BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135799.6 + phase: 0
(321 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC92310 weakly similar to PIR|T47778|T47778 hypothetical protein... 166 1e-41
BQ124147 similar to GP|10177836|dbj emb|CAB62440.1~gene_id:MCD7.... 154 6e-38
BG450859 weakly similar to GP|21553400|gb| unknown {Arabidopsis ... 142 2e-34
TC89043 similar to GP|10178241|dbj|BAB11673. gene_id:MDJ22.9~unk... 111 4e-25
TC88413 weakly similar to GP|10176786|dbj|BAB09900. gene_id:MIK1... 99 3e-21
AL380606 94 5e-20
TC82492 similar to GP|14596145|gb|AAK68800.1 Unknown protein {Ar... 70 6e-19
BM815011 similar to PIR|T49178|T491 hypothetical protein T20N10.... 79 3e-15
BG646112 weakly similar to GP|10177368|dbj contains similarity t... 71 5e-13
TC91590 weakly similar to GP|10178235|dbj|BAB11667. gene_id:MDJ2... 69 3e-12
BI311381 weakly similar to PIR|T46128|T461 hypothetical protein ... 64 1e-10
TC87984 weakly similar to GP|10177368|dbj|BAB10659. contains sim... 62 3e-10
TC84389 weakly similar to GP|10177368|dbj|BAB10659. contains sim... 62 3e-10
CA990540 weakly similar to GP|10092259|gb| hypothetical protein;... 62 4e-10
TC82690 weakly similar to GP|9802755|gb|AAF99824.1| Unknown prot... 60 1e-09
TC92783 similar to PIR|T49020|T49020 hypothetical protein F3C22.... 57 7e-09
BG581615 similar to GP|10177368|dbj contains similarity to heat ... 57 7e-09
TC82256 similar to GP|20042913|gb|AAM08741.1 Unknown protein {Or... 57 7e-09
BF644690 weakly similar to GP|20042923|gb Putative copia-type po... 57 1e-08
AW690384 similar to GP|23496006|gb hypothetical protein {Plasmod... 53 2e-07
>TC92310 weakly similar to PIR|T47778|T47778 hypothetical protein F17J16.10
- Arabidopsis thaliana, partial (8%)
Length = 1019
Score = 166 bits (419), Expect = 1e-41
Identities = 96/242 (39%), Positives = 141/242 (57%), Gaps = 10/242 (4%)
Frame = +2
Query: 32 EQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESYSRFEEFVFSVLYSREAAGNHSINT 91
+ A TS+LSKRWT+LWCFVP LDF+ K D ES+ F +F +V+ RE ++SI++
Sbjct: 98 KDAVTTSVLSKRWTNLWCFVPFLDFSDIKLADHESFLWFNQFFCTVMLFRETYASNSIDS 277
Query: 92 FILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNIHLYPH------VPLNGEETILPKFP 145
F LDI+Y + L I ++ W+ ++ K V+ ++L+ + V + +T+ PK P
Sbjct: 278 FSLDIQY--AHLNYFSILRLNNWLYLLGKRNVKYLNLHLNFLNALLVDVQHRKTLTPKLP 451
Query: 146 MSSILSCTTLVVLKLRWFNLTVVSDLSI----RLPSLKTLHLKEIYFDQQRDFMMLLDGC 201
S+I +C TLVVL + WF S S+ PSLKTLH IYF+ DF++LL GC
Sbjct: 452 -STIFTCKTLVVLNISWFAFKGFSFSSVGFGFGFPSLKTLHFNHIYFNHLSDFLLLLAGC 628
Query: 202 PVLEDLQLCYIYMTRQSHHSLDDFESSSMLKKLNRADITDCECYFPVKSLSNLEFLRIKL 261
PVLED + C+++ + + ES+ L L R DI D P+K+L N FLRI+L
Sbjct: 629 PVLEDFKACHVFTLEEEEEATQ--ESTLNLSNLIRTDIIDTNFDIPMKALFNSVFLRIQL 802
Query: 262 SE 263
+
Sbjct: 803 CQ 808
>BQ124147 similar to GP|10177836|dbj emb|CAB62440.1~gene_id:MCD7.13~similar
to unknown protein {Arabidopsis thaliana}, partial (11%)
Length = 677
Score = 154 bits (388), Expect = 6e-38
Identities = 107/254 (42%), Positives = 130/254 (51%), Gaps = 1/254 (0%)
Frame = +1
Query: 11 IDRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESYSRF 70
+DRIS PDDIL+ ILS LP +QA VTS+LSKRW +LWC VP L+F TK Y
Sbjct: 22 VDRISILPDDILVHILSPLPTKQAFVTSVLSKRWKNLWCLVPALEFVGTKTVTVSKY--- 192
Query: 71 EEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNIHLYP 130
+ SR+AAGNH + H W
Sbjct: 193 -------VVSRQAAGNHYM----------------------HNW---------------- 237
Query: 131 HVPLNGEETILPKFPMSSILSCTTLVVLKL-RWFNLTVVSDLSIRLPSLKTLHLKEIYFD 189
E I P+FP ++I + TLV+LKL F + + IRLPSLKTLHLK+I F
Sbjct: 238 -------ERIYPEFP-NTIFTRETLVILKLSELFMGSGFCNYLIRLPSLKTLHLKDIEFQ 393
Query: 190 QQRDFMMLLDGCPVLEDLQLCYIYMTRQSHHSLDDFESSSMLKKLNRADITDCECYFPVK 249
Q D LL+GCPVLEDLQL I L L KLNRADI C+C +K
Sbjct: 394 QYGDLDCLLEGCPVLEDLQLYDISYV----SLLFSNACRKTLTKLNRADIIQCDCGVRMK 561
Query: 250 SLSNLEFLRIKLSE 263
+LSN+EFL IKLS+
Sbjct: 562 ALSNVEFLHIKLSK 603
>BG450859 weakly similar to GP|21553400|gb| unknown {Arabidopsis thaliana},
partial (11%)
Length = 549
Score = 142 bits (357), Expect = 2e-34
Identities = 88/180 (48%), Positives = 109/180 (59%), Gaps = 1/180 (0%)
Frame = +2
Query: 1 MSKQKISTSVIDRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTK 60
MS + ST+ +DRI + PD+ILI ILS +P +QA TSILSKRW HLW +VP LDFT+T
Sbjct: 89 MSSPENSTATVDRIGTLPDEILIHILSFVPTKQAFTTSILSKRWIHLWRYVPILDFTETN 268
Query: 61 WKDQESYSRFEEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVK 120
+D++S RFEEF+FSV+ SR +AGNHSINTFILDI+ SS L H V
Sbjct: 269 LEDRDSVIRFEEFIFSVIRSRHSAGNHSINTFILDIQRHSSRL--------HALV----- 409
Query: 121 SKVQNIHLYPHVPLNGEETILPKFPMSSILSCTTLVVLKLRWFNLTVVSDLS-IRLPSLK 179
TI P+FP+ IL TTLV LKL F++ L+ I LPSLK
Sbjct: 410 -------------FGNSNTIAPEFPIP-ILGSTTLVXLKLASFDMGADLFLNLITLPSLK 547
>TC89043 similar to GP|10178241|dbj|BAB11673. gene_id:MDJ22.9~unknown
protein {Arabidopsis thaliana}, partial (9%)
Length = 1413
Score = 111 bits (277), Expect = 4e-25
Identities = 84/259 (32%), Positives = 129/259 (49%), Gaps = 8/259 (3%)
Frame = +2
Query: 11 IDRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESYSRF 70
+DRIS PDDIL RILS LP + A T++LSKRWT L+ + L F D++++ RF
Sbjct: 59 VDRISHLPDDILCRILSFLPTKLAFTTTVLSKRWTPLYKLLTSLSFDDESVLDEDTFLRF 238
Query: 71 EEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNIHLYP 130
FV +V +S + +N + ++ N+ W+ + V+N +L
Sbjct: 239 CRFVDTVTFSTDLIKTLHLNCGSPNWKH----------FNLDLWIGTAKRHPVENFNLV- 385
Query: 131 HVPLNGEETILPKFPMSSILSCTTLVVLKLRWFNLTVVSDLSIRLPSLKTLHLKEIYFDQ 190
G +P P SI +LVVLKL+ + +V ++++ LP LK LHL +Y
Sbjct: 386 -----GTWRSIPLRP--SIFRFPSLVVLKLKTLKI-IVGNITVDLPLLKILHLDRVYLKN 541
Query: 191 QRDFMMLLDGCPVLEDLQLCYIYMTRQSHHSLDDFESS--------SMLKKLNRADITDC 242
+ +F +L GCPVLEDL + IY + + F S +L KL R I
Sbjct: 542 KTNFNKILYGCPVLEDL-IANIYYKEPTPEPDEVFTLSKATATGEFKILPKLIRVQINAD 718
Query: 243 ECYFPVKSLSNLEFLRIKL 261
E P +++ N+EFL + +
Sbjct: 719 E--VPFRAIHNVEFLALTM 769
>TC88413 weakly similar to GP|10176786|dbj|BAB09900.
gene_id:MIK19.29~pir||T01344~similar to unknown protein
{Arabidopsis thaliana}, partial (10%)
Length = 1288
Score = 98.6 bits (244), Expect = 3e-21
Identities = 89/289 (30%), Positives = 139/289 (47%), Gaps = 4/289 (1%)
Frame = +1
Query: 12 DRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKW-KDQESYSRF 70
DRIS PD++L RILS LP +Q VTS+LS+RW L + +++ T + D+++Y R+
Sbjct: 247 DRISILPDELLCRILSLLPAKQIMVTSLLSRRWRSLRPRMTEINIDDTSYIHDRDAYDRY 426
Query: 71 EEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNIHLYP 130
+ L+ + IL + L L W++ + KVQ
Sbjct: 427 YHVIALFLFEMKIHHPIMKTVTILSASPFFNPLPL--------WLNCL---KVQ------ 555
Query: 131 HVPLNGEETILPKFPMSSILSCTTLVVLKLRWFNLTVVSDLSIRLPSLKTLHLKEIYFDQ 190
H+ + T+ P +L+ T LVVLKL + V S LPSLK LHL +++F +
Sbjct: 556 HLDVTSSATLCLCVPYK-VLTSTALVVLKLNALTIDYVHRSSTNLPSLKILHLTQVHFLK 732
Query: 191 QRDFMMLLDGCPVLEDLQLCYIYMTRQSHHSLDDFESSSMLKKLNRADITD---CECYFP 247
+ + +L P+LEDL L + +T + + DD + KL RADI+D P
Sbjct: 733 LKFLIKILSMSPLLEDLLLKDLQVT-DNTLAQDDAAALKPFPKLLRADISDSCISPLLLP 909
Query: 248 VKSLSNLEFLRIKLSEVCFIIEWNESEQCDSFVFLIFNFIELNFTLIFY 296
+K N+ FLR +L + EQ D+ FL ++L+F +Y
Sbjct: 910 LKLFYNVHFLRSQLQTL--------EEQQDT-QFLSLTHLDLSFDHGYY 1029
>AL380606
Length = 437
Score = 94.4 bits (233), Expect = 5e-20
Identities = 57/144 (39%), Positives = 84/144 (57%), Gaps = 6/144 (4%)
Frame = +1
Query: 89 INTFILDIEYDSSELLLDG-IKNIHKWVDIVVKSKVQNIHLYPHVPLNGEETILPKFPMS 147
I++F L+I+Y S L + N+ KWV+ VV+ ++ +HL VPL + P FP
Sbjct: 4 IDSFHLNIQYSDSHLAYNKEFPNLTKWVNSVVQRGLKYLHLRLRVPLPDHFSGYPYFPKL 183
Query: 148 --SILSCTTLVVLKLRWFNLTVVSDLSI--RLPSLKTLHLKEIYFDQQRDFMMLLDGCPV 203
SI +C TLV L L WF + S S+ PSLKTL L+ I F + RDFM+LL GCP+
Sbjct: 184 PISIFTCKTLVSLNLSWFRVDGFSFTSVGFEFPSLKTLSLRLIKFSEVRDFMLLLAGCPI 363
Query: 204 LEDLQLCYIYM-TRQSHHSLDDFE 226
LEDL + ++ + H++ +F+
Sbjct: 364 LEDLHVALVFFYYEEDSHTVQEFK 435
>TC82492 similar to GP|14596145|gb|AAK68800.1 Unknown protein {Arabidopsis
thaliana}, partial (7%)
Length = 1286
Score = 69.7 bits (169), Expect(2) = 6e-19
Identities = 61/163 (37%), Positives = 88/163 (53%), Gaps = 16/163 (9%)
Frame = +3
Query: 149 ILSCTTLVVLKLRWFNLTVVSD-LSIRLPSLKTLHLKEIYF-DQQRDFMMLLDGCPVLED 206
I + TLV+LKL+ NL +V+D L LPSLKTL L+ YF +Q+ DF+ LL+ CP+LED
Sbjct: 354 IFTSRTLVILKLQ--NLKIVADNLCFDLPSLKTLVLEREYFKNQKNDFVKLLNACPILED 527
Query: 207 LQLCY---IYMTRQSHHSLDDFESSSMLKKLNRADITDCECYFPVKSLSNLEFLRI---- 259
L Y M R+ ++ + +F+ S L KL RA I + P +++N+E+L I
Sbjct: 528 LHTYYPRLRIMKRKDNNEVQEFK-SLFLSKLVRAYIHSMD--VPFDAINNVEYLCIIQDE 698
Query: 260 -------KLSEVCFIIEWNESEQCDSFVFLIFNFIELNFTLIF 295
+ E F I+ E+ D VF IEL F +F
Sbjct: 699 EERSYGMNIEEHSFEIKIEEASFKDIPVFQNLICIELWFFSVF 827
Score = 41.6 bits (96), Expect(2) = 6e-19
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Frame = +1
Query: 18 PDDILIRILSSLPIEQACVTSILSKRWTHL--------WCFVPDLDFTKTKWKDQESYSR 69
P+++L ILS LP + A T +LSKRWT L + VP+LD E++
Sbjct: 7 PNELLRHILSFLPTKLAFTTMLLSKRWTPLSYTPSVVRFDVVPELD---------EAFHS 159
Query: 70 FEEFVFSVLYSREAAGNHSINTFIL---DIEYDSSELLLDGIKNIHKWVDIVVKSKVQN 125
F FV +++ S + N I TF L ++ DS + + ++ WV+ + +V+N
Sbjct: 160 FCLFVDTLMLSLRSL-NQPIKTFSLNFRNVVVDSDQPI------VNAWVEAALLRRVRN 315
>BM815011 similar to PIR|T49178|T491 hypothetical protein T20N10.300 -
Arabidopsis thaliana, partial (4%)
Length = 628
Score = 78.6 bits (192), Expect = 3e-15
Identities = 65/205 (31%), Positives = 95/205 (45%), Gaps = 2/205 (0%)
Frame = +2
Query: 11 IDRISSFPDDILIRILSSLP-IEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESYSR 69
IDR+SS PD +L I+S LP I LS RW HLW DL + D S+ R
Sbjct: 2 IDRLSSLPDSVLCHIMSFLPTITSVATIDRLSSRWRHLW---KDLQVFRFSSDDSYSFKR 172
Query: 70 FEEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNIHLY 129
F FV +VL R + I F E+ E ++ I WV + +++ + L
Sbjct: 173 FAFFVNAVLALRR---SRHIRKFDFTFEFREYE-----VECIEMWVHAAIGPRLEELDLD 328
Query: 130 PHVPLNGEETILPKFPMSSILSCTTLVVLKLRW-FNLTVVSDLSIRLPSLKTLHLKEIYF 188
+ E I P+S SC LV L+L +N+ L ++ PSLK ++L +
Sbjct: 329 IY-----EADI--NLPLSFFTSCNNLVSLRLGGEYNMKFKHSL-VQFPSLKKVYLSTMDS 484
Query: 189 DQQRDFMMLLDGCPVLEDLQLCYIY 213
D + L GCP L+DL++ +Y
Sbjct: 485 D---SIVAFLSGCPKLQDLEIFSVY 550
>BG646112 weakly similar to GP|10177368|dbj contains similarity to heat shock
transcription factor HSF30~gene_id:K16L22.13, partial
(5%)
Length = 742
Score = 71.2 bits (173), Expect = 5e-13
Identities = 67/225 (29%), Positives = 106/225 (46%), Gaps = 18/225 (8%)
Frame = +2
Query: 10 VIDRISSFPDDILIRILSSLPIEQACV-TSILSKRWTHLW----CFVPDLDFTKTKWKDQ 64
VIDR+SS PD +L ILS LP + + + TS++S+RW HLW FV D D + ++
Sbjct: 8 VIDRMSSLPDSLLCHILSFLPTKTSVMTTSLVSRRWRHLWEHLNVFVFD-DKSNCNCRNP 184
Query: 65 ESYSRFEEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQ 124
+ + +F FV SVL R+ + I F L +S++ + ++ WV + ++
Sbjct: 185 KKFRKFAFFVSSVLSLRK---SRHIRKFHLTC--CTSDVYSFPGECVYMWVRAAIGPHLE 349
Query: 125 NIHLYPHVPLNGEETILPKFPMSSILSCTTLVVLKLRWFNLTVVSDLSIRLPSLKTLHLK 184
++ L + LP S+L+CT LV L L +I PSLK L ++
Sbjct: 350 DLSLNITNCHGDDMVYLP----PSLLNCTNLVSLSLFGLIHLKFQPSAIHFPSLKMLKVE 517
Query: 185 EIYFDQQRD-----------FMMLLDGCPVLEDLQLCY--IYMTR 216
+ D ++ L GCPVLE L + ++TR
Sbjct: 518 FSILEHNIDIEDFGKHLTDSILVFLSGCPVLETLDTYFSPYFLTR 652
>TC91590 weakly similar to GP|10178235|dbj|BAB11667. gene_id:MDJ22.3~unknown
protein {Arabidopsis thaliana}, partial (9%)
Length = 712
Score = 68.6 bits (166), Expect = 3e-12
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Frame = +2
Query: 12 DRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESYSRFE 71
D IS+ + IL +ILS +PI A TS+LS+RW +W + +LDF + ++ + E
Sbjct: 164 DMISTLHESILSQILSFIPIVDAVSTSVLSRRWVDVWKCITNLDFDDSLLGSRKKRMQKE 343
Query: 72 EFVFSVLYSREAAGNHSINTFILDI---EYDSSELLLDGIKNIHKWVDIVVKSKVQNIHL 128
+FV V N SI +F L + +YD+S+L +W+ +++ +VQ +H+
Sbjct: 344 QFVNFVEKVLIHFTNSSIQSFSLSLTSHQYDASKL--------SEWISFILERRVQKLHI 499
Query: 129 YPHVPLNGEETILPKFPMSSILSCTTLVVLKLRWFNLTVVSDLSIRLPSLKTL 181
++ LP S+ C +LV L L+ T+ +S+ L +L+ L
Sbjct: 500 Q-----YADKVFLPS---DSLFRCNSLVDLTLQ-MRCTLSLPISVCLQNLQKL 631
>BI311381 weakly similar to PIR|T46128|T461 hypothetical protein T2J13.140 -
Arabidopsis thaliana, partial (12%)
Length = 803
Score = 63.5 bits (153), Expect = 1e-10
Identities = 41/87 (47%), Positives = 50/87 (57%)
Frame = +1
Query: 12 DRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESYSRFE 71
D IS+ PD IL ILS L A TS+LSKRW HLW V L F T+ D S F
Sbjct: 103 DIISTLPDAILCHILSFLETNYADATSVLSKRWNHLWRSVHTLRFI-TQVTDHNSNHDFI 279
Query: 72 EFVFSVLYSREAAGNHSINTFILDIEY 98
+FV+SVL SR+ A I TF L++ +
Sbjct: 280 DFVYSVLLSRDPA--LPIKTFHLEVTF 354
>TC87984 weakly similar to GP|10177368|dbj|BAB10659. contains similarity to
heat shock transcription factor HSF30~gene_id:K16L22.13,
partial (5%)
Length = 696
Score = 62.0 bits (149), Expect = 3e-10
Identities = 64/218 (29%), Positives = 101/218 (45%), Gaps = 19/218 (8%)
Frame = +3
Query: 11 IDRISSFPDDILIRILSSLPIEQACV--TSILSKRWTHLWCFVPDLDFTKT------KWK 62
IDRI+ P+ +L ILS LP + CV T ++S++W +LW + LDF + ++
Sbjct: 102 IDRINQLPNSLLHHILSFLP-TKTCVQTTPLVSRKWRNLWKNLEALDFCDSSSPQIYEFD 278
Query: 63 DQESYSRFEEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKN--IHKWVDIVVK 120
+ E + F FV +VL R+ + + F L + + LD N I W++ +
Sbjct: 279 NDEQFLIFSVFVNTVLTLRK---SRVVRKFCLSCYH----VQLDPFYNHSIDTWINATIG 437
Query: 121 SKVQNIHL-------YPHVPLNGEETILPKFPMSSILSCTTLVVLKLRWFNLTVVSDLS- 172
++ HL + VPL S+ SC LV L + + + D S
Sbjct: 438 PNLEEFHLTLLTAAGFNRVPL-------------SLFSCPNLVSLSFNDYIILQLQDNSK 578
Query: 173 IRLPSLKTLHLKEIY-FDQQRDFMMLLDGCPVLEDLQL 209
I LPSLK L L ++Y D + M PVLE+L++
Sbjct: 579 ICLPSLKLLQLLDMYNLDLKFCEMPFSLAVPVLENLEI 692
>TC84389 weakly similar to GP|10177368|dbj|BAB10659. contains similarity to
heat shock transcription factor HSF30~gene_id:K16L22.13,
partial (8%)
Length = 692
Score = 62.0 bits (149), Expect = 3e-10
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = +3
Query: 7 STSVIDRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQES 66
S S DRIS+ PD I+ ILS +P + A +TSILSKRW LW V L F +++ ES
Sbjct: 252 SISTEDRISALPDPIIWHILSFVPTKTAAITSILSKRWNPLWLSVLILHFEDETFQNMES 431
Query: 67 YSRFEEFVF 75
+S F VF
Sbjct: 432 FSHFMSSVF 458
>CA990540 weakly similar to GP|10092259|gb| hypothetical protein; 40655-42260
{Arabidopsis thaliana}, partial (9%)
Length = 761
Score = 61.6 bits (148), Expect = 4e-10
Identities = 54/193 (27%), Positives = 94/193 (47%), Gaps = 7/193 (3%)
Frame = +1
Query: 8 TSVIDRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESY 67
T +RIS PD IL+ I+S L A T ILSKRW L + L + + W D+ S+
Sbjct: 85 TEAGNRISELPDCILLHIMSFLEARDAVRTCILSKRWKDLCKRLTTLTYIPS-W-DENSF 258
Query: 68 SRFEEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNIH 127
F+ +V S SR+ + S+ +D ++ +G +++H + + +QN++
Sbjct: 259 KNFKSWVLS---SRDQ--SCSLWNLTIDTQFQ------EGEEDLHTLIQYALFHNLQNLN 405
Query: 128 LYPHVPLNGEETILPKFPMSSILSCTTLVVLKLRWFN-------LTVVSDLSIRLPSLKT 180
+ + L + +LP IL+ +L L+L + + + S+ LP+L+T
Sbjct: 406 IKINPSLTPKSDLLP-----LILASNSLTFLELSYRRGGSIAAARSPILPKSLHLPALRT 570
Query: 181 LHLKEIYFDQQRD 193
LHL+ + F RD
Sbjct: 571 LHLEYVNFVATRD 609
>TC82690 weakly similar to GP|9802755|gb|AAF99824.1| Unknown protein
{Arabidopsis thaliana}, partial (12%)
Length = 762
Score = 60.1 bits (144), Expect = 1e-09
Identities = 59/200 (29%), Positives = 94/200 (46%), Gaps = 2/200 (1%)
Frame = +1
Query: 12 DRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESYSRFE 71
DRISS P I+ +ILS LPI++A TSILS +W + W +P+L F D + S
Sbjct: 115 DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVF------DSQCISDTS 276
Query: 72 EFVFSVLYSREAAGNHSINTFILDI-EYDSSELLLDGIKNIHKWVDIVVKSKVQNIHLYP 130
E + + +H + I ++ S L G+ +I +W + + V+ L
Sbjct: 277 EDLLVIKSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVL-- 450
Query: 131 HVPLNGEETILPKFPMSSILSCTTLVVLKLRWFNLTVVSDLSIR-LPSLKTLHLKEIYFD 189
G+ +P S + SC L L+L FN ++ + + +LK+L L+ +
Sbjct: 451 -EIWKGQRYKIP----SCLFSCQGLHHLEL--FNCWLIPPSTFQGFRNLKSLDLQHVTLS 609
Query: 190 QQRDFMMLLDGCPVLEDLQL 209
Q F L+ CP+LE L L
Sbjct: 610 QDA-FENLISTCPLLERLTL 666
>TC92783 similar to PIR|T49020|T49020 hypothetical protein F3C22.70 -
Arabidopsis thaliana (fragment), partial (7%)
Length = 679
Score = 57.4 bits (137), Expect = 7e-09
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Frame = +1
Query: 12 DRISSFPDDILIRILSSLPIEQACVT-SILSKRWTHLWCFVPDLDFTKTKWK---DQESY 67
D I++ PD +L ILS LP + T ++S+RW HLW + DF K + +
Sbjct: 94 DWINTLPDSLLCHILSFLPTKITVTTIPLVSRRWRHLWENLQVFDFYLKYNKHTINNNDF 273
Query: 68 SRFEEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNIH 127
+F FV SVL R + + + SE+ +I W+ S +Q +
Sbjct: 274 RKFAAFVNSVLSIRRSRDIRKMR-----LSCGHSEVDPFFSNSIDSWIRSATGSCLQELD 438
Query: 128 LYPHVPLNGEETILPKFPMSSILSCTTLVVLKLRWFNLTVVSDLS--IRLPSLKTLHLKE 185
+ + E + F ++ + CT LV L L ++ VV + S LPSLK L L +
Sbjct: 439 I--TLFYTDREYVFSIF-LTILAPCTNLVSLSL-CGDIYVVLERSSAFFLPSLKKLQL-D 603
Query: 186 IYFDQQRDFMMLLDGCPVLEDLQL 209
I + + LL CP+LE L+L
Sbjct: 604 IGYVEMNSMDNLLSSCPILETLEL 675
>BG581615 similar to GP|10177368|dbj contains similarity to heat shock
transcription factor HSF30~gene_id:K16L22.13, partial
(3%)
Length = 825
Score = 57.4 bits (137), Expect = 7e-09
Identities = 48/157 (30%), Positives = 71/157 (44%), Gaps = 3/157 (1%)
Frame = +3
Query: 7 STSVIDRISSFPDDILIRILSSLPIEQACVT-SILSKRWTHLWCFVPDLDFTKTKWKDQE 65
+T DR+S PD IL ILS LP + T +++S+RW +LW DF
Sbjct: 300 ATGGTDRLSGLPDSILCHILSFLPTRTSVATMNLVSRRWRNLWKHAQVFDFDFDCDGVSA 479
Query: 66 SYSRFEEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKN--IHKWVDIVVKSKV 123
Y RF FV SVL R+ + I F L I D + I+N + W+ +
Sbjct: 480 DYERFRFFVNSVLALRK---SRDIQKFHLTITSDCQ--FMSDIQNNYVEMWICAATGPHL 644
Query: 124 QNIHLYPHVPLNGEETILPKFPMSSILSCTTLVVLKL 160
Q + L +P ++ + K S ++C+ LV L L
Sbjct: 645 QELSLI--IPSYADQIV--KLSPSLFMNCSNLVSLSL 743
>TC82256 similar to GP|20042913|gb|AAM08741.1 Unknown protein {Oryza sativa
(japonica cultivar-group)}, partial (9%)
Length = 897
Score = 57.4 bits (137), Expect = 7e-09
Identities = 64/217 (29%), Positives = 92/217 (41%), Gaps = 18/217 (8%)
Frame = +3
Query: 12 DRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESYSRFE 71
D IS D +L+ ILS L QA T +LSKRW LW + + + + ++ RF+
Sbjct: 219 DFISDLTDSVLLHILSFLNAIQAVQTCVLSKRWIILWKSLSTITLRSSYSRPRK---RFD 389
Query: 72 EFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNIHLYPH 131
EFV + R+ G+ +I+T L + LL K ++ V VQ++ +
Sbjct: 390 EFVSRIFSLRD--GSTAIHTLDLYRRHSMKHSLL------RKIIEYAVSHNVQHLRI--- 536
Query: 132 VPLNGEETILPKFPMSSILSCTTLVVLKLRWFNLTV------VSDLSIRLPSLKTLHLKE 185
+ FP S + SC TL L L F V S+ LPSL L LK
Sbjct: 537 ----DYTCHIENFP-SCLFSCHTLKSLNLSGFLYNTFVHHKPVFRNSLNLPSLTNLSLKY 701
Query: 186 IYFDQQRD--------FMML----LDGCPVLEDLQLC 210
F + + F ML +D C VL+ LC
Sbjct: 702 FAFARSDNGCVEPFSTFKMLNSLIIDCCIVLDAQNLC 812
>BF644690 weakly similar to GP|20042923|gb Putative copia-type polyprotein
{Oryza sativa (japonica cultivar-group)}, partial (2%)
Length = 690
Score = 56.6 bits (135), Expect = 1e-08
Identities = 48/185 (25%), Positives = 88/185 (46%), Gaps = 8/185 (4%)
Frame = +1
Query: 12 DRISSFPDDILIRILSSLPIEQACVTSILSKRWTHLWCFVPDLDFTKTKWKDQESYSRFE 71
DR+S P+ +++ ILS L + T +LS+RW +W +P L +++ ++ +FE
Sbjct: 166 DRLSDLPNSVILCILSFLNTKDGVRTCVLSRRWKDIWKHIPTLVLDSSRF---DTVRQFE 336
Query: 72 EFVFSVLYSRE-AAGNHSIN-TFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNIHLY 129
F+ +L R+ HS++ I +E+ + +LD + + K+K+Q + ++
Sbjct: 337 IFMSKILTLRDNTIALHSLDFDHIGKMEHQLLQKILDYVYS--------HKTKLQRLRIF 492
Query: 130 PHVPLNGEETILPKFPMSSILSCTTLVVLKLRWFNL------TVVSDLSIRLPSLKTLHL 183
H N I M + SC L L+L + T++ S+ LP+L+TL L
Sbjct: 493 VH---NDNGLI-----MQCVSSCKNLTSLRLSIYPXMSFCVKTILFPKSLNLPALETLDL 648
Query: 184 KEIYF 188
F
Sbjct: 649 SNFTF 663
>AW690384 similar to GP|23496006|gb hypothetical protein {Plasmodium
falciparum 3D7}, partial (1%)
Length = 681
Score = 52.8 bits (125), Expect = 2e-07
Identities = 35/122 (28%), Positives = 58/122 (46%), Gaps = 5/122 (4%)
Frame = +3
Query: 12 DRISSFPDDILIRILSSLPIE-QACVTSILSKRWTHLWCFVPDLDFTKTKWKDQ----ES 66
DR+SS PD +L ILS LP + C S++S R+ HLW + D DF + D E+
Sbjct: 276 DRLSSLPDSLLCHILSFLPTKTSVCTMSLVSHRYLHLWKHLQDFDFYDVYYPDSDEEAEN 455
Query: 67 YSRFEEFVFSVLYSREAAGNHSINTFILDIEYDSSELLLDGIKNIHKWVDIVVKSKVQNI 126
+ F FV +VL R + + S+L +++ W+ V + ++++
Sbjct: 456 FKDFAIFVNAVLSMRSTRDIRKMR-----LSCGQSQLDSFXERSVDTWIRTXVXAHLEDL 620
Query: 127 HL 128
L
Sbjct: 621 XL 626
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.325 0.139 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,465,370
Number of Sequences: 36976
Number of extensions: 200993
Number of successful extensions: 1608
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 1573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1587
length of query: 321
length of database: 9,014,727
effective HSP length: 96
effective length of query: 225
effective length of database: 5,465,031
effective search space: 1229631975
effective search space used: 1229631975
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC135799.6