Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135464.5 - phase: 0 /pseudo
         (1087 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CB893203                                                              155  3e-39
TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imp...   140  3e-33
BG447966 weakly similar to PIR|G96509|G96 protein F27F5.21 [impo...   125  7e-29
BG587108 similar to PIR|G96509|G9 protein F27F5.21 [imported] - ...    77  4e-24
BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgari...   107  2e-23
TC90516                                                               106  4e-23
BG586267 weakly similar to PIR|A84888|A8 hypothetical protein At...   102  8e-22
AW736247 weakly similar to PIR|T14619|T146 reverse transcriptase...    79  1e-14
TC81386 similar to GP|10140689|gb|AAG13524.1 putative non-LTR re...    75  1e-13
CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [i...    58  2e-08
AW686588                                                               57  5e-08
BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-li...    52  1e-06
TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non...    51  3e-06
TC93122                                                                40  7e-04
TC87722 similar to SP|O24496|GL2C_ARATH Hydroxyacylglutathione h...    32  1.3
TC92645                                                                30  6.6

>CB893203 
          Length = 800

 Score =  155 bits (392), Expect(2) = 3e-39
 Identities = 69/138 (50%), Positives = 92/138 (66%)
 Frame = -3

Query: 63  LSEEWCLQWPNSFQVALLRGLSDHCPLQLSVDEENWGPRPSRMLKCWQDLPGYNQFVKDK 122
           +SE WC++WPN  Q AL RGLSD CP+ L++DE NWGPR   MLKCW DLPGY+ FVKDK
Sbjct: 798 VSESWCIKWPNMIQRALFRGLSDRCPIMLTIDEGNWGPRLHHMLKCWADLPGYHLFVKDK 619

Query: 123 LKSFQIEGWGGFVLREKLKFIKTALKEWHIGHASNIPGKIDSLKKRQADFDDKGDVGDLS 182
             SFQ+  WGG+VL+EK K ++  LK+WH  H  N+  +I+ +++  A  D KG+   L 
Sbjct: 618 WNSFQVSRWGGYVLKEK*KMVRNNLKDWHHNHTRNLDARINDIRESIAYLDSKGEDLTLD 439

Query: 183 ADEILELRGITHDLHSLS 200
            +E+        DLH+LS
Sbjct: 438 TEEV-------DDLHTLS 406



 Score = 26.2 bits (56), Expect(2) = 3e-39
 Identities = 10/16 (62%), Positives = 15/16 (93%)
 Frame = -1

Query: 198 SLSRVNSSILWQQSRL 213
           SLS++N+SI WQ+SR+
Sbjct: 392 SLSKLNTSIQWQKSRI 345


>TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imported] -
           Arabidopsis thaliana, partial (6%)
          Length = 951

 Score =  140 bits (352), Expect = 3e-33
 Identities = 71/120 (59%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
 Frame = +2

Query: 338 RFISDFHRNGKLTRGINTTFIALISKIDSPQRINDFRPISLVGSLYKILSKVLANRLKLV 397
           RF+S+FHRN KL +GIN+TFIALI K+D+PQR+NDFRPISLVGSLYKIL K+LANRL++V
Sbjct: 5   RFVSEFHRNRKLFKGINSTFIALIPKVDNPQRLNDFRPISLVGSLYKILGKLLANRLRVV 184

Query: 398 LGKIISDSQTAFVKDRQILDGILI-ANEVVDEARKNKRN*CCSKLILRRLLTR*IGGTWI 456
           +G +ISD+Q+AFVK+RQIL+ + +    +    R  ++  CC + IL+RL+T  IG  WI
Sbjct: 185 IGSVISDAQSAFVKNRQILEMVFL*QMRLWMRLRN*RKIFCCLRWILKRLITLSIGLIWI 364



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 41/106 (38%), Positives = 53/106 (49%)
 Frame = +3

Query: 547 NSQMILFFLVLKVGQMCVPYVRFCLYLPRCLV*KLISTKVYW*VSILRIRGYMRRLLF*I 606
           N Q  L    LK+GQ  V      L+   CLV*+ I  +V W V I  + G +RRLLF*+
Sbjct: 555 NLQTTLCC*KLKIGQTSVL*GLHLLFFRLCLV*R*IFIRVAWFV*ISLLLG*VRRLLF*V 734

Query: 607 VRWVRFRLCIWAYRLVVILGG*LFGTLC*KQLNLDCWGGKVVSFLM 652
            +W R+  C        ILG *+FG L *    L    G VV +L+
Sbjct: 735 GKWARYHFCT*VCLSREILGA*VFGNLL*IA*KLG*LVGIVVFYLL 872


>BG447966 weakly similar to PIR|G96509|G96 protein F27F5.21 [imported] -
           Arabidopsis thaliana, partial (7%)
          Length = 687

 Score =  125 bits (315), Expect = 7e-29
 Identities = 80/227 (35%), Positives = 123/227 (53%), Gaps = 5/227 (2%)
 Frame = +2

Query: 214 LWLKDGDANSKYFHSVLSGRRRRNSIISLLADS-NLVEGVQPIRNAVLSHFRDHFAARHT 272
           +WLKDGD N+K+FHS  S RR+ N I  L  ++ N  +G + +   ++++F + F + + 
Sbjct: 2   VWLKDGDKNTKFFHSKASQRRKVNEIKKLKDETGNWCKGEENVERLLITYFNNLFTSSNP 181

Query: 273 SRVGIDNLPFKC-LSHTDGSGLTKPFSADEVKSAVWDCDSYKSPGPDGVNFGFIKEFWDE 331
           + +       K  LSH       K F+ +EV  A+      K+PGPDG+   F +++W  
Sbjct: 182 TAIEETCEVVKGKLSHEHIVWCEKEFTEEEVLEAINQMHPVKAPGPDGLPALFFQKYWHI 361

Query: 332 LKEDVMRFISDFHRNGKLTRGINTTFIALISKIDSPQRINDFRPISLVGSLYKILSKVLA 391
           + ++V + +     N   T  +N TFI LI K  +P    D+RPISL   + KI++KV+A
Sbjct: 362 VGKEVQQMVLQVLNNSMETEELNKTFIVLIPKGKNPNTPKDYRPISLCNVVMKIITKVIA 541

Query: 392 NRLKLVLGKIISDSQTAFVKDRQILDGILIANEVV---DEARKNKRN 435
           NR+K  L  +I   Q+AFV+ R I D  LIA  V       RK KR+
Sbjct: 542 NRVKQTLPDVIDVEQSAFVQGRLITDNALIAWSVSIG*RXRRKGKRS 682


>BG587108 similar to PIR|G96509|G9 protein F27F5.21 [imported] - Arabidopsis
           thaliana, partial (17%)
          Length = 677

 Score = 76.6 bits (187), Expect(2) = 4e-24
 Identities = 39/87 (44%), Positives = 56/87 (63%)
 Frame = +3

Query: 324 FIKEFWDELKEDVMRFISDFHRNGKLTRGINTTFIALISKIDSPQRINDFRPISLVGSLY 383
           F +  W  +K D+++ ++ F  +GKL   +NTT I LI K   P R+ + RPISL    Y
Sbjct: 411 FFQHSWHIIKMDLLKMVNSFLASGKLDTRLNTTNICLIPKKKRPTRMTELRPISLCNVGY 590

Query: 384 KILSKVLANRLKLVLGKIISDSQTAFV 410
           KI+SKVL  RLK+ L  +IS++Q+AFV
Sbjct: 591 KIISKVLCQRLKVCLPSLISETQSAFV 671



 Score = 54.3 bits (129), Expect(2) = 4e-24
 Identities = 36/118 (30%), Positives = 57/118 (47%), Gaps = 5/118 (4%)
 Frame = +2

Query: 208 WQQ-SRLLWLKDGDANSKYFHSVLSGRRRRNSIISLLA-DSNLVEGVQPIRNAVLSHFRD 265
           WQQ SR +W   GD N K++H++   R  RN I+ L   D N +   Q +    + +F D
Sbjct: 53  WQQKSRNMWHISGDLNKKFYHALTKQRHARNRIVGLYDYDGNWITEEQGVEKVAVDYFED 232

Query: 266 HFAARHTSRVGIDNLPFKCLSHTD---GSGLTKPFSADEVKSAVWDCDSYKSPGPDGV 320
            F  + T+  G D    +  S         L +  + +EV+ A++     K+PGPDG+
Sbjct: 233 LF--QRTTPTGFDGFLDEITSSITPQMNQRLLRLATEEEVRLALFIMHPEKAPGPDGM 400


>BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgaris}, partial
           (69%)
          Length = 616

 Score =  107 bits (268), Expect = 2e-23
 Identities = 58/154 (37%), Positives = 96/154 (61%), Gaps = 1/154 (0%)
 Frame = +3

Query: 293 LTKPFSADEVKSAVWDCDSYKSPGPDGVNFGFIKEFWDELKEDVMRFISDFHRNGKLTRG 352
           L   F+A EVK+A++  DS K+PG DG N  F K  W+ + + V+  I DF + G + + 
Sbjct: 12  LCSEFTAVEVKNALFSMDSSKAPGIDGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKI 191

Query: 353 INTTFIALISKIDSPQRINDFRPISLVGSLYKILSKVLANRLKLVLGKIISDSQTAFVKD 412
           IN T++ L+ K  +   + +FRPI+    +YKI+SK+L +R++ VL  ++S++Q+AFVK 
Sbjct: 192 INCTYVTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKG 371

Query: 413 RQILDGILIANEVVDE-ARKNKRN*CCSKLILRR 445
           R I D I++++E+V   +RK     C  K+ L +
Sbjct: 372 RVIFDNIILSHELVKSYSRKGISPRCMVKIDLXK 473


>TC90516 
          Length = 983

 Score =  106 bits (265), Expect = 4e-23
 Identities = 65/205 (31%), Positives = 111/205 (53%)
 Frame = -2

Query: 222 NSKYFHSVLSGRRRRNSIISLLADSNLVEGVQPIRNAVLSHFRDHFAARHTSRVGIDNLP 281
           N+ YF + +  R  RNSI +   +   ++ V   + A+++ F  HF+   T R  + ++ 
Sbjct: 742 NTTYFLACVKNRGMRNSISAPRVE-RWMDDVAKNKQAIVNFFTHHFSDP*TYRPTMGDID 566

Query: 282 FKCLSHTDGSGLTKPFSADEVKSAVWDCDSYKSPGPDGVNFGFIKEFWDELKEDVMRFIS 341
           F  +S+ D   L+  F   +++  V   D  +SP PDG N  F     + LK D+     
Sbjct: 565 FFHISNLDNVLLSAQFLVSKMELVVSSLDGNESPRPDGFNLNFFIRLRNMLKADIEIMFE 386

Query: 342 DFHRNGKLTRGINTTFIALISKIDSPQRINDFRPISLVGSLYKILSKVLANRLKLVLGKI 401
            F+    L +  +  F+ LISK++ P  + DF  +S +GSL K+++KVLA RL  ++ KI
Sbjct: 385 QFYTPANLLKIFS*YFLTLISKVEYPILLGDFSLMSFLGSL*KLMAKVLALRLAHIMEKI 206

Query: 402 ISDSQTAFVKDRQILDGILIANEVV 426
           I  +Q+ FV+ RQ +DG++  NE++
Sbjct: 205 IFVNQSTFVRGRQHVDGVVAINEII 131


>BG586267 weakly similar to PIR|A84888|A8 hypothetical protein At2g45230
           [imported] - Arabidopsis thaliana, partial (16%)
          Length = 794

 Score =  102 bits (254), Expect = 8e-22
 Identities = 62/168 (36%), Positives = 95/168 (55%), Gaps = 7/168 (4%)
 Frame = +3

Query: 203 NSSILW-QQSRLLWLKDGDANSKYFHSVLSGRRRRNSIISLLADSNLVEGVQP-IRNAVL 260
           N  I W Q+SRL WL+ GD N+K+FH+V   RR +N I+SL+ D +    V+  +     
Sbjct: 120 NEEIFWMQKSRLNWLRSGDRNTKFFHAVTKNRRAQNRILSLIDDDDKEWFVEEDLGRLAD 299

Query: 261 SHFRDHFAARHTSRVGI-----DNLPFKCLSHTDGSGLTKPFSADEVKSAVWDCDSYKSP 315
           SHF+  +++     VGI     +++P   ++    + L    S +EV+ AV+D + +K P
Sbjct: 300 SHFKLLYSSED---VGITLEDWNSIP-AIVTEEQNAQLMAQISREEVREAVFDINPHKCP 467

Query: 316 GPDGVNFGFIKEFWDELKEDVMRFISDFHRNGKLTRGINTTFIALISK 363
           GPDG+N  F ++FWD + +D+     +F R GKL  GIN T I   SK
Sbjct: 468 GPDGMNVFFFQQFWDTMGDDLTSMAQEFLRTGKLEEGINKTNIWFGSK 611



 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 35/77 (45%), Positives = 47/77 (60%)
 Frame = +1

Query: 347 GKLTRGINTTFIALISKIDSPQRINDFRPISLVGSLYKILSKVLANRLKLVLGKIISDSQ 406
           G L R        L+ K    +R+ +FRPISL    YKI+SKVL+ RLK VL  II+++Q
Sbjct: 562 GNLKRESTKQTSGLVPKKLEAKRLVEFRPISLCNVAYKIVSKVLSKRLKSVLPWIITETQ 741

Query: 407 TAFVKDRQILDGILIAN 423
            AF + + I D ILIA+
Sbjct: 742 AAFGRRQLISDNILIAH 792


>AW736247 weakly similar to PIR|T14619|T146 reverse transcriptase - beet
           retrotransposon (fragment), partial (4%)
          Length = 305

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = +1

Query: 297 FSADEVKSAVWDCDSYKS--PGPDGVNFGFIKEFWDELKEDVMRFISDFHRNGKLTRG 352
           FS +EV+ AVWDCDS  S  PGPDGVNF F+KE+W+ +K D +R + +FH NGKL +G
Sbjct: 121 FSEEEVRKAVWDCDSSHS*NPGPDGVNFTFVKEYWELIKVDFLRVVMEFHTNGKLGKG 294


>TC81386 similar to GP|10140689|gb|AAG13524.1 putative non-LTR retroelement
           reverse transcriptase {Oryza sativa (japonica
           cultivar-group)}, partial (1%)
          Length = 798

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 64/247 (25%), Positives = 112/247 (44%), Gaps = 6/247 (2%)
 Frame = -1

Query: 1   DFNAVRYAEERKSSRGISGV--IDYHHFSDFIVDNSLIDLSLCGRRFTWF---KGDGNAM 55
           DFN +  + E + S   + +  +D+  +SD    N+L  L   G  FTW    +G  N  
Sbjct: 726 DFNTILGSHEHQGSHTPARLPMLDFQQWSDV---NNLFHLPTRGSAFTWTNGRRGRNNTR 556

Query: 56  SRIDRFLLSEEWCLQWPNSFQVALLRGLSDHCPLQLSVDEENWGPRPS-RMLKCWQDLPG 114
            R+DR ++++       +     L +  SDH P+   +  +N     S + +K W   P 
Sbjct: 555 KRLDRSIVNQLMIDNCESLSACTLTKLRSDHFPILFELQTQNIQFSSSFKFMKMWSAHPD 376

Query: 115 YNQFVKDKLKSFQIEGWGGFVLREKLKFIKTALKEWHIGHASNIPGKIDSLKKRQADFDD 174
               +K    + Q+ G   FVL +KLK +K  LK W+     N+  ++D+  K   D   
Sbjct: 375 CINIIKQCWAN-QVVGCPMFVLNQKLKNLKEVLKVWNKNTFGNVHSQVDNAYKELDDIQV 199

Query: 175 KGDVGDLSADEILELRGITHDLHSLSRVNSSILWQQSRLLWLKDGDANSKYFHSVLSGRR 234
           K D    S   + + +    +L S   +      ++S++ W  +GD N+ +FH V +  +
Sbjct: 198 KIDSIGYSDVLMDQEKAAQLNLESALNIEEVFWHEKSKVNWHCEGDRNTAFFHRV-AKIK 22

Query: 235 RRNSIIS 241
           R +S+IS
Sbjct: 21  RTSSLIS 1


>CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [imported] -
            Sulfolobus solfataricus, partial (3%)
          Length = 789

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 47/121 (38%), Positives = 61/121 (49%), Gaps = 1/121 (0%)
 Frame = -3

Query: 919  YGISRCRLRFPFLLGDYCVIGCRLRIIFLGVA*STVRFVCVSQGAV-WKRLHLIFLFIAP 977
            +G  R   R+P LLG + VIGC    I     *   + VCV   AV W R ++ F  +  
Sbjct: 583  FGTDRFL*RYPSLLGGFFVIGCLPNRI*SIEV*FQQKLVCVFLVAVPWNRHNICFSLVRI 404

Query: 978  LLVLCGILSGLGSECQVLTLLLLRPISFSLFTLQVTQRLVSHFFNLFGYFVFWWFGTNVI 1037
            LL   G    +G      TL+      FSLFT QV  RL+S F +LFG+FV  ++G NV 
Sbjct: 403  LLHF-GRWFVIGLVLLEWTLMFCLITLFSLFTQQVAIRLLSLFSSLFGFFVPGFYGLNVT 227

Query: 1038 I 1038
            I
Sbjct: 226  I 224


>AW686588 
          Length = 567

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 44/116 (37%), Positives = 56/116 (47%)
 Frame = +2

Query: 927  RFPFLLGDYCVIGCRLRIIFLGVA*STVRFVCVSQGAVWKRLHLIFLFIAPLLVLCGILS 986
            RFPF LG    IG +L+ I  GV     R + V   AV ++  +   FI  LL   G +S
Sbjct: 152  RFPF*LGV*FGIGFQLKPI**GVGVWQSRQLGVWLDAVLQKPQITCSFIVLLLAQFGSIS 331

Query: 987  GLGSECQVLTLLLLRPISFSLFTLQVTQRLVSHFFNLFGYFVFWWFGTNVIIGFLI 1042
              G  C  L  ++L    FSL  +QV +  V    + FGYFV  WFG N    FLI
Sbjct: 332  VRGLACPELIPMILVTTLFSLLLVQVIRGRVDPLCSSFGYFVCGWFGMNATTDFLI 499


>BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-like protein
           {Arabidopsis thaliana}, partial (18%)
          Length = 789

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 24/65 (36%), Positives = 46/65 (69%)
 Frame = -3

Query: 368 QRINDFRPISLVGSLYKILSKVLANRLKLVLGKIISDSQTAFVKDRQILDGILIANEVVD 427
           +R++++R I+   + YKI++K+L+ R++ +L  IIS SQ+AFV  R I D +LI ++++ 
Sbjct: 784 KRVSEYRTIAPCNTQYKIIAKILSKRMQPLLRSIISPSQSAFVPGRAISDNVLITHKILH 605

Query: 428 EARKN 432
             R++
Sbjct: 604 YLRQS 590


>TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non-LTR
            retroelement reverse transcriptase {Oryza sativa
            (japonica cultivar-group)}, partial (2%)
          Length = 1262

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 59/174 (33%), Positives = 78/174 (43%), Gaps = 3/174 (1%)
 Frame = +3

Query: 837  LIWLTLVGRVTERCGSGGVR*GRGRMSC*RSVGF*LMVSFCSIISLTGGNGTRILLAVIV 896
            L W    GR+TE  GSG      G+ S * SV F  +  FC I S+T G+G   L  V  
Sbjct: 381  LTWGGWGGRLTEGRGSGHAACLCGKRSV*GSVVFF*ITLFCRITSMTNGDGC*TL*MVTQ 560

Query: 897  WEAPIFILLLHWSLQTFLWETLYGISRCRLRFPFLLGDYCVIGCRLRIIFL--GVA*STV 954
             ++ I  LL     QT LW  ++GI+    RF +L G     G   + I+   G     +
Sbjct: 561  *KSSIDTLLPQVIFQTGLWLMMFGINIFLQRFLYLCGASFATGFLQKTIWCIEGFFLQQM 740

Query: 955  RFVCVSQGAVWKR-LHLIFLFIAPLLVLCGILSGLGSECQVLTLLLLRPISFSL 1007
            R V V  GA+    LH  F +IA   V  G+L  +G       L+    I FSL
Sbjct: 741  RHVYV--GALTPNPLHTSF-YIATFFVHFGLL*EIGLVFHQCLLVSFEHILFSL 893



 Score = 29.6 bits (65), Expect = 6.6
 Identities = 14/26 (53%), Positives = 16/26 (60%)
 Frame = +2

Query: 723 GYGNLIALC*VNGVGGCWWIEADFGI 748
           G+  LI  C* NGVG  WWI+   GI
Sbjct: 38  GWELLIYRC*ENGVGVFWWIKRGCGI 115


>TC93122 
          Length = 795

 Score = 40.0 bits (92), Expect(2) = 7e-04
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = -1

Query: 1035 NVIIGFLIISKPQLTI*QIKFDF 1057
            NVII FLIISKPQL  *QIKFDF
Sbjct: 117  NVIIDFLIISKPQLNY*QIKFDF 49



 Score = 21.9 bits (45), Expect(2) = 7e-04
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 1057 FILYGGFKLITPI 1069
            FILYGGF+L   I
Sbjct: 50   FILYGGFQLTKQI 12


>TC87722 similar to SP|O24496|GL2C_ARATH Hydroxyacylglutathione hydrolase
           cytoplasmic (EC 3.1.2.6) (Glyoxalase II) (Glx II).,
           partial (84%)
          Length = 876

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 10/22 (45%), Positives = 15/22 (67%)
 Frame = +1

Query: 734 NGVGGCWWIEADFGIGSW*RGM 755
           + +G CWW   D GIG+W +G+
Sbjct: 172 SSLGSCWWKREDKGIGAWNQGL 237


>TC92645 
          Length = 561

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 14/36 (38%), Positives = 20/36 (54%)
 Frame = +3

Query: 293 LTKPFSADEVKSAVWDCDSYKSPGPDGVNFGFIKEF 328
           LT PFS DE+ +A++     K+ G DG+N      F
Sbjct: 306 LTAPFSVDEIWTAIFQMHHDKAFGLDGLNLAVYYRF 413


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.344    0.155    0.538 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,145,941
Number of Sequences: 36976
Number of extensions: 681368
Number of successful extensions: 6378
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2621
Number of HSP's successfully gapped in prelim test: 372
Number of HSP's that attempted gapping in prelim test: 3638
Number of HSP's gapped (non-prelim): 3254
length of query: 1087
length of database: 9,014,727
effective HSP length: 106
effective length of query: 981
effective length of database: 5,095,271
effective search space: 4998460851
effective search space used: 4998460851
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.5 bits)
S2: 64 (29.3 bits)


Medicago: description of AC135464.5