TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136142.5 - phase: 0 
         (166 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78121 similar to GP|21555571|gb|AAM63888.1 unknown {Arabidopsi...   254  1e-68
CA860080 similar to GP|13528960|gb| NADH dehydrogenase (ubiquino...    69  1e-12
TC77007 similar to PIR|T10804|T10804 tonoplast intrinsic protein...    30  0.58
TC87078 similar to PIR|T50645|T50645 glucan endo-1 3-beta-D-gluc...    28  2.2
AW685256 weakly similar to SP|Q9LDU6|ST7R_ 7-dehydrocholesterol ...    27  2.9
TC77226                                                                27  2.9
BF649595 similar to GP|21929046|dbj seven transmembrane helix re...    24  4.4
TC86432 similar to PIR|T05120|T05120 hypothetical protein F7H19....    27  4.9
TC93861 similar to GP|15451102|gb|AAK96822.1 Unknown protein {Ar...    26  6.4
BE318346                                                               26  8.4

>TC78121 similar to GP|21555571|gb|AAM63888.1 unknown {Arabidopsis
           thaliana}, partial (75%)
          Length = 871

 Score =  254 bits (648), Expect = 1e-68
 Identities = 123/125 (98%), Positives = 124/125 (98%)
 Frame = +2

Query: 1   MTNILLRTASRGGSLRATLIRRFSTDALVESKPGEIGLVSGIPQEHLRRRVLIYSPARTA 60
           MTNILLRTASRGGSLRATLIRRFSTDALVESKPGEIGLVSGIPQEHLRRRVLIYSPARTA
Sbjct: 98  MTNILLRTASRGGSLRATLIRRFSTDALVESKPGEIGLVSGIPQEHLRRRVLIYSPARTA 277

Query: 61  GQQGSGNVGRWRINFLSTQKWENPLMGWTSTGDPYSHVGDSALDFDTEEAAKEFAERHGW 120
           GQQGSGNVGRWRINFLSTQKWENPLMGWTSTGDPYSHVGDSALDFDTEEAAKEFAERHGW
Sbjct: 278 GQQGSGNVGRWRINFLSTQKWENPLMGWTSTGDPYSHVGDSALDFDTEEAAKEFAERHGW 457

Query: 121 EYVAE 125
           EYV +
Sbjct: 458 EYVVK 472


>CA860080 similar to GP|13528960|gb| NADH dehydrogenase (ubiquinone) Fe-S
           protein 4 (18kD) (NADH-coenzyme Q reductase) {Homo
           sapiens}, partial (17%)
          Length = 351

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 34/83 (40%), Positives = 52/83 (61%), Gaps = 3/83 (3%)
 Frame = +3

Query: 49  RRVLIYSPARTAGQQGSGNVGRWRINFLSTQK---WENPLMGWTSTGDPYSHVGDSALDF 105
           R V IY P++TA Q G+ N   WRI+F   +K   WENPLMGW+S+ D   ++    + F
Sbjct: 9   RTVRIYKPSKTAMQSGTHNTKHWRIDFDIMEKGDRWENPLMGWSSSAD---YMQALQMKF 179

Query: 106 DTEEAAKEFAERHGWEYVAEGLN 128
           +T+E A +FA++ GW++  +  N
Sbjct: 180 NTKEDAIQFADKQGWDHYVQEHN 248


>TC77007 similar to PIR|T10804|T10804 tonoplast intrinsic protein  delta
           type - upland cotton, complete
          Length = 1041

 Score = 29.6 bits (65), Expect = 0.58
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
 Frame = +2

Query: 1   MTNILLRTASRGGSLRATLIRRFSTDAL---VESKPGEIGLVSGIPQEHLRRRVLIYSPA 57
           +T I    A   GS+ A  + +F T  L   + S   E+G + G+  E +    L+Y+  
Sbjct: 371 LTGIFYWIAQLLGSIVACFLLQFVTGGLETPIHSVAAEVGPIGGVVTEIIITFGLVYTVY 550

Query: 58  RTAGQQGSGNVG 69
            TA     G++G
Sbjct: 551 ATAADPKKGSIG 586


>TC87078 similar to PIR|T50645|T50645 glucan endo-1 3-beta-D-glucosidase (EC
            3.2.1.39) [imported] - garden pea, partial (94%)
          Length = 1628

 Score = 27.7 bits (60), Expect = 2.2
 Identities = 17/37 (45%), Positives = 23/37 (61%), Gaps = 4/37 (10%)
 Frame = +1

Query: 131  HRFHCDFSNLNDSGIIISSF-HHFFC---ACFAPLLI 163
            H F+CDFSN   SG+I+S+   H  C   ACF  ++I
Sbjct: 1288 HPFNCDFSN---SGVIVSTNPSHDNCRI*ACFLKVII 1389


>AW685256 weakly similar to SP|Q9LDU6|ST7R_ 7-dehydrocholesterol reductase
           (EC 1.3.1.21) (7-DHC reductase) (Sterol
           delta-7-reductase), partial (15%)
          Length = 652

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 10/32 (31%), Positives = 17/32 (52%)
 Frame = +1

Query: 123 VAEGLNIIHRFHCDFSNLNDSGIIISSFHHFF 154
           +  G+ + H  H  + NLN S + I + +H F
Sbjct: 25  ICSGIVLFHIMHKQYVNLNHSSLYIVNLNHIF 120


>TC77226 
          Length = 820

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 10/32 (31%), Positives = 17/32 (52%)
 Frame = +1

Query: 123 VAEGLNIIHRFHCDFSNLNDSGIIISSFHHFF 154
           +  G+ + H  H  + NLN S + I + +H F
Sbjct: 529 ICSGIVLFHIMHKQYVNLNHSSLYIVNLNHIF 624


>BF649595 similar to GP|21929046|dbj seven transmembrane helix receptor {Homo
           sapiens}, partial (6%)
          Length = 648

 Score = 24.3 bits (51), Expect(2) = 4.4
 Identities = 12/34 (35%), Positives = 16/34 (46%)
 Frame = -2

Query: 125 EGLNIIHRFHCDFSNLNDSGIIISSFHHFFCACF 158
           E  + I RFHC    L        +F+H +C CF
Sbjct: 491 ERTSSIGRFHCPCFQL-------LTFYHVYCFCF 411



 Score = 20.8 bits (42), Expect(2) = 4.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 152 HFFCACFAPLLII 164
           H+FC CF  L+++
Sbjct: 346 HWFCFCFWNLMLL 308


>TC86432 similar to PIR|T05120|T05120 hypothetical protein F7H19.70 -
           Arabidopsis thaliana, partial (72%)
          Length = 1235

 Score = 26.6 bits (57), Expect = 4.9
 Identities = 14/23 (60%), Positives = 16/23 (68%)
 Frame = +2

Query: 47  LRRRVLIYSPARTAGQQGSGNVG 69
           LRRR+ + SP  TA QQ  GNVG
Sbjct: 170 LRRRLFLLSPKATADQQ--GNVG 232


>TC93861 similar to GP|15451102|gb|AAK96822.1 Unknown protein {Arabidopsis
           thaliana}, partial (35%)
          Length = 913

 Score = 26.2 bits (56), Expect = 6.4
 Identities = 12/29 (41%), Positives = 14/29 (47%)
 Frame = -2

Query: 129 IIHRFHCDFSNLNDSGIIISSFHHFFCAC 157
           I +RF C FS  NDS +    F    C C
Sbjct: 762 ISNRFRCPFSGWNDSQMAKLVFRSLRCIC 676


>BE318346 
          Length = 382

 Score = 25.8 bits (55), Expect = 8.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 128 NIIHRFHCDFSNLNDSGIIISSFHHFFCA 156
           NIIH FHC    +    II +S  ++FC+
Sbjct: 159 NIIHSFHCLHGIIIICIIIFASSLNYFCS 245


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.323    0.139    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,204,605
Number of Sequences: 36976
Number of extensions: 90562
Number of successful extensions: 548
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of query: 166
length of database: 9,014,727
effective HSP length: 89
effective length of query: 77
effective length of database: 5,723,863
effective search space: 440737451
effective search space used: 440737451
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)