
LKQPGPRD C IKR K T++L+L L+ + + GK +S+
Sbjct: 339 CLKQPGPRDLPHHCLIKRSKKTSTFYLYLALTSS-FSDKGKISISS 473
>AL383114 homologue to GP|7635492|emb| tubby-like protein {Cicer arietinum},
partial (19%)
Length = 473
Score = 128 bits (321), Expect = 5e-30
Identities = 61/86 (70%), Positives = 69/86 (79%)
Frame = +3
Query: 342 LQCWCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTM 401
LQCWCLNF GRVTVASVKNFQL+AS P +P E +++ILQFGK+GKD+FTM
Sbjct: 3 LQCWCLNFMGRVTVASVKNFQLVASVDPSHNV------SPAEQERVILQFGKIGKDIFTM 164
Query: 402 DYRYPLSAFQAFAICLSSFDTKLACE 427
DY YPLSAFQAFAICL+SFDTK ACE
Sbjct: 165 DYSYPLSAFQAFAICLTSFDTKPACE 242
>BG583821 homologue to GP|16323400|gb| unknown protein {Arabidopsis
thaliana}, partial (20%)
Length = 388
Score = 97.1 bits (240), Expect(2) = 1e-21
Identities = 52/82 (63%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +1
Query: 347 LNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPP-EHDKIILQFGKVGKDMFTMDYRY 405
L GRVTVASVKNFQL+A+ SQP + + ++LQFGKVG D FTMDYR
Sbjct: 13 LELHGRVTVASVKNFQLVATVDQ-------SQPGGKGDEETVLLQFGKVGDDTFTMDYRQ 171
Query: 406 PLSAFQAFAICLSSFDTKLACE 427
PLSAFQAFAICL+SF TKLACE
Sbjct: 172 PLSAFQAFAICLTSFGTKLACE 237
Score = 23.9 bits (50), Expect(2) = 1e-21
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 343 QCWCLNF 349
QCWCLNF
Sbjct: 2 QCWCLNF 22
>AW691999 similar to GP|22654973|gb| At1g76900/F7O12_7 {Arabidopsis
thaliana}, partial (8%)
Length = 542
Score = 56.6 bits (135), Expect(3) = 1e-16
Identities = 29/35 (82%), Positives = 31/35 (87%)
Frame = +3
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKS 35
MSFRSIVRDVRD FGSLSRRSF+V+L G H RGKS
Sbjct: 312 MSFRSIVRDVRDGFGSLSRRSFEVRLPG-HQRGKS 413
Score = 40.0 bits (92), Expect(3) = 1e-16
Identities = 19/29 (65%), Positives = 23/29 (78%), Gaps = 1/29 (3%)
Frame = +1
Query: 32 RGKSH-GSVQDLHDQPLVIQNSCWANLPP 59
+G+S SV +LHDQP VIQNS WA+LPP
Sbjct: 400 KGESRVASVHELHDQPPVIQNSPWASLPP 486
Score = 26.9 bits (58), Expect(3) = 1e-16
Identities = 12/17 (70%), Positives = 15/17 (87%)
Frame = +2
Query: 59 PELLFDVIRRLEESENT 75
PELL DVI+RLE +E+T
Sbjct: 485 PELLRDVIKRLEATEST 535
>BE998322 similar to GP|7635492|emb| tubby-like protein {Cicer arietinum},
partial (17%)
Length = 294
Score = 56.6 bits (135), Expect = 2e-08
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = +2
Query: 1 MSFRSIVRDVR---DSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANL 57
MSF+SIVR+++ + GS+S+R D K R KSH + +P IQ WA+L
Sbjct: 74 MSFKSIVRELKGMKNGIGSISKRGSDTK--NWLCRSKSHVAPDVTPIEP--IQQGQWASL 241
Query: 58 PPELLFDVIRRLEESE 73
PPELL D+IR++EESE
Sbjct: 242 PPELLLDIIRKVEESE 289
>BG647908 similar to GP|22654973|gb| At1g76900/F7O12_7 {Arabidopsis
thaliana}, partial (14%)
Length = 507
Score = 56.2 bits (134), Expect = 2e-08
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +1
Query: 126 QCFIKRDKSNLTYHLFLCLSPALLVENGKF 155
QCFIKRDKS LTYHLFLCLSPALLVE F
Sbjct: 373 QCFIKRDKSKLTYHLFLCLSPALLVEMESF 462
Score = 37.0 bits (84), Expect = 0.015
Identities = 25/52 (48%), Positives = 27/52 (51%)
Frame = +3
Query: 118 PGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTE 169
PG RDG I F ++ L NGKFLLSAKRTRRTT TE
Sbjct: 348 PGYRDGPIPVFHQKR*I*ADIPPLPLPQSCLAC*NGKFLLSAKRTRRTTCTE 503
Score = 25.0 bits (53), Expect(2) = 0.65
Identities = 10/11 (90%), Positives = 11/11 (99%)
Frame = +3
Query: 107 GKLTFPVSLKQ 117
GK+TFPVSLKQ
Sbjct: 36 GKITFPVSLKQ 68
Score = 25.0 bits (53), Expect(2) = 0.65
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 96 CKDIVRSPEFCGK 108
CK+IV S E+CGK
Sbjct: 2 CKEIVNSLEYCGK 40
>TC91391 weakly similar to GP|21427473|gb|AAM53249.1 actin-related protein
8A {Arabidopsis thaliana}, partial (17%)
Length = 666
Score = 32.7 bits (73), Expect = 0.27
Identities = 26/93 (27%), Positives = 40/93 (42%)
Frame = +2
Query: 6 IVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPELLFDV 65
++R + DS S +RS + T +SH PL + +S LPP++L +
Sbjct: 77 LLRKLCDSASSSIKRSTNT--TNSSSSSRSHQHHHHHAPSPLGLFDS----LPPDILLKI 238
Query: 66 IRRLEESENTWPSRKHVVACASVCQSWRNMCKD 98
R L KH VC+SWR++ D
Sbjct: 239 TRLL--------GPKHAAKLCLVCKSWRSLVSD 313
>TC80014 weakly similar to GP|21536784|gb|AAM61116.1 unknown {Arabidopsis
thaliana}, partial (25%)
Length = 1587
Score = 32.0 bits (71), Expect = 0.47
Identities = 23/68 (33%), Positives = 34/68 (49%)
Frame = +2
Query: 34 KSHGSVQDLHDQPLVIQNSCWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWR 93
KS ++ + L +Q WA+LP ELL +I RL +N V ++VC+SW
Sbjct: 113 KSRREATEVKNDNLELQT--WADLPAELLEMIISRLALEDN--------VRASAVCKSW- 259
Query: 94 NMCKDIVR 101
N + VR
Sbjct: 260 NFVANAVR 283
>BQ141543 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (15%)
Length = 1271
Score = 30.4 bits (67), Expect = 1.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 351 GRVTVASVKNFQLIASTQPPAGAPTPSQPA-PPEH 384
G V S +F+L + T PP+G+P+P P+ PP H
Sbjct: 745 GSYWVFSPVSFRLAS*TIPPSGSPSPPPPSHPPRH 641
>TC83652 similar to GP|3273101|emb|CAA76808.1 N7 protein {Medicago
truncatula}, partial (10%)
Length = 584
Score = 29.6 bits (65), Expect = 2.3
Identities = 13/45 (28%), Positives = 23/45 (50%)
Frame = +2
Query: 54 WANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKD 98
W LP ++ ++++RL+ + V + VC W N+CKD
Sbjct: 182 WLALPRDITVNILQRLDTIDV-------VTSACQVCPLWWNICKD 295
>TC89058 similar to GP|19071218|gb|AAL84162.1 putative heavy metal transporter
{Arabidopsis thaliana}, partial (10%)
Length = 1618
Score = 29.6 bits (65), Expect = 2.3
Identities = 17/74 (22%), Positives = 34/74 (44%)
Frame = +1
Query: 34 KSHGSVQDLHDQPLVIQNSCWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWR 93
K HG++ D+ Q + + E+ D+I +E+ + H C+++ + +
Sbjct: 940 KDHGTIHDIQHQKSGCHSDFKKHETDEISIDII-----TEHVELASMH--GCSNLAEKEK 1098
Query: 94 NMCKDIVRSPEFCG 107
+ CKD + P CG
Sbjct: 1099 DSCKDCPKLPVVCG 1140
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,424,965
Number of Sequences: 36976
Number of extensions: 257060
Number of successful extensions: 2440
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2410
length of query: 427
length of database: 9,014,727
effective HSP length: 99
effective length of query: 328
effective length of database: 5,354,103
effective search space: 1756145784
effective search space used: 1756145784
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC136472.10