Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135565.15 + phase: 0 
         (557 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC83064 similar to GP|14423452|gb|AAK62408.1 Unknown protein {Ar...   150  1e-36
TC81121 homologue to GP|18182311|gb|AAL65125.1 GT-2 factor {Glyc...    84  1e-16
BE997694 similar to GP|13646986|db DNA-binding protein DF1 {Pisu...    80  2e-15
AW584509 homologue to GP|13646986|db DNA-binding protein DF1 {Pi...    80  2e-15
BF646615 homologue to PIR|T48395|T483 GT2-like protein - Arabido...    75  9e-14
TC93592 weakly similar to GP|13646986|dbj|BAB41080. DNA-binding ...    64  1e-10
CB066689 homologue to GP|13646986|dbj DNA-binding protein DF1 {P...    62  4e-10
TC81623 similar to PIR|T01257|T01257 probable GT-1-like transcri...    59  5e-09
BG648313 similar to GP|9279604|dbj DNA-binding protein GT-1 {Ara...    52  5e-07
TC78925 similar to GP|17529158|gb|AAL38805.1 unknown protein {Ar...    39  0.007
TC91315 weakly similar to GP|8777369|dbj|BAA96959.1 gene_id:MJE7...    39  0.007
TC82818 similar to GP|20259203|gb|AAM14317.1 unknown protein {Ar...    37  0.026
BG452862 weakly similar to GP|14715258|emb N3 like protein {Medi...    36  0.044
TC85955 similar to GP|3860319|emb|CAA10127.1 nucleolar protein {...    36  0.044
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {...    36  0.044
TC90246 similar to PIR|T00872|T00872 probable protein kinase At2...    36  0.044
TC93671 weakly similar to PIR|F84595|F84595 hypothetical protein...    36  0.044
TC88376 similar to GP|8778315|gb|AAF79324.1| F14J16.29 {Arabidop...    35  0.099
TC93118 homologue to GP|14587596|gb|AAK70588.1 NADH dehydrogenas...    35  0.099
TC89755 similar to GP|10177798|dbj|BAB11289. emb|CAB87778.1~gene...    34  0.13

>TC83064 similar to GP|14423452|gb|AAK62408.1 Unknown protein {Arabidopsis
           thaliana}, partial (12%)
          Length = 571

 Score =  150 bits (379), Expect = 1e-36
 Identities = 81/133 (60%), Positives = 96/133 (71%), Gaps = 8/133 (6%)
 Frame = +1

Query: 385 PSSSTTLVAQPRNNNPISSYSLISSGERDDIGRRWPKDEVLALINLRC-----NNNNEEK 439
           PSSS T       +N  S+  + +  E+ +  RRWP+DEVLALINL+      N +N   
Sbjct: 37  PSSSDT-----EYSNSTSTLVVPTIMEKLEDRRRWPRDEVLALINLKSTTSVINRSNNNV 201

Query: 440 EGNSNNKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDA---NRKRSLDSRT 496
           EGNSN K PLWERIS+GM ELGYKRSAKRCKEKWENINKYF+KTKD     +KRS+DSRT
Sbjct: 202 EGNSN-KGPLWERISEGMFELGYKRSAKRCKEKWENINKYFKKTKDIVVNKKKRSMDSRT 378

Query: 497 CPYFHLLTNLYNQ 509
           CPYFH L++LYNQ
Sbjct: 379 CPYFHQLSSLYNQ 417



 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 11/66 (16%)
 Frame = +1

Query: 104 WTNDEVLALLKIRSSME-----------SWFPDFTWEHVSRKLAEVGYKRSAEKCKEKFE 152
           W  DEVLAL+ ++S+             +      WE +S  + E+GYKRSA++CKEK+E
Sbjct: 124 WPRDEVLALINLKSTTSVINRSNNNVEGNSNKGPLWERISEGMFELGYKRSAKRCKEKWE 303

Query: 153 EESRFF 158
             +++F
Sbjct: 304 NINKYF 321


>TC81121 homologue to GP|18182311|gb|AAL65125.1 GT-2 factor {Glycine max},
           partial (37%)
          Length = 794

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 44/119 (36%), Positives = 70/119 (57%)
 Frame = +3

Query: 416 GRRWPKDEVLALINLRCNNNNEEKEGNSNNKAPLWERISQGMLELGYKRSAKRCKEKWEN 475
           G RWP+ E LAL+ +R + +   ++  S+ K PLWE +S+ + +LGY RS+K+CKEK+EN
Sbjct: 288 GNRWPRQETLALLKIRSDMDGVFRD--SSLKGPLWEEVSRKLADLGYHRSSKKCKEKFEN 461

Query: 476 INKYFRKTKDANRKRSLDSRTCPYFHLLTNLYNQGKLVLQSDQKQESNNVNVPEENVVQ 534
           + KY ++TK+    +S + +T  +F  L  L  Q  L   S   +   N N P  N ++
Sbjct: 462 VYKYHKRTKEGRSGKS-EGKTYRFFDQLQALEKQ--LTFSSYHPKPQTNNNTPTTNPIE 629



 Score = 71.6 bits (174), Expect = 7e-13
 Identities = 38/83 (45%), Positives = 51/83 (60%), Gaps = 7/83 (8%)
 Frame = +3

Query: 104 WTNDEVLALLKIRSSMESWFPDFT-----WEHVSRKLAEVGYKRSAEKCKEKFEEESRFF 158
           W   E LALLKIRS M+  F D +     WE VSRKLA++GY RS++KCKEKFE   ++ 
Sbjct: 297 WPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLADLGYHRSSKKCKEKFENVYKYH 476

Query: 159 NNINHNQN--SFGKNFRFVTELE 179
                 ++  S GK +RF  +L+
Sbjct: 477 KRTKEGRSGKSEGKTYRFFDQLQ 545


>BE997694 similar to GP|13646986|db DNA-binding protein DF1 {Pisum sativum},
           partial (19%)
          Length = 609

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
 Frame = +3

Query: 251 FKGFCESVVKKMMDQQEEMHNKLIEDMVKRDEEKFSREEAWKKQEMEKMNKELELMAHEQ 310
           +K F E ++K+++++QEE+H + +E + KR+ E+ +REEAW+ QEM+++N+E E++A E+
Sbjct: 9   WKDFFERLMKEVVEKQEELHKRFLEAIEKRERERGAREEAWRLQEMQRINREREILAQER 188

Query: 311 AIAGDRQAHIIQFLNKFSTSANSSSL--------TSMSTQLQAYLATLTSNSSSSTLHSQ 362
           ++A  + A ++ FL K +      +L        T +  Q QA   T+ + +   T  + 
Sbjct: 189 SLAATKDAAVMAFLQKIAEQQEQQNLVPPVLNNSTIVPQQQQAPQETIPTPTPKPT-PTP 365

Query: 363 NPNPETLKKTLQPIP 377
            P P  L     P+P
Sbjct: 366 TPTPVPLPAAAAPLP 410


>AW584509 homologue to GP|13646986|db DNA-binding protein DF1 {Pisum
           sativum}, partial (22%)
          Length = 694

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 38/93 (40%), Positives = 61/93 (64%)
 Frame = +2

Query: 416 GRRWPKDEVLALINLRCNNNNEEKEGNSNNKAPLWERISQGMLELGYKRSAKRCKEKWEN 475
           G RWP+ E LAL+ +R + +   K+ +   K PLW+ +S+ M +LGY+R++K+CKEK+EN
Sbjct: 188 GNRWPRQETLALLKIRSDMDGAFKDASV--KGPLWDEVSRKMADLGYQRNSKKCKEKFEN 361

Query: 476 INKYFRKTKDANRKRSLDSRTCPYFHLLTNLYN 508
           + KY ++TK+    +S D +T  +F  L  L N
Sbjct: 362 VYKYHKRTKEGRGGKS-DGKTYRFFDQLQALEN 457



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 44/126 (34%), Positives = 66/126 (51%), Gaps = 7/126 (5%)
 Frame = +2

Query: 75  DKEQNSTPSMNNFQIDRDQRQILPQLIDPWTNDEVLALLKIRSSMESWFPDFT-----WE 129
           D E+    S N   +DR          + W   E LALLKIRS M+  F D +     W+
Sbjct: 128 DDERGGGSSRNEEGVDRSFGG------NRWPRQETLALLKIRSDMDGAFKDASVKGPLWD 289

Query: 130 HVSRKLAEVGYKRSAEKCKEKFEEESRFFNNINHNQ--NSFGKNFRFVTELEEVYQGGGG 187
            VSRK+A++GY+R+++KCKEKFE   ++       +   S GK +RF  +L+ +      
Sbjct: 290 EVSRKMADLGYQRNSKKCKEKFENVYKYHKRTKEGRGGKSDGKTYRFFDQLQAL------ 451

Query: 188 ENNKNL 193
           ENN ++
Sbjct: 452 ENNPSM 469


>BF646615 homologue to PIR|T48395|T483 GT2-like protein - Arabidopsis
           thaliana, partial (16%)
          Length = 654

 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
 Frame = +1

Query: 377 PENPSSTLPSSSTTLVAQPRNNNPISSYSLISSGERDDIGRRWPKDEVLALINLRCNNNN 436
           P   ++  P+++TT  + P  +  + + +          GR WP+ E L L+ +R   + 
Sbjct: 226 PAVATTATPTNTTTSASTPSFSGNLEAETTAFIAVDASTGR-WPRQETLTLLEIRSRLDP 402

Query: 437 EEKEGNSNNKAPLWERISQGMLEL-GYKRSAKRCKEKWENINKYFRKTKDANRKRSLDSR 495
           + KE  +  K PLW+++S+ M E  GY+RS K+C+EK+EN+ KY++KTK+    R  D +
Sbjct: 403 QFKE--ATQKGPLWDQLSRIMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQ-DGK 573

Query: 496 TCPYFHLLTNLYNQ 509
              +F  L  LY +
Sbjct: 574 HYRFFRQLEALYGE 615



 Score = 65.5 bits (158), Expect = 5e-11
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 24/196 (12%)
 Frame = +1

Query: 29  PLSTPNNTFPPFDPYNQQNHPSQHHQLPL------QVQPNLLHPL----HPHKDDEDKEQ 78
           P ST NN FP  + +   N   QH+++ +       + P  LH       P         
Sbjct: 79  PRSTTNN-FPTAELFPAGNPHQQHYEMMMFGRQVADIIPRCLHDFVSTDSPAVATTATPT 255

Query: 79  N-----STPSMN-NFQIDRDQRQILPQLIDPWTNDEVLALLKIRSSMESWFPDFT----- 127
           N     STPS + N + +      +      W   E L LL+IRS ++  F + T     
Sbjct: 256 NTTTSASTPSFSGNLEAETTAFIAVDASTGRWPRQETLTLLEIRSRLDPQFKEATQKGPL 435

Query: 128 WEHVSRKLAEV-GYKRSAEKCKEKFEEESRFFNNINHNQ--NSFGKNFRFVTELEEVYQG 184
           W+ +SR + E  GY+RS +KC+EKFE   +++      +     GK++RF  +LE +Y  
Sbjct: 436 WDQLSRIMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALY-- 609

Query: 185 GGGENNKNLVEAEKQN 200
             GENN     +  QN
Sbjct: 610 --GENNNPSSSSLPQN 651


>TC93592 weakly similar to GP|13646986|dbj|BAB41080. DNA-binding protein DF1
           {Pisum sativum}, partial (11%)
          Length = 622

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 35/102 (34%), Positives = 60/102 (58%)
 Frame = +1

Query: 210 EEDSRMDDVLVSKKSEEEVVEKGTTNDEKKRKRSGDDRFEVFKGFCESVVKKMMDQQEEM 269
           E  S  DDV  S  S +E          +KR+R    + E    F  ++VKKM ++QE+M
Sbjct: 250 EPGSSSDDVGNSSASTKEF-------GSRKRRRKSSRKLE---DFAANLVKKMTEKQEQM 399

Query: 270 HNKLIEDMVKRDEEKFSREEAWKKQEMEKMNKELELMAHEQA 311
           H +++E + + ++E+  REEAWK++EME++ ++ E  A E++
Sbjct: 400 HKEMVEMIERMEKERIKREEAWKREEMERIKQDEEARAAERS 525


>CB066689 homologue to GP|13646986|dbj DNA-binding protein DF1 {Pisum
           sativum}, partial (8%)
          Length = 508

 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 25/38 (65%), Positives = 31/38 (80%)
 Frame = +3

Query: 472 KWENINKYFRKTKDANRKRSLDSRTCPYFHLLTNLYNQ 509
           KWENINKYF+K K++N+KR  DS+TCPYFH L  LY +
Sbjct: 3   KWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKE 116


>TC81623 similar to PIR|T01257|T01257 probable GT-1-like transcription
           factor [imported] - Arabidopsis thaliana, partial (47%)
          Length = 847

 Score = 58.9 bits (141), Expect = 5e-09
 Identities = 59/259 (22%), Positives = 105/259 (39%), Gaps = 18/259 (6%)
 Frame = +1

Query: 44  NQQNHPSQHHQLPLQVQPNLLHPLHPHKDDEDKEQN--STPSMNNFQIDRDQRQILPQLI 101
           + + H  QHHQ     Q    H  H  +  +    N   T S+N    DR      PQ  
Sbjct: 136 SMEGHHLQHHQQHQHQQHQQHHQQHQQRQHQQHAHNIIGTSSVNVDVTDR-----FPQ-- 294

Query: 102 DPWTNDEVLALLKIRSSMESWFPDFT-----WEHVSRKLAEVGYKRSAEKCKEKFEE-ES 155
             W+  E    L IRS ++  F +       WE +S  + E GY RSAE+CK K++   +
Sbjct: 295 --WSIQETKEFLMIRSELDQTFMETKRNKQLWEVISNTMKEKGYHRSAEQCKCKWKNLVT 468

Query: 156 RFFNNINHNQNSFGKNFRFVTELEEVY----------QGGGGENNKNLVEAEKQNEVQDK 205
           R+         +  + F F  EL+ ++          +  GG   K +      +E +++
Sbjct: 469 RYKGCETMEVEAMRQQFPFYNELQAIFSARMQRMLWAEAEGGSKKKGV---HVSSEDEEE 639

Query: 206 MDPHEEDSRMDDVLVSKKSEEEVVEKGTTNDEKKRKRSGDDRFEVFKGFCESVVKKMMDQ 265
           +   E +      +  KK + +++  G  ND      +G +         + ++++ M Q
Sbjct: 640 LGNEESEGDHKGNIKKKKKKGKMIIGGGGND-----NNGSNNL-------KEILEEFMRQ 783

Query: 266 QEEMHNKLIEDMVKRDEEK 284
           Q +M  + +E    R+ E+
Sbjct: 784 QMQMEAQWMEAFEARENER 840



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
 Frame = +1

Query: 418 RWPKDEVLALINLRCNNNNEEKEGNSNNKAPLWERISQGMLELGYKRSAKRCKEKWENIN 477
           +W   E    + +R   +    E   N +  LWE IS  M E GY RSA++CK KW+N+ 
Sbjct: 292 QWSIQETKEFLMIRSELDQTFMETKRNKQ--LWEVISNTMKEKGYHRSAEQCKCKWKNLV 465

Query: 478 KYFR--KTKDANRKRSLDSRTCPYFHLLTNLYN---QGKLVLQSDQKQESNNVNVPEENV 532
             ++  +T +    R    +  P+++ L  +++   Q  L  +++   +   V+V  E+ 
Sbjct: 466 TRYKGCETMEVEAMR----QQFPFYNELQAIFSARMQRMLWAEAEGGSKKKGVHVSSED- 630

Query: 533 VQEKAKQDENQ 543
            +E+   +E++
Sbjct: 631 -EEELGNEESE 660


>BG648313 similar to GP|9279604|dbj DNA-binding protein GT-1 {Arabidopsis
           thaliana}, partial (53%)
          Length = 815

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 28/70 (40%), Positives = 38/70 (54%)
 Frame = +1

Query: 419 WPKDEVLALINLRCNNNNEEKEGNSNNKAPLWERISQGMLELGYKRSAKRCKEKWENINK 478
           W +DE  +LI LR   ++      SN    LWE+IS  M E G+ RS   C +KW N+ K
Sbjct: 160 WVQDETRSLIGLRREMDSLFNTSKSNKH--LWEQISAKMREKGFDRSPTMCTDKWRNLLK 333

Query: 479 YFRKTKDANR 488
            F+K K  +R
Sbjct: 334 EFKKAKHHDR 363



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
 Frame = +1

Query: 49  PSQHHQLPLQVQPNLLHPLHPHKDDEDKEQNSTPSMNNFQIDRDQRQILPQLIDPWTNDE 108
           PSQHH    Q QP ++       DD + E  +                  +  + W  DE
Sbjct: 43  PSQHHHHLQQQQPQMILTAESSGDDPEMEIKAP----------------KKRAETWVQDE 174

Query: 109 VLALLKIRSSMESWF-----PDFTWEHVSRKLAEVGYKRSAEKCKEKFEEESRFFNNINH 163
             +L+ +R  M+S F         WE +S K+ E G+ RS   C +K+    + F    H
Sbjct: 175 TRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKH 354

Query: 164 NQNSFG 169
           +    G
Sbjct: 355 HDRGGG 372


>TC78925 similar to GP|17529158|gb|AAL38805.1 unknown protein {Arabidopsis
           thaliana}, partial (37%)
          Length = 1274

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = +1

Query: 418 RWPKDEVLALINLRCNNNNEEKEGNSNN----KAPLWERISQGMLELGYKRSAKRCKEKW 473
           RW + E+L LI  + +  +  K G + +      P W  +S    + G  R   +C+++W
Sbjct: 211 RWTRQEILVLIQGKSDAESRFKPGRNGSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRW 390

Query: 474 ENINKYFRKTKD 485
            N+   ++K K+
Sbjct: 391 SNLAGDYKKIKE 426


>TC91315 weakly similar to GP|8777369|dbj|BAA96959.1
           gene_id:MJE7.2~pir||C71412~similar to unknown protein
           {Arabidopsis thaliana}, partial (3%)
          Length = 1044

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 17/58 (29%), Positives = 33/58 (56%)
 Frame = +2

Query: 434 NNNEEKEGNSNNKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDANRKRS 491
           N  + ++ N NNK  + E+++Q  LEL  ++ A   K +W+ I ++F   + A  K++
Sbjct: 113 NMGDVEQSNENNKESMIEQLAQAFLELEAQKGASEDKVQWDEIKQHFSDLEMALNKKN 286


>TC82818 similar to GP|20259203|gb|AAM14317.1 unknown protein {Arabidopsis
           thaliana}, partial (43%)
          Length = 1176

 Score = 36.6 bits (83), Expect = 0.026
 Identities = 13/36 (36%), Positives = 26/36 (72%)
 Frame = +1

Query: 450 WERISQGMLELGYKRSAKRCKEKWENINKYFRKTKD 485
           W+ IS+ M E GY+ S ++C++K+ ++NK +++  D
Sbjct: 7   WKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLND 114



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 11/35 (31%), Positives = 25/35 (71%)
 Frame = +1

Query: 128 WEHVSRKLAEVGYKRSAEKCKEKFEEESRFFNNIN 162
           W+ +S+ +AE GY+ S ++C++KF + ++ +  +N
Sbjct: 7   WKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLN 111


>BG452862 weakly similar to GP|14715258|emb N3 like protein {Medicago
           truncatula}, partial (33%)
          Length = 658

 Score = 35.8 bits (81), Expect = 0.044
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
 Frame = +3

Query: 202 VQDKMDPHEEDSRMDDVLVSKKSEEEVVEKGTTNDEKKRKRSGDDRFEVFKGFCESVVKK 261
           + +K+  H+ D      +V K+ E  VV   TTNDEKK + S  D           +V+K
Sbjct: 363 IDEKLPEHKGD------IVDKEIENVVVPSKTTNDEKKLEVSVVDMV---------IVEK 497

Query: 262 MMDQQEEMHN--KLIEDMVKRDEEKFSRE 288
             ++Q+E H+  +  +D V +D+ K   E
Sbjct: 498 KEEKQDEEHDEKEKKQDQVTQDKTKVKNE 584


>TC85955 similar to GP|3860319|emb|CAA10127.1 nucleolar protein {Cicer
            arietinum}, partial (98%)
          Length = 1981

 Score = 35.8 bits (81), Expect = 0.044
 Identities = 36/158 (22%), Positives = 63/158 (39%)
 Frame = +2

Query: 136  AEVGYKRSAEKCKEKFEEESRFFNNINHNQNSFGKNFRFVTELEEVYQGGGGENNKNLVE 195
            +E G     EK +E+ EE   F++     +    KN   +    E       E     V 
Sbjct: 1250 SEKGTSAFGEKLREQVEERLDFYDKGVAPR----KNIDVMKSAIESVDNKDTEMETEEVS 1417

Query: 196  AEKQNEVQDKMDPHEEDSRMDDVLVSKKSEEEVVEKGTTNDEKKRKRSGDDRFEVFKGFC 255
            A+K  + + K       +  DD+ V K +E   +  G   D K  K+             
Sbjct: 1418 AKKTKKKKQKA------ADGDDMAVDKAAE---ITNGDAEDHKSEKKK------------ 1534

Query: 256  ESVVKKMMDQQEEMHNKLIEDMVKRDEEKFSREEAWKK 293
            +   K+ +DQ+ E+ +K++ED    D  K  ++++ KK
Sbjct: 1535 KKKEKRKLDQEVEVEDKVVEDGANADSSKKKKKKSKKK 1648


>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
           thaliana}, partial (39%)
          Length = 883

 Score = 35.8 bits (81), Expect = 0.044
 Identities = 33/129 (25%), Positives = 60/129 (45%), Gaps = 17/129 (13%)
 Frame = -1

Query: 318 AHIIQFLNKFSTSANSSSLTSMSTQLQAYLATLTSNSSSSTLHSQNPNP-----ETLKKT 372
           +H + F   +  S++SSS +S S+   +  ++ + +SSSS+  S  P P      +   +
Sbjct: 595 SHFLFFAGGWGVSSSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPS 416

Query: 373 LQPIPENPSSTLPSSSTTLVAQPRNNNPISSYSLI------------SSGERDDIGRRWP 420
             P     SS+ PSSS++  +   +++  SS SL+            S G  + I   + 
Sbjct: 415 SSPSSPE*SSSSPSSSSSCTSSSSSSSSSSSVSLLFSL*AGFLPRRCSKGNLESIAVNFG 236

Query: 421 KDEVLALIN 429
             E+ ALI+
Sbjct: 235 ATELAALIS 209


>TC90246 similar to PIR|T00872|T00872 probable protein kinase At2g45590
           [imported] - Arabidopsis thaliana, partial (28%)
          Length = 1451

 Score = 35.8 bits (81), Expect = 0.044
 Identities = 25/92 (27%), Positives = 43/92 (46%)
 Frame = +2

Query: 211 EDSRMDDVLVSKKSEEEVVEKGTTNDEKKRKRSGDDRFEVFKGFCESVVKKMMDQQEEMH 270
           +D  MD +    KSE+  +E G   +EKK+++    + E ++   E +V  MM       
Sbjct: 194 KDYVMDWIGREVKSEKSELEGGKIGNEKKKEKKRKQKLEWWESMDEEIVGGMM------- 352

Query: 271 NKLIEDMVKRDEEKFSREEAWKKQEMEKMNKE 302
                    R E++ S  E WK++  E++ KE
Sbjct: 353 ---------RKEKRKSVREWWKEEHCEEVAKE 421



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 24/71 (33%), Positives = 36/71 (49%), Gaps = 1/71 (1%)
 Frame = -1

Query: 319 HIIQFLNKFSTSANS-SSLTSMSTQLQAYLATLTSNSSSSTLHSQNPNPETLKKTLQPIP 377
           H   FL+ FS S +S S L  +     + + + T +S SS+ H Q P P     ++  IP
Sbjct: 470 HHHHFLHLFSFSYSSFSPLQPLHNAPPSTIPSPTFSSLSSSSHQQFPRP-----SIPTIP 306

Query: 378 ENPSSTLPSSS 388
            + SS+ P SS
Sbjct: 305 ISASSSSPFSS 273


>TC93671 weakly similar to PIR|F84595|F84595 hypothetical protein At2g20980
           [imported] - Arabidopsis thaliana, partial (42%)
          Length = 938

 Score = 35.8 bits (81), Expect = 0.044
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 364 PNPETLKKTLQPIPENPSSTLPSSSTTLV-AQPRNNNPISS 403
           PNP TL  TL P+P NPS T+P+ + +LV A P N  P+ S
Sbjct: 189 PNPLTLTLTLNPLP-NPSPTIPNLTNSLVFALPTNV*PLLS 308


>TC88376 similar to GP|8778315|gb|AAF79324.1| F14J16.29 {Arabidopsis
           thaliana}, partial (25%)
          Length = 706

 Score = 34.7 bits (78), Expect = 0.099
 Identities = 19/66 (28%), Positives = 33/66 (49%)
 Frame = +1

Query: 335 SLTSMSTQLQAYLATLTSNSSSSTLHSQNPNPETLKKTLQPIPENPSSTLPSSSTTLVAQ 394
           +L++MS + +  L T T  +  +     NP   ++  TL P+P  P++  P  S   + Q
Sbjct: 94  ALSNMSLEARNLLQTTTQPNLPNIPTLPNPTLPSIPTTLPPLPSIPTTLPPLPSMPTLPQ 273

Query: 395 PRNNNP 400
           P+ N P
Sbjct: 274 PQGNVP 291


>TC93118 homologue to GP|14587596|gb|AAK70588.1 NADH dehydrogenase subunit 3
           {Microcebus rufus}, partial (10%)
          Length = 567

 Score = 34.7 bits (78), Expect = 0.099
 Identities = 23/68 (33%), Positives = 34/68 (49%), Gaps = 1/68 (1%)
 Frame = +3

Query: 332 NSSSLTSMSTQLQAYLATLTSNSSSSTLHSQNPNPETLKKTLQPIPENPSSTLPSSSTTL 391
           N  S  S  +Q  +Y+A+LT N + +  H+QNP    +        ENP+ TL  + + L
Sbjct: 135 NGDSPLSPRSQWFSYIASLTQNQNQNNNHNQNPFMSQI--------ENPNQTLEQAFSRL 290

Query: 392 -VAQPRNN 398
            VA P  N
Sbjct: 291 SVANPNPN 314


>TC89755 similar to GP|10177798|dbj|BAB11289.
           emb|CAB87778.1~gene_id:MXA21.9~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (59%)
          Length = 864

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
 Frame = +1

Query: 327 FSTSANSSSLTSMSTQLQAYLAT-------LTSNSSSSTLHSQNPNPETLKK 371
           FS+S++SSS  S S  LQ  ++T       +++N+S +T HS NPN +   +
Sbjct: 16  FSSSSSSSSSYSYSYSLQNQISTKKKTHRIISTNTSRATFHSPNPNQKNFTR 171


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.309    0.127    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,474,819
Number of Sequences: 36976
Number of extensions: 283532
Number of successful extensions: 2758
Number of sequences better than 10.0: 153
Number of HSP's better than 10.0 without gapping: 2544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2680
length of query: 557
length of database: 9,014,727
effective HSP length: 101
effective length of query: 456
effective length of database: 5,280,151
effective search space: 2407748856
effective search space used: 2407748856
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)


Medicago: description of AC135565.15