TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136141.8 - phase: 0 
         (339 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG644699 similar to PIR|T07863|T078 probable polyprotein - pinea...    62  3e-10
BF003873 similar to GP|14715222|em putative polyprotein {Cicer a...    50  1e-06
BG454871 weakly similar to GP|10140673|g putative gag-pol polypr...    39  0.003
BF636649 similar to GP|21628724|emb OSJNBa0033H08.7 {Oryza sativ...    36  0.019
TC79875 similar to PIR|D96767|D96767 unknown protein F2P9.16 [im...    33  0.12
TC83712 similar to PIR|T46236|T46236 hypothetical protein T9C5.1...    32  0.46
TC76939 homologue to GP|20042976|gb|AAM08784.1 Putative epimeras...    32  0.46
TC91321 similar to GP|14486602|gb|AAK63206.1 C2H2 zinc-finger pr...    31  0.60
TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-inf...    31  0.78
TC81742 similar to GP|20260600|gb|AAM13198.1 unknown protein {Ar...    29  2.3
TC79874 similar to GP|17065608|gb|AAL33784.1 unknown protein {Ar...    29  2.3
TC78476 homologue to SP|O22437|CHLD_PEA Magnesium-chelatase subu...    28  3.9
TC90577 homologue to GP|23499197|emb|CAD51277. hypothetical prot...    28  3.9
TC81586 similar to GP|9757976|dbj|BAB08312.1 contains similarity...    28  3.9
TC92631 weakly similar to PIR|E85185|E85185 HSP like protein [im...    28  5.1
TC93063 similar to PIR|T08852|T08852 lustrin A - California red ...    28  5.1
BQ752195 similar to PIR|S72468|S724 probable transcription facto...    28  6.6
AW697263 weakly similar to GP|9759418|dbj| dbj|BAA84609.1~gene_i...    28  6.6
AW690845 similar to PIR|D96715|D967 protein F4N2.10 [imported] -...    28  6.6
BF519604 similar to SP|Q02758|ATPD_ ATP synthase delta chain  ch...    27  8.6

>BG644699 similar to PIR|T07863|T078 probable polyprotein - pineapple
           retrotransposon dea1 (fragment), partial (5%)
          Length = 231

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = +2

Query: 91  KLAKRYYGPFLILRRIGPVAYELDLPPS-SRIHPVIHVSQLREYHGQDPDGHF 142
           KL+ RY GPF +++RIG VAYEL LPP  S +HPV HVS  + YHG   DG++
Sbjct: 65  KLSLRYIGPFEVIKRIGEVAYELALPPGLSGVHPVFHVSMFKRYHG---DGNY 214


>BF003873 similar to GP|14715222|em putative polyprotein {Cicer arietinum},
           partial (82%)
          Length = 559

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 30/70 (42%), Positives = 40/70 (56%), Gaps = 1/70 (1%)
 Frame = +2

Query: 89  SPKLAKRYYGPFLILRRIGPVAYELDLPPS-SRIHPVIHVSQLREYHGQDPDGHFRPIPP 147
           S KL  R+ GP+ I  R+G VAY + LPP    +H V HVSQLR+Y   DP    +    
Sbjct: 23  SKKLTVRFIGPYQISERVGTVAYRVGLPPHLLNLHDVFHVSQLRKY-VPDPSHVIQSDDV 199

Query: 148 EVANNLFNES 157
           +V +NL  E+
Sbjct: 200 QVRDNLTVET 229


>BG454871 weakly similar to GP|10140673|g putative gag-pol polyprotein {Oryza
           sativa (japonica cultivar-group)}, partial (7%)
          Length = 674

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
 Frame = +2

Query: 1   MTPFEALYGRPPPSIRNYVRGHTTVLKLDTTLAHIEHILHTIKENLERSKQRMGTLANQK 60
           MTPF+ALYGR    +            L + LA  E +L      L+    R+  L + K
Sbjct: 245 MTPFKALYGRDLSMLIRSKGSSKDTADLQSQLAQREELL----SQLQSISTRLNKL*SIK 412

Query: 61  RKDCTFVVGQLVWLRLQLYRQHTVHR-RTSPKLAKRYYGPFLILRRIGPVAYELDLPPSS 119
                 ++    W+   L   + ++  R      K    P L+       AY+L LP ++
Sbjct: 413 LIRNAAILSSS-WVSTSL*NCNLINSLR*HCGNIKSSVHPTLV-HY*QSAAYKLSLPSTA 586

Query: 120 RIHPVIHVSQLREYHG 135
           ++ P+ HVSQL+ +HG
Sbjct: 587 KVPPIFHVSQLKPFHG 634


>BF636649 similar to GP|21628724|emb OSJNBa0033H08.7 {Oryza sativa}, partial
           (4%)
          Length = 653

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +1

Query: 80  RQHTVHRRTSPKLAKRYYGPFLILRRIGPVAYELDLPPSSRIHPVIHVSQLREYHGQDPD 139
           R  T   +  PK     YGP+ ++++IG VA++L LP   +IH +  +    E HG    
Sbjct: 352 RDRTYEWQVLPKYVA*CYGPYQVIKQIGSVAFKL*LPEQHQIHLIACILS-XEGHGAPGG 528

Query: 140 G 140
           G
Sbjct: 529 G 531


>TC79875 similar to PIR|D96767|D96767 unknown protein F2P9.16 [imported] -
           Arabidopsis thaliana, partial (6%)
          Length = 747

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 17/57 (29%), Positives = 30/57 (51%), Gaps = 1/57 (1%)
 Frame = +2

Query: 245 VGNQTLTDAPASPKITPSFIQSPPSDPTTNHING-QHTTPCQLTESHRAPSHTEEHK 300
           + + ++  +P  P I   FIQS PS PT+ ++    + +PC+   S  +P H+   K
Sbjct: 104 IHHSSMVPSPKHPSINLFFIQSTPSSPTSQYLTQFSNLSPCR*PTS*TSPFHSHIFK 274


>TC83712 similar to PIR|T46236|T46236 hypothetical protein T9C5.180 -
           Arabidopsis thaliana, partial (13%)
          Length = 672

 Score = 31.6 bits (70), Expect = 0.46
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -3

Query: 258 KITPSFIQSPPSDPTTNHINGQHTTPCQLTESHRAPSHTEE 298
           K TP    S P    T H  GQH    + T+SH  PSH E+
Sbjct: 517 KGTPKHSSSHPHYGLTEHWEGQHHRHQKDTKSHHHPSHPEK 395


>TC76939 homologue to GP|20042976|gb|AAM08784.1 Putative
           epimerase/dehydratase {Oryza sativa}, partial (97%)
          Length = 1440

 Score = 31.6 bits (70), Expect = 0.46
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
 Frame = -3

Query: 16  RNYVRGHTTVLKLDTTLAHIEHILHTIKENL--------ERSKQRMGTLANQKRKDC 64
           RN + G+  VLK    L+H+ H  H +  N+         +SK    TL N+    C
Sbjct: 976 RNVLDGYAFVLKAKNNLSHLIHANHFVTSNIHWLPKV*FSQSKHAFNTLVNEGEGSC 806


>TC91321 similar to GP|14486602|gb|AAK63206.1 C2H2 zinc-finger protein
           SERRATE {Arabidopsis thaliana}, partial (23%)
          Length = 1069

 Score = 31.2 bits (69), Expect = 0.60
 Identities = 19/57 (33%), Positives = 28/57 (48%), Gaps = 1/57 (1%)
 Frame = +3

Query: 107 GP-VAYELDLPPSSRIHPVIHVSQLREYHGQDPDGHFRPIPPEVANNLFNESPENNH 162
           GP V++  D+PP   + PV          G  P G F P PPEVA  +F +   +++
Sbjct: 540 GPAVSFNSDMPPPPVLMPV---------PGAGPLGPFVPAPPEVAMQMFRDQGPSSY 683


>TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-infected
           erythrocyte surface antigen {Plasmodium falciparum},
           partial (2%)
          Length = 2007

 Score = 30.8 bits (68), Expect = 0.78
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
 Frame = +1

Query: 159 ENNHQDTAEGRQEPETGKEGQEKEKVIS-----------QMREKEPGIEKVNYSSTNVSS 207
           EN+ QD+ +G +E   G EG EKE+              Q  EK     + NYS  N SS
Sbjct: 445 ENHEQDSKQGTEETN-GTEGGEKEEHDKIKEDTSSDNQVQDGEKNNEAREENYSGDNASS 621

Query: 208 AV 209
           AV
Sbjct: 622 AV 627


>TC81742 similar to GP|20260600|gb|AAM13198.1 unknown protein {Arabidopsis
           thaliana}, partial (30%)
          Length = 1075

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 21/59 (35%), Positives = 26/59 (43%)
 Frame = +3

Query: 83  TVHRRTSPKLAKRYYGPFLILRRIGPVAYELDLPPSSRIHPVIHVSQLREYHGQDPDGH 141
           TV    SPK     Y  F +L +    +  LD  PSS          LR++ G DPDGH
Sbjct: 291 TVRLYGSPKSILTTYIRFALLHK----SVSLDFVPSSET--------LRDHFGSDPDGH 431


>TC79874 similar to GP|17065608|gb|AAL33784.1 unknown protein {Arabidopsis
           thaliana}, partial (88%)
          Length = 1154

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +1

Query: 238 PLNPITTVG-NQTLTDAPASPKITPSFIQSPPS--DPTTNHINGQHTTPCQLTESHRAPS 294
           P  PI++V    +L+     PK   S   +PPS   PT +H+N    +P  +T    APS
Sbjct: 193 PCAPISSVPVTPSLSSTAPPPKPNHSSTSAPPSLLPPTPSHLNLTSFSPSSVTPPTFAPS 372

Query: 295 HTEE 298
            + +
Sbjct: 373 SSTQ 384


>TC78476 homologue to SP|O22437|CHLD_PEA Magnesium-chelatase subunit chlD
           chloroplast precursor (Mg- protoporphyrin IX chelatase),
           partial (68%)
          Length = 1596

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 6/160 (3%)
 Frame = +2

Query: 38  ILHTIKENLERSKQRMGTLANQKRKDCTFVVGQLVWLRLQLYRQHTVHRRTS------PK 91
           +  T+ E+ + +K ++  LA +  KD T    QL +L L+  R      R         K
Sbjct: 200 VFKTVDEDTDNAKTQI-ILAREYLKDVTIGKEQLKYLVLEALRGGVQGHRAELYAARVAK 376

Query: 92  LAKRYYGPFLILRRIGPVAYELDLPPSSRIHPVIHVSQLREYHGQDPDGHFRPIPPEVAN 151
                 G   +       A EL + P S     I      E   Q P     P PP   N
Sbjct: 377 CLAALEGREKVYADDLKKAVELVILPRS-----IVTDNPPEQQNQPP-----PPPPPPQN 526

Query: 152 NLFNESPENNHQDTAEGRQEPETGKEGQEKEKVISQMREK 191
              NE  E N ++  E  +E E  K+ +EKE+   Q+ E+
Sbjct: 527 QESNE--EQNEEEDKEEEEEEEDDKD-EEKEEQQEQLPEE 637


>TC90577 homologue to GP|23499197|emb|CAD51277. hypothetical protein
           conserved {Plasmodium falciparum 3D7}, partial (1%)
          Length = 599

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 15/40 (37%), Positives = 22/40 (54%), Gaps = 2/40 (5%)
 Frame = +1

Query: 257 PKITPSFIQSPPSDPTTN--HINGQHTTPCQLTESHRAPS 294
           PK++   ++SP S  TT   H  G+ TT  + T +H  PS
Sbjct: 37  PKLSSLNLESPSSSTTTTLIHSGGRTTTKLRRTTAHPIPS 156


>TC81586 similar to GP|9757976|dbj|BAB08312.1 contains similarity to
           secretory protein~gene_id:K12B20.12 {Arabidopsis
           thaliana}, partial (56%)
          Length = 1180

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = -2

Query: 194 GIEKVNYSSTNVSSAVFKQGQMTLV--PLDASQPQDACSTTQDKYPPLNPITTVGNQTLT 251
           G+  +   ++ +S   F Q Q++++       QP D  + T    P     +T+GN T  
Sbjct: 675 GLRSIMGPTSRISCITFSQEQISIICSTTITFQPSDRFNNTILTLPKTKIPSTLGNTTYH 496

Query: 252 DAPASPK 258
             P +PK
Sbjct: 495 TRPTNPK 475


>TC92631 weakly similar to PIR|E85185|E85185 HSP like protein [imported] -
           Arabidopsis thaliana, partial (40%)
          Length = 811

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 14/46 (30%), Positives = 24/46 (51%)
 Frame = +1

Query: 147 PEVANNLFNESPENNHQDTAEGRQEPETGKEGQEKEKVISQMREKE 192
           P++     NE+ E+N Q+T     +  +  EGQ +EKV  Q   ++
Sbjct: 376 PKIQKPAKNET-ESNEQNTDNSNSDQSSNSEGQNEEKVDEQPETRD 510


>TC93063 similar to PIR|T08852|T08852 lustrin A - California red abalone,
           partial (4%)
          Length = 1058

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 27/116 (23%), Positives = 43/116 (36%), Gaps = 13/116 (11%)
 Frame = -1

Query: 158 PENNHQDTAEGRQEPETGKEGQEKEKVISQMREKEP-GIEKVNYSSTNVSSAVF------ 210
           PE   +   E   EPE   E + + +   +  E+EP  IE ++Y+S    S +       
Sbjct: 590 PEPEAEPEPEAEPEPEAEPEPEAEPEPEDEEEEQEPDDIETIDYTSNMPVSNMLTPAVET 411

Query: 211 -KQGQMTLVPLDASQPQ----DACSTTQDKYP-PLNPITTVGNQTLTDAPASPKIT 260
             Q      P D + PQ    D   +    YP P   +       +T +   P +T
Sbjct: 410 ANQDYFNSAPSDLTYPQPSAHDIAMSAVGSYPDPAATVDYSDQHAVTTSYGQPALT 243


>BQ752195 similar to PIR|S72468|S724 probable transcription factor grisea -
           Podospora anserina, partial (11%)
          Length = 735

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 14/49 (28%), Positives = 18/49 (36%)
 Frame = +2

Query: 137 DPDGHFRPIPPEVANNLFNESPENNHQDTAEGRQEPETGKEGQEKEKVI 185
           DP  H    PPE A    +  P    ++    R  PET  E      V+
Sbjct: 548 DPSAHVLTRPPEAAVAAVSPPPSRGSKNAVVDRVLPETPTESSSSSSVV 694


>AW697263 weakly similar to GP|9759418|dbj|
           dbj|BAA84609.1~gene_id:K7J8.2~similar to unknown protein
           {Arabidopsis thaliana}, partial (7%)
          Length = 829

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -1

Query: 249 TLTDAPASPKITPSFIQSPPSDPTTNHINGQHTTPCQLTESHRAPSH 295
           +L DA AS       + S  S     H    HT PCQL E   +PS+
Sbjct: 790 SLLDASASYTRRQQTVVSSSSVCRRIHYFSPHTLPCQLDEYSASPSY 650


>AW690845 similar to PIR|D96715|D967 protein F4N2.10 [imported] - Arabidopsis
           thaliana, partial (21%)
          Length = 581

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +2

Query: 223 SQPQDACSTTQDKYPPLNPITTVGNQTLTDAPASPKITPS--FIQSPPSDPTT 273
           S P D  + T    PP     +  +  +T  P +P   PS  +  SPP DP T
Sbjct: 92  SPPSDPITPTTPSNPPSGGYDSPPSDPIT--PTTPSNPPSGGYYNSPPQDPIT 244



 Score = 27.3 bits (59), Expect = 8.6
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +2

Query: 219 PLDASQPQDACSTTQDKYPPLNPITTVGNQTLTDAPASPKITPS--FIQSPPSDPTT 273
           PL  + P +  S   D  PP +PIT          P +P   PS  +  SPP DP T
Sbjct: 299 PLTPTTPSNPPSGGYDS-PPSDPIT----------PITPSNPPSGGYYNSPPQDPIT 436


>BF519604 similar to SP|Q02758|ATPD_ ATP synthase delta chain  chloroplast
           precursor (EC 3.6.3.14). [Garden pea] {Pisum sativum},
           partial (39%)
          Length = 379

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 26/91 (28%), Positives = 36/91 (38%), Gaps = 4/91 (4%)
 Frame = +3

Query: 225 PQDACSTTQDKYPPLNPITTVGNQTLTDAPA----SPKITPSFIQSPPSDPTTNHINGQH 280
           PQ+  ST+    PP  P  +   +    APA    +P+ TP   Q PP+ P    I    
Sbjct: 126 PQNPSSTSSYPAPPSPPQNSNSPKPNPAAPAAAHSAPQ*TP---QPPPATPAH*PI*PNP 296

Query: 281 TTPCQLTESHRAPSHTEEHKPNLEVKVSSGP 311
           TTP         P  T     N+ +K +  P
Sbjct: 297 TTP------STPPLQTSTKSKNVRIKTNLDP 371


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.313    0.131    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,809,713
Number of Sequences: 36976
Number of extensions: 162344
Number of successful extensions: 892
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of query: 339
length of database: 9,014,727
effective HSP length: 97
effective length of query: 242
effective length of database: 5,428,055
effective search space: 1313589310
effective search space used: 1313589310
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)