TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135565.1 - phase: 0 
         (150 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC85919 similar to GP|3204108|emb|CAA07230.1 putative deoxycytid...   126  4e-30
TC87887 homologue to GP|3204108|emb|CAA07230.1 putative deoxycyt...   120  2e-28
AW127328 similar to GP|14532498|gb| AT5g28050/F15F15_120 {Arabid...    92  8e-20
AL373660 homologue to GP|14532498|gb| AT5g28050/F15F15_120 {Arab...    51  2e-07
TC81690 similar to PIR|G96711|G96711 unknown protein  92941-8866...    47  2e-06
BE203045 similar to PIR|C96767|C9 unknown protein F2P9.17 [impor...    28  1.1
BQ158031 similar to GP|10441918|gb| unknown {Homo sapiens}, part...    27  2.4
TC82857 similar to PIR|T52076|T52076 ABI3-interacting protein ai...    27  2.4
TC85848 weakly similar to PIR|F90566|F90566 conserved hypothetic...    27  2.4
AW257530 similar to GP|20975622|emb putative ripening related pr...    27  3.1
TC83424 similar to GP|22653441|gb|AAN04061.1 Orf248 {Amoebidium ...    27  3.1
AL367110 weakly similar to PIR|JC4786|JC47 dnaK-type molecular c...    27  4.1
BQ137234 similar to EGAD|35719|3709 hypothetical protein {Burkho...    27  4.1
TC78933 similar to GP|17473880|gb|AAL38360.1 putative protein {A...    26  5.3
TC86589 similar to GP|7576200|emb|CAB87861.1 protein synthesis i...    26  5.3
BQ144095 weakly similar to GP|12842949|dbj| data source:SPTR  so...    26  7.0
CB894439 homologue to GP|13539160|emb soluble guanylate cyclase ...    26  7.0
BG452824                                                               26  7.0
BG645531                                                               25  9.1

>TC85919 similar to GP|3204108|emb|CAA07230.1 putative deoxycytidylate
           deaminase {Cicer arietinum}, partial (95%)
          Length = 858

 Score =  126 bits (316), Expect = 4e-30
 Identities = 71/149 (47%), Positives = 89/149 (59%), Gaps = 6/149 (4%)
 Frame = +3

Query: 1   MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
           M LRN +P+AHAE+ AIREACKKL ++ L+ CE+Y SCEPCPMCFGAIH S+VK      
Sbjct: 243 MVLRNTDPSAHAEVTAIREACKKLKQIELSECEIYASCEPCPMCFGAIHLSRVK------ 404

Query: 61  SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIG---KGTDFH- 116
                                        R+VYGA AEAA +IGF ++I    +GT F+ 
Sbjct: 405 -----------------------------RLVYGAKAEAAIAIGFDDFIADALRGTGFYQ 497

Query: 117 --KFEIKKIDGIAAEIAEEVFEKTKDKVK 143
             + EIK+ DG  A IAEEVFEKTK+K +
Sbjct: 498 KAQLEIKRADGNEAIIAEEVFEKTKEKFR 584


>TC87887 homologue to GP|3204108|emb|CAA07230.1 putative deoxycytidylate
           deaminase {Cicer arietinum}, partial (97%)
          Length = 952

 Score =  120 bits (302), Expect = 2e-28
 Identities = 69/147 (46%), Positives = 85/147 (56%), Gaps = 6/147 (4%)
 Frame = +1

Query: 1   MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
           M L   +PTAHAE+ AIREACKKL ++ L+ CE+Y SCEPCPMCFGAIH S++K      
Sbjct: 334 MVLNFTDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIK------ 495

Query: 61  SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIG---KGTDFHK 117
                                        R+VYGA AEAA +IGF ++I    +GT F++
Sbjct: 496 -----------------------------RLVYGAKAEAAIAIGFDDFIADALRGTGFYQ 588

Query: 118 ---FEIKKIDGIAAEIAEEVFEKTKDK 141
               EIK+ DG  A IAEEVFEKTK K
Sbjct: 589 KATLEIKRADGNEAVIAEEVFEKTKAK 669


>AW127328 similar to GP|14532498|gb| AT5g28050/F15F15_120 {Arabidopsis
           thaliana}, partial (30%)
          Length = 370

 Score = 92.0 bits (227), Expect = 8e-20
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = +2

Query: 1   MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIH 49
           M LRNK+PTAHAEI AIREAC+ LD++SLA CELY SCEPCPMCFGAIH
Sbjct: 224 MVLRNKDPTAHAEITAIREACQTLDRISLADCELYASCEPCPMCFGAIH 370


>AL373660 homologue to GP|14532498|gb| AT5g28050/F15F15_120 {Arabidopsis
          thaliana}, partial (12%)
          Length = 433

 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 19/23 (82%), Positives = 21/23 (90%)
 Frame = +2

Query: 32 CELYTSCEPCPMCFGAIHFSKVK 54
          CE+Y SCEPCPMCFGAIH S+VK
Sbjct: 5  CEIYASCEPCPMCFGAIHLSRVK 73


>TC81690 similar to PIR|G96711|G96711 unknown protein  92941-88668 [imported]
            - Arabidopsis thaliana, partial (15%)
          Length = 1659

 Score = 47.4 bits (111), Expect = 2e-06
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +3

Query: 7    EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAI 48
            + TAHAE++ IREA K L+   L+   LY + EPC MC GAI
Sbjct: 1068 DSTAHAEMVCIREASKHLNSWRLSETTLYVTLEPCAMCAGAI 1193


>BE203045 similar to PIR|C96767|C9 unknown protein F2P9.17 [imported] -
           Arabidopsis thaliana, partial (13%)
          Length = 531

 Score = 28.5 bits (62), Expect = 1.1
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +2

Query: 43  MCFGAIHFSKVKASM----RRLSFCLHNYTFLQSVLNYI 77
           MCFG +H+S   AS+    R  S+C H+ + L    N I
Sbjct: 383 MCFGLLHWSNQLASLSLGNRVFSYCHHSSSALTGFYNLI 499


>BQ158031 similar to GP|10441918|gb| unknown {Homo sapiens}, partial (3%)
          Length = 725

 Score = 27.3 bits (59), Expect = 2.4
 Identities = 10/22 (45%), Positives = 15/22 (67%)
 Frame = +3

Query: 63  CLHNYTFLQSVLNYIDITYLSY 84
           CLH  ++L  V+ Y++ TYL Y
Sbjct: 315 CLHKLSYLSCVIFYLEETYLVY 380


>TC82857 similar to PIR|T52076|T52076 ABI3-interacting protein aip1
           [imported] - Arabidopsis thaliana, partial (11%)
          Length = 818

 Score = 27.3 bits (59), Expect = 2.4
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +2

Query: 28  SLAGCELYTSCEPCPM 43
           SL G  LYTSC  CPM
Sbjct: 602 SLEGIPLYTSCRRCPM 649


>TC85848 weakly similar to PIR|F90566|F90566 conserved hypothetical protein
           MYPU_4380 [imported] - Mycoplasma pulmonis (strain UAB
           CTIP), partial (5%)
          Length = 823

 Score = 27.3 bits (59), Expect = 2.4
 Identities = 10/22 (45%), Positives = 15/22 (67%)
 Frame = +2

Query: 63  CLHNYTFLQSVLNYIDITYLSY 84
           CLH  ++L  V+ Y++ TYL Y
Sbjct: 713 CLHKLSYLSCVIFYLEETYLVY 778


>AW257530 similar to GP|20975622|emb putative ripening related protein {Cicer
           arietinum}, partial (37%)
          Length = 722

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 62  FCLHNYTFLQSVLNYIDITYLS 83
           F L+NYT L  +LN++ IT +S
Sbjct: 543 FKLYNYTILILILNFVQITNIS 608


>TC83424 similar to GP|22653441|gb|AAN04061.1 Orf248 {Amoebidium
           parasiticum}, partial (8%)
          Length = 454

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 61  SFCLHNYTFLQSVLNYIDITYLSYI 85
           +FCL N+  L S++N  +++YLS+I
Sbjct: 147 TFCLLNFISLLSLINPKNLSYLSFI 221


>AL367110 weakly similar to PIR|JC4786|JC47 dnaK-type molecular chaperone
           hsc70-3 - tomato, partial (6%)
          Length = 351

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 11/36 (30%), Positives = 18/36 (49%)
 Frame = -3

Query: 36  TSCEPCPMCFGAIHFSKVKASMRRLSFCLHNYTFLQ 71
           T+C PCP  F       +K +++  S+ + N   LQ
Sbjct: 289 TACTPCPSSFIIFITXWIKHTLKECSYNIQNLVVLQ 182


>BQ137234 similar to EGAD|35719|3709 hypothetical protein {Burkholderia
           cepacia}, partial (6%)
          Length = 1184

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 32  CELYTSCEPCPMCFGAIHFSKVKASMRRLSFCL 64
           C L + C  CP C G    S+ +++ RRL F L
Sbjct: 722 CLLASRCVGCPSCLGV---SRPRSAARRLVFSL 633


>TC78933 similar to GP|17473880|gb|AAL38360.1 putative protein {Arabidopsis
           thaliana}, partial (14%)
          Length = 710

 Score = 26.2 bits (56), Expect = 5.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 102 SIGFSNYIGKGTDFHKFEIK 121
           S GFS   GKG+D +++ IK
Sbjct: 420 SFGFSEIFGKGSDEYRYSIK 479


>TC86589 similar to GP|7576200|emb|CAB87861.1 protein synthesis initiation
           factor-like {Arabidopsis thaliana}, partial (28%)
          Length = 2539

 Score = 26.2 bits (56), Expect = 5.3
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +3

Query: 109 IGKGTDFHKFEIKKIDGIAAEIAEEVFEKTKDKVKA 144
           +GK TD  + + +++ GI  ++  + FEK  ++VKA
Sbjct: 288 VGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKA 395


>BQ144095 weakly similar to GP|12842949|dbj| data source:SPTR  source
           key:Q9Y2Y1  evidence:ISS~homolog to PUTATIVE
           DNA-DIRECTED RNA POLYMERASE, partial (39%)
          Length = 615

 Score = 25.8 bits (55), Expect = 7.0
 Identities = 11/26 (42%), Positives = 19/26 (72%), Gaps = 3/26 (11%)
 Frame = +3

Query: 5   NKEPTAHAEIIAIRE---ACKKLDKV 27
           N++PT HA+I+AI +    C +LD++
Sbjct: 306 NQKPTYHAQIVAILKLVITCNRLDQL 383


>CB894439 homologue to GP|13539160|emb soluble guanylate cyclase
           {Caenorhabditis elegans}, partial (1%)
          Length = 649

 Score = 25.8 bits (55), Expect = 7.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 114 DFHKFEIKKIDGIAAEIAEEVFEKTKDKVKANL 146
           DF K E+KK   + + +   VFE++ ++ K++L
Sbjct: 513 DFFKLEVKK*VFLISILGRSVFERSMERKKSSL 415


>BG452824 
          Length = 665

 Score = 25.8 bits (55), Expect = 7.0
 Identities = 16/46 (34%), Positives = 20/46 (42%)
 Frame = -2

Query: 6   KEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFS 51
           K PTA +        C  LD    A C L +S  PCP+ F    F+
Sbjct: 193 KLPTAESLCSPATSLCCSLD----AWCSLASSSFPCPVIFSLTLFA 68


>BG645531 
          Length = 790

 Score = 25.4 bits (54), Expect = 9.1
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 27 VSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRLSFCLHNYTFL 70
          +S A C ++   +   +  G   FS   A+MRR+S+   N TFL
Sbjct: 52 ISYADCLVHGDSQTNMLLNGCNIFSYTDANMRRISYENINETFL 183


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.324    0.137    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,697,313
Number of Sequences: 36976
Number of extensions: 66020
Number of successful extensions: 532
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of query: 150
length of database: 9,014,727
effective HSP length: 87
effective length of query: 63
effective length of database: 5,797,815
effective search space: 365262345
effective search space used: 365262345
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (25.4 bits)