Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135566.8 - phase: 0 
         (269 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC77705 similar to GP|21553857|gb|AAM62950.1 unknown {Arabidopsi...   515  e-147
TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor ...    44  8e-05
BQ750934 similar to PIR|T19673|T19 hypothetical protein C33B4.3 ...    39  0.003
TC89181 similar to PIR|T47628|T47628 sugar-phosphate isomerase-l...    36  0.014
BE324670 similar to PIR|T06782|T06 extensin - soybean, partial (...    34  0.051
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar...    33  0.15
BQ138304 homologue to GP|6688833|emb putative calcium P-type ATP...    32  0.33
TC89754 similar to GP|21618273|gb|AAM67323.1 unknown {Arabidopsi...    32  0.33
AW257087 homologue to GP|6683126|dbj KIAA0339 protein {Homo sapi...    31  0.44
TC92985 homologue to PIR|D96507|D96507 hypothetical protein T12C...    31  0.57
TC76717 similar to PIR|T10863|T10863 extensin precursor - kidney...    30  0.97
TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreu...    30  1.3
TC76721 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum s...    30  1.3
BG449674 weakly similar to GP|8885520|dbj streptococcal hemagglu...    30  1.3
TC86473 similar to PIR|E84828|E84828 probable WD-40 repeat prote...    29  1.7
BE324834 similar to GP|8132441|gb| extensin {Pisum sativum}, par...    29  2.2
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {...    29  2.2
CA917294 similar to GP|6691680|dbj| Mga23 {Streptococcus pyogene...    29  2.2
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr...    28  3.7
TC89827 similar to GP|22654962|gb|AAM98074.1 AT5g60420/muf9_70 {...    28  3.7

>TC77705 similar to GP|21553857|gb|AAM62950.1 unknown {Arabidopsis
           thaliana}, partial (58%)
          Length = 1139

 Score =  515 bits (1327), Expect = e-147
 Identities = 269/269 (100%), Positives = 269/269 (100%)
 Frame = +1

Query: 1   MACALQATITTNTCAFSTRKFSLKQQKINKRSSCMFIVRASSESDCNDEECAPDKEVGKV 60
           MACALQATITTNTCAFSTRKFSLKQQKINKRSSCMFIVRASSESDCNDEECAPDKEVGKV
Sbjct: 166 MACALQATITTNTCAFSTRKFSLKQQKINKRSSCMFIVRASSESDCNDEECAPDKEVGKV 345

Query: 61  SMEWLAEEKTKVVGTYPPRRKQGWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTAGTS 120
           SMEWLAEEKTKVVGTYPPRRKQGWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTAGTS
Sbjct: 346 SMEWLAEEKTKVVGTYPPRRKQGWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTAGTS 525

Query: 121 SDGAQNTAAIAAGLALISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEIT 180
           SDGAQNTAAIAAGLALISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEIT
Sbjct: 526 SDGAQNTAAIAAGLALISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEIT 705

Query: 181 QAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISV 240
           QAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISV
Sbjct: 706 QAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISV 885

Query: 241 PPESSPAEVSQVQVESQIQTETSSVDIVS 269
           PPESSPAEVSQVQVESQIQTETSSVDIVS
Sbjct: 886 PPESSPAEVSQVQVESQIQTETSSVDIVS 972


>TC80046 similar to SP|P22699|GUN6_DICDI Endoglucanase precursor (EC
           3.2.1.4) (Endo-1 4-beta-glucanase) (Spore germination
           protein 270-6), partial (11%)
          Length = 643

 Score = 43.5 bits (101), Expect = 8e-05
 Identities = 24/93 (25%), Positives = 43/93 (45%), Gaps = 1/93 (1%)
 Frame = +3

Query: 173 EFKTQEITQAPS-VSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTES 231
           E  T+  T+ P+  STET   +S  T ++ PT+T   +  ++ +  P +T   +S +T +
Sbjct: 279 ETSTETSTETPTETSTETPTETSTETSTETPTETSTETPTETSTETPTETSTETSTETST 458

Query: 232 VATDASISVPPESSPAEVSQVQVESQIQTETSS 264
                S     E++P         +   TETS+
Sbjct: 459 ETPPPSTETSTETTPPSTETSTETTPPSTETST 557



 Score = 43.5 bits (101), Expect = 8e-05
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
 Frame = +3

Query: 171 INEFKTQEITQAPSVSTETELSSSVPTES--DVPTQ--TELSSSVQSESIAPAKTELSSS 226
           + +  T  ++ +P+  T TE S+  PTE+  + PT+  TE S+   +E+     TE S+ 
Sbjct: 237 VTDTSTNTVSPSPT-ETSTETSTETPTETSTETPTETSTETSTETPTETSTETPTETSTE 413

Query: 227 IQTES---VATDASISVPPESSPAEVSQVQVESQIQTETS 263
             TE+    +T+ S   PP S+          ++  TET+
Sbjct: 414 TPTETSTETSTETSTETPPPSTETSTETTPPSTETSTETT 533


>BQ750934 similar to PIR|T19673|T19 hypothetical protein C33B4.3 -
           Caenorhabditis elegans, partial (1%)
          Length = 627

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 34/151 (22%), Positives = 64/151 (41%)
 Frame = +2

Query: 92  TAGQTNIYSVEPAVYVAESAISSGTAGTSSDGAQNTAAIAAGLALISIAAASSILLQVGK 151
           T   +++ +   AV+   SA+++GT  T+   ++      A  +L +++A +S    V  
Sbjct: 173 TTASSSVETTAAAVFPTTSAVANGTL-TAVTASETVTDEVASSSLSTLSATNS---SVTS 340

Query: 152 NSPPQVQKVEYSGPSLSYYINEFKTQEITQAPSVSTETELSSSVPTESDVPTQTELSSSV 211
            +P    + E + P  S      +T + T     S+    SSS      +  Q   S + 
Sbjct: 341 AAPSFTAEAETTSPVSSASSTSLETLDATTTAVPSSSIPESSSTSLPPTLVPQNTTSPAS 520

Query: 212 QSESIAPAKTELSSSIQTESVATDASISVPP 242
              SI  + T  SSS  + + ++ +S S  P
Sbjct: 521 SPSSITTSTTSSSSSSSSSTTSSSSSSSPTP 613


>TC89181 similar to PIR|T47628|T47628 sugar-phosphate isomerase-like protein
           - Arabidopsis thaliana, partial (54%)
          Length = 817

 Score = 36.2 bits (82), Expect = 0.014
 Identities = 25/82 (30%), Positives = 42/82 (50%), Gaps = 6/82 (7%)
 Frame = +3

Query: 172 NEFKTQEITQAPSVSTETE---LSSSVPTESDVPT---QTELSSSVQSESIAPAKTELSS 225
           N+  T  +T+ PS+ +      +S+S  TES +P       LSS++ + S +PA    +S
Sbjct: 69  NKALTI*LTKPPSLISSNPNKTISTSSSTESTIPKPYHSPALSSTLPAPSSSPASANPAS 248

Query: 226 SIQTESVATDASISVPPESSPA 247
           S+      +  S+S PP S P+
Sbjct: 249 SLTKSHKHSSPSVSAPPSSPPS 314


>BE324670 similar to PIR|T06782|T06 extensin - soybean, partial (27%)
          Length = 397

 Score = 34.3 bits (77), Expect = 0.051
 Identities = 29/91 (31%), Positives = 41/91 (44%)
 Frame = +1

Query: 135 ALISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEITQAPSVSTETELSSS 194
           A + +   SS  LQV  +S   +Q    S PSL   I+   TQE  Q   VS  T  S  
Sbjct: 1   ARVQVQITSSSSLQV*ISSTTSLQV*VTSSPSLQVQISTTTTQETIQ---VSITTTTSLQ 171

Query: 195 VPTESDVPTQTELSSSVQSESIAPAKTELSS 225
           V   S    Q ++S++   E+I  + T  +S
Sbjct: 172 VQVTSSPSLQVQISTTTTQETIQVSITTTTS 264


>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
           thaliana}, partial (3%)
          Length = 805

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = +3

Query: 185 VSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISVPPES 244
           VST T   +S P  S VPT T            PA T  SS + T S     + S+P  +
Sbjct: 171 VSTTTSPPASTPASSPVPTTTS----------PPAPTPASSPVSTNSPTASPAGSLPAAA 320

Query: 245 SPAEVS 250
           +P+  S
Sbjct: 321 TPSPSS 338


>BQ138304 homologue to GP|6688833|emb putative calcium P-type ATPase
           {Neurospora crassa}, partial (13%)
          Length = 412

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 24/62 (38%), Positives = 30/62 (47%), Gaps = 10/62 (16%)
 Frame = +1

Query: 195 VPTESDVP------TQTELSSSVQSESIAPAKTELSSSIQTESVATDA----SISVPPES 244
           VPT    P      T T L   V    +AP+ T LSSS  T S+ T A    S S+PP++
Sbjct: 184 VPTSPSSPPTWFWSTTTSLRLRVLLRRVAPSTTTLSSSSVTSSLPTLARSSPSSSLPPQA 363

Query: 245 SP 246
            P
Sbjct: 364 CP 369


>TC89754 similar to GP|21618273|gb|AAM67323.1 unknown {Arabidopsis
           thaliana}, partial (88%)
          Length = 759

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 31/114 (27%), Positives = 50/114 (43%)
 Frame = +2

Query: 154 PPQVQKVEYSGPSLSYYINEFKTQEITQAPSVSTETELSSSVPTESDVPTQTELSSSVQS 213
           PP  Q +  S  S S           + +PS +    +S+S P+ S  PT +  SSS  +
Sbjct: 110 PPPHQSIPSSTSSAS-----------SPSPSSAHHASVSNSHPSPSPPPTSSSPSSSSPT 256

Query: 214 ESIAPAKTELSSSIQTESVATDASISVPPESSPAEVSQVQVESQIQTETSSVDI 267
              +PA +  SSS    S    A   +P   +PA +SQ      + T ++S+ +
Sbjct: 257 SWSSPASSTTSSSNHPVS----AQCKIP---TPAPLSQSSSCPDVLTVSTSLKV 397


>AW257087 homologue to GP|6683126|dbj KIAA0339 protein {Homo sapiens},
           partial (2%)
          Length = 466

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
 Frame = +1

Query: 108 AESAISSGTAGTSSDGAQNTAAIAAGLALISIAA------ASSILLQVGKNSPPQVQKVE 161
           + S+ SS ++ +SSD   ++ + A     + +        A S   ++  +S        
Sbjct: 7   SSSSSSSSSSSSSSDSDSDSESEAPAKKAVPVVTKTAPTHAKSASSKMEVDSDSDSDSDS 186

Query: 162 YSGPSLSYYINEFKTQEITQAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKT 221
            S  S S  ++  K   ++ A +   + E S S  ++SD  + +  SSS  S S + + +
Sbjct: 187 SSSSSTSSSVSSVKKPAVSAAKATPAKKEESDS-DSDSDSSSSSSSSSSSSSSSSSSSSS 363

Query: 222 ELSSSIQTESVATDASISVPPESSPAEVSQVQV 254
             SSS  ++    +       + +PA+ +   V
Sbjct: 364 SSSSSSNSDDEEEEEEAKPVVKKTPAKSASTPV 462


>TC92985 homologue to PIR|D96507|D96507 hypothetical protein T12C22.10
           [imported] - Arabidopsis thaliana, partial (39%)
          Length = 663

 Score = 30.8 bits (68), Expect = 0.57
 Identities = 23/72 (31%), Positives = 35/72 (47%), Gaps = 1/72 (1%)
 Frame = +2

Query: 186 STETELSSSVPTESDVPTQTELSSSVQS-ESIAPAKTELSSSIQTESVATDASISVPPES 244
           S+ T L+  + T S    Q  +S S +S + +A A    SSS  + +     +IS PP S
Sbjct: 371 SSATNLNFPLETSSHFIPQENISMSPKSIQRVAAAAAAASSSSSSSNNDVTNTISTPPTS 550

Query: 245 SPAEVSQVQVES 256
           S + VS   + S
Sbjct: 551 SSSLVSSPSMSS 586


>TC76717 similar to PIR|T10863|T10863 extensin precursor - kidney bean,
           partial (56%)
          Length = 928

 Score = 30.0 bits (66), Expect = 0.97
 Identities = 29/95 (30%), Positives = 41/95 (42%)
 Frame = +1

Query: 137 ISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEITQAPSVSTETELSSSVP 196
           + +   SS  LQV  +S   +Q    S PSL   I+   TQE  Q  S++T T L   V 
Sbjct: 634 LQVQITSSSSLQV*ISSTTSLQV*VTSSPSLQVQISTTTTQETIQV-SITTTTSLQV*VS 810

Query: 197 TESDVPTQTELSSSVQSESIAPAKTELSSSIQTES 231
             + + T T L   V S +     + +   I T S
Sbjct: 811 PSTCLLTTTSLQV*VSSSTCLFTTSTI*VQISTTS 915


>TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreurys
           tristis}, partial (8%)
          Length = 4117

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 18/81 (22%), Positives = 38/81 (46%)
 Frame = -1

Query: 173 EFKTQEITQAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESV 232
           E K +EI++A +      L+S    + +   Q  + +  +     P KTE+ S+ + ++ 
Sbjct: 718 ETKVEEISKAVNEPVRETLASKFEKDEEETIQNGVDNLEKERIEEPVKTEVESTKENDTT 539

Query: 233 ATDASISVPPESSPAEVSQVQ 253
                +   P+ +PA+ +Q Q
Sbjct: 538 TISKDL---PKETPAKPAQKQ 485


>TC76721 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum sativum},
           partial (46%)
          Length = 674

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 26/79 (32%), Positives = 36/79 (44%)
 Frame = +3

Query: 137 ISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEITQAPSVSTETELSSSVP 196
           + +   SS  LQV  +S   +Q    S PSL   I+   TQE  Q  S++T T L   V 
Sbjct: 189 LQVQITSSSSLQV*ISSTTSLQV*VTSSPSLQVQISTTTTQETIQV-SITTTTSLQI*VS 365

Query: 197 TESDVPTQTELSSSVQSES 215
             + + T T L   V S +
Sbjct: 366 PSTCLLTTTSLQV*VSSST 422


>BG449674 weakly similar to GP|8885520|dbj streptococcal hemagglutinin
           {Streptococcus gordonii}, partial (1%)
          Length = 651

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
 Frame = +3

Query: 136 LISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYIN----------EFKTQEITQA--P 183
           ++   A  SI   V   + P  + VE     L+  +           + KT  + +   P
Sbjct: 303 VVECEAEPSIETVVESEAEPSTELVEGEAEVLNNVVQSEAKPSVDVADLKTNAVDREVEP 482

Query: 184 SVSTET--ELSSSVPTESDVPTQTELSSSVQSESIAPAKT--ELSSSIQTE 230
           SV TET  E  +SV  E+ + T  E   S+++     A+T  E  +SI+ E
Sbjct: 483 SVETETAVEAETSVEAETSIETSVEAEISIEAXPSVEAETLVEGXTSIEAE 635


>TC86473 similar to PIR|E84828|E84828 probable WD-40 repeat protein
           [imported] - Arabidopsis thaliana, partial (68%)
          Length = 2654

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 42  SESDCNDEECAPDKEVGKVSMEWLAEE 68
           +ESD +++E AP   +G+V ++W  +E
Sbjct: 398 AESDSSEDEVAPRNTIGEVPLKWYEDE 478


>BE324834 similar to GP|8132441|gb| extensin {Pisum sativum}, partial (44%)
          Length = 451

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 26/77 (33%), Positives = 37/77 (47%)
 Frame = +2

Query: 137 ISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEITQAPSVSTETELSSSVP 196
           + +   SS  LQV  +S   +Q    S  SL   I+   TQE  Q P ++T T L   VP
Sbjct: 41  LQVQITSSSSLQV*ISSTTSLQV*VTSSSSLQVQISTTTTQETIQVP-ITTTTRLQI*VP 217

Query: 197 TESDVPTQTELSSSVQS 213
           + + +  Q  +SSS  S
Sbjct: 218 SSTSL--QV*ISSSTCS 262


>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
           thaliana}, partial (39%)
          Length = 883

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 25/85 (29%), Positives = 39/85 (45%)
 Frame = -1

Query: 184 SVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISVPPE 243
           S S+ +  SSS P+ S   + +  SSS  S   AP    L+S   + S ++  S      
Sbjct: 553 SSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAP----LASGSSSGSPSSSPSSPE*SS 386

Query: 244 SSPAEVSQVQVESQIQTETSSVDIV 268
           SSP+  S     S   + +SSV ++
Sbjct: 385 SSPSSSSSCTSSSSSSSSSSSVSLL 311


>CA917294 similar to GP|6691680|dbj| Mga23 {Streptococcus pyogenes}, partial
           (3%)
          Length = 662

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 15/46 (32%), Positives = 26/46 (55%), Gaps = 2/46 (4%)
 Frame = +3

Query: 218 PAKTELSSSI--QTESVATDASISVPPESSPAEVSQVQVESQIQTE 261
           P K   SS I  Q +   TDA++    +S P++ + V+  SQ+Q++
Sbjct: 279 PTKRPRSSGIVIQVQHSYTDANVIAKKQSQPSQFTVVEATSQVQSQ 416


>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
           {Arabidopsis thaliana}, partial (50%)
          Length = 753

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -2

Query: 180 TQAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASIS 239
           + +PS  + +  SSS  + S  P      SS  S S + +  E SSS+ + S  T +S S
Sbjct: 506 SSSPSSLSSSSSSSSSSSSSLPPAPFGTGSSSGSASSSSSSPEKSSSLSSSSSFTSSSSS 327

Query: 240 VPPESS 245
               SS
Sbjct: 326 SSSSSS 309


>TC89827 similar to GP|22654962|gb|AAM98074.1 AT5g60420/muf9_70 {Arabidopsis
           thaliana}, partial (46%)
          Length = 1378

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 14/47 (29%), Positives = 25/47 (52%)
 Frame = +3

Query: 14  CAFSTRKFSLKQQKINKRSSCMFIVRASSESDCNDEECAPDKEVGKV 60
           CA S R F   ++  ++RS  +  +R +S  +   EEC  ++  GK+
Sbjct: 210 CADSVRTFKTGKEAGSRRSDIIHSLR*ASFQNMGQEECCWERAGGKI 350


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.303    0.118    0.308 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,605,740
Number of Sequences: 36976
Number of extensions: 79737
Number of successful extensions: 427
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of query: 269
length of database: 9,014,727
effective HSP length: 95
effective length of query: 174
effective length of database: 5,502,007
effective search space: 957349218
effective search space used: 957349218
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 57 (26.6 bits)


Medicago: description of AC135566.8