TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136286.2 - phase: 0 
         (251 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC88781 similar to GP|9369366|gb|AAF87115.1| F10A5.18 {Arabidops...   134  4e-32
TC93790 weakly similar to GP|9369366|gb|AAF87115.1| F10A5.18 {Ar...    70  1e-12
AL382796 weakly similar to GP|20161084|dbj putative glyoxal oxid...    60  6e-10
TC85101 similar to GP|15809876|gb|AAL06866.1 AT3g53950/F5K20_250...    58  4e-09
AL374519 similar to GP|15809876|gb| AT3g53950/F5K20_250 {Arabido...    50  7e-09
BF519820 weakly similar to GP|15809876|gb AT3g53950/F5K20_250 {A...    30  1.1
AI974769                                                               29  2.0
TC88750 similar to GP|16604523|gb|AAL24267.1 At2g31810/F20M17.15...    28  3.3
TC91419 similar to GP|21594030|gb|AAM65948.1 unknown {Arabidopsi...    27  5.7
TC85557 homologue to GP|1389640|dbj|BAA12982.1 PNDKN1 {Pisum sat...    27  7.5
TC82964 similar to GP|22655058|gb|AAM98120.1 predicted protein {...    27  7.5
TC85556 homologue to GP|1389640|dbj|BAA12982.1 PNDKN1 {Pisum sat...    27  7.5
TC83211 similar to GP|5803275|dbj|BAA83585.1 EST AU056133(S20320...    27  9.7

>TC88781 similar to GP|9369366|gb|AAF87115.1| F10A5.18 {Arabidopsis thaliana},
            partial (67%)
          Length = 1391

 Score =  134 bits (336), Expect = 4e-32
 Identities = 66/113 (58%), Positives = 82/113 (72%)
 Frame = +1

Query: 1    MEVMPVPRVMPDMLLLPTGNVIILNGAANGTAGWENAANPVLYPVLYKPGLDNPFMKFEL 60
            ME MP  RVM DM+LLP G+V+++NGAA G+AGWE+  NPVL P LYKP       +F+L
Sbjct: 1033 METMPGGRVMSDMILLPNGDVLLINGAAVGSAGWESGRNPVLNPFLYKPN-SLVGSRFQL 1209

Query: 61   LAPASTPRMYHSSAVLLPDGRILVGGSNPHRLYDFQAKYPTELSLDAYYPDYL 113
              P+  PRMYHS+AVLL DGR+LV GSNPH  Y+F   +PTEL L+A+ P YL
Sbjct: 1210 QKPSDIPRMYHSTAVLLRDGRVLVAGSNPHVNYNFTRLFPTELRLEAFSPSYL 1368


>TC93790 weakly similar to GP|9369366|gb|AAF87115.1| F10A5.18 {Arabidopsis
           thaliana}, partial (11%)
          Length = 574

 Score = 69.7 bits (169), Expect = 1e-12
 Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
 Frame = +1

Query: 153 NRIRVSMVAPSFTTHSFAMNQRLLFL-EVTALEEVVNSMQDQNFGEFGFGSSLGPGKIAN 211
           N + V+M APSF THSF+MNQRLL L E+++ + VV                      + 
Sbjct: 13  NMVSVTMYAPSFNTHSFSMNQRLLVLDELSSSKNVVGE--------------------ST 132

Query: 212 SVYKATVRGPPSLNVAPPGYYMLFVIHVGIPSVATWVHV 250
           S Y+  V  P S  +APPGYY+LFV+H  +PS   WV +
Sbjct: 133 STYQVEVAIPNSPILAPPGYYLLFVVHQEVPSQGVWVQL 249


>AL382796 weakly similar to GP|20161084|dbj putative glyoxal oxidase {Oryza
           sativa (japonica cultivar-group)}, partial (4%)
          Length = 465

 Score = 60.5 bits (145), Expect = 6e-10
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = +3

Query: 27  AANGTAGWENAANPVLYPVLYKPGLDNPFMKFELLAPASTPRMYHSSAVLLPDGRILVGG 86
           A N T     A  P   P+LY P  +    ++         R+YHSSA L+PDG + V G
Sbjct: 30  ATNKTPRLHTAGKPTRNPLLYNPH-EKKGSRWSKFTEDPIIRVYHSSATLIPDGTVFVAG 206

Query: 87  SNPHRLY--DFQAKYPTELSLDAYYPDYL 113
           SNP+R Y    Q ++PTE   + +YP YL
Sbjct: 207 SNPNRYYCGMDQCEHPTEHRAEKFYPPYL 293


>TC85101 similar to GP|15809876|gb|AAL06866.1 AT3g53950/F5K20_250
           {Arabidopsis thaliana}, partial (12%)
          Length = 519

 Score = 57.8 bits (138), Expect = 4e-09
 Identities = 33/94 (35%), Positives = 48/94 (50%)
 Frame = +2

Query: 157 VSMVAPSFTTHSFAMNQRLLFLEVTALEEVVNSMQDQNFGEFGFGSSLGPGKIANSVYKA 216
           V++ +  F THSF+  QRL+ L                    G  S++  G   +  ++ 
Sbjct: 5   VNLGSAPFATHSFSQGQRLIKL--------------------GVASAMVDG---DQRWRI 115

Query: 217 TVRGPPSLNVAPPGYYMLFVIHVGIPSVATWVHV 250
               PPS  VAPPGYYMLF ++ G+PSVA W+H+
Sbjct: 116 RCTAPPSGMVAPPGYYMLFAVNQGVPSVARWIHM 217


>AL374519 similar to GP|15809876|gb| AT3g53950/F5K20_250 {Arabidopsis
          thaliana}, partial (17%)
          Length = 532

 Score = 49.7 bits (117), Expect(2) = 7e-09
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = +1

Query: 60 LLAPASTPRMYHSSAVLLPDGRILVGGSNPH 90
          +L P + PR+YHS+A LLPDGR+L+ GSNPH
Sbjct: 4  VLNPGTVPRLYHSTANLLPDGRVLLAGSNPH 96



 Score = 26.9 bits (58), Expect(2) = 7e-09
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 120 LRPVIVAV-EVVNSTLSYESLFSVSFLLREVKDVNRIRVSMVAPSFTTHSFAMNQRLLFL 178
           +RP I+ V E V   + ++ + SV   +     V  I V++ +  F THSF+  QRL+ L
Sbjct: 204 IRPKILEVPETVLYGVGFDVVVSVPLPV-----VGIIEVNLGSAPFATHSFSQGQRLIKL 368


>BF519820 weakly similar to GP|15809876|gb AT3g53950/F5K20_250 {Arabidopsis
           thaliana}, partial (34%)
          Length = 574

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = +1

Query: 15  LLPTGNVIILNGAANGTAGWENAANPVLYPVLYKPGLDNPFMKFELLAPASTPRM--YHS 72
           +LP G++II+ G  + T             V + P  +N  + F  L      +M   + 
Sbjct: 172 ILPDGSIIIIGGRGSNT-------------VEFYPKRENGVVLFPFLQETEDTQMDNLYP 312

Query: 73  SAVLLPDGRILVGGSNPHRLYDF 95
              LLP+G++ V  +    +YDF
Sbjct: 313 YVHLLPNGKLFVFANTKSVMYDF 381


>AI974769 
          Length = 361

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 13/67 (19%)
 Frame = +1

Query: 39  NPVLYPVLYKPGLDNPFMKFELLAPASTPRMYHSSAVLLP-------------DGRILVG 85
           +P+L P ++K  L+  F K E+L   + P++ +SS++ +              +GRI++G
Sbjct: 115 SPILDPTIFKNFLNFKFPKIEILCNFN-PQLRNSSSLTIFYFLIFYF*FFEKFEGRIVIG 291

Query: 86  GSNPHRL 92
           G N + L
Sbjct: 292 GGNLNNL 312


>TC88750 similar to GP|16604523|gb|AAL24267.1 At2g31810/F20M17.15
           {Arabidopsis thaliana}, partial (36%)
          Length = 803

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
 Frame = +3

Query: 120 LRPVIVAVEVVNSTLSYESLFSVSFLLREVKDV-------NRIRVSMVAPSFTTHSFAMN 172
           LR V+  ++ + + L  E L     + RE+  V       NR  +  +  +F      ++
Sbjct: 408 LRQVVEQLQKLVNVLKVEDLSREPQVERELMLVKVHADPQNRAEIKWLVDTFRAKIVDIS 587

Query: 173 QRLLFLEVTALEEVVNSMQDQNFGEFGFGSSLGPGKIA 210
           +  + +EVT     + ++Q +NFG+FG       GKIA
Sbjct: 588 EHSVTIEVTGDPGKMVAVQ-RNFGKFGIKEIARTGKIA 698


>TC91419 similar to GP|21594030|gb|AAM65948.1 unknown {Arabidopsis
           thaliana}, partial (27%)
          Length = 817

 Score = 27.3 bits (59), Expect = 5.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 221 PPSLNVAPPGYYMLFVIHVGIP 242
           PP   +AP  YY+ FV  +GIP
Sbjct: 475 PPEWGLAPSSYYVPFVPIIGIP 540


>TC85557 homologue to GP|1389640|dbj|BAA12982.1 PNDKN1 {Pisum sativum},
           partial (75%)
          Length = 1129

 Score = 26.9 bits (58), Expect = 7.5
 Identities = 11/32 (34%), Positives = 18/32 (55%)
 Frame = +2

Query: 30  GTAGWENAANPVLYPVLYKPGLDNPFMKFELL 61
           G A W+++ +  +Y   YKP +D  F  F+ L
Sbjct: 806 GPAAWQSSLHSWIYE*RYKPEVDGEFSHFDPL 901


>TC82964 similar to GP|22655058|gb|AAM98120.1 predicted protein {Arabidopsis
           thaliana}, partial (73%)
          Length = 1244

 Score = 26.9 bits (58), Expect = 7.5
 Identities = 16/42 (38%), Positives = 21/42 (49%)
 Frame = -1

Query: 199 GFGSSLGPGKIANSVYKATVRGPPSLNVAPPGYYMLFVIHVG 240
           GF    G GKI N V   TV+ PP++ +  P Y    +I  G
Sbjct: 350 GFPFEEGTGKI-NPVLYDTVQSPPTIELTTPDYVAEALIQRG 228


>TC85556 homologue to GP|1389640|dbj|BAA12982.1 PNDKN1 {Pisum sativum},
           complete
          Length = 785

 Score = 26.9 bits (58), Expect = 7.5
 Identities = 11/32 (34%), Positives = 18/32 (55%)
 Frame = +2

Query: 30  GTAGWENAANPVLYPVLYKPGLDNPFMKFELL 61
           G A W+++ +  +Y   YKP +D  F  F+ L
Sbjct: 464 GPAAWQSSLHSWIYE*RYKPEVDGEFSHFDPL 559


>TC83211 similar to GP|5803275|dbj|BAA83585.1 EST AU056133(S20320)
           corresponds to a region of the predicted gene.~Similar
           to Caenorhabditis, partial (22%)
          Length = 690

 Score = 26.6 bits (57), Expect = 9.7
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -1

Query: 108 YYPDYLRPELDTLRPVIVAVEVVNSTLSYESLFSVSFLLRE 148
           Y  D +R  +  L P +  +  VNS  SYE   + SF L E
Sbjct: 204 YLHD*VRKCITPLTPTVTQLSNVNSRRSYEYEITTSFQLHE 82


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.138    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,139,564
Number of Sequences: 36976
Number of extensions: 94237
Number of successful extensions: 473
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of query: 251
length of database: 9,014,727
effective HSP length: 94
effective length of query: 157
effective length of database: 5,538,983
effective search space: 869620331
effective search space used: 869620331
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)