TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135320.11 + phase: 0 
         (165 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AJ501531 similar to PIR|D71411|D714 hypothetical protein - Arabi...   282  4e-77
BF648928 weakly similar to GP|11994285|dbj emb|CAB10262.1~gene_i...    78  2e-15
TC85569 homologue to SP|P27879|HS11_MEDSA 18.1 kDa class I heat ...    29  0.75
TC88992 similar to SP|P19243|HS11_PEA 18.1 kDa class I heat shoc...    29  0.75
TC85567 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat ...    29  0.98
TC85568 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat ...    29  0.98
TC85566 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat ...    29  0.98
TC85565 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat ...    29  0.98
TC85564 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat ...    29  0.98
TC84982 similar to PIR|T45842|T45842 calcium dependent protein k...    28  1.7
TC89603 similar to PIR|S71566|S71566 heat shock protein  17.7K -...    28  1.7
TC93539 weakly similar to GP|17063165|gb|AAL32979.1 At1g12970/F1...    27  2.9
TC88437 similar to GP|1621463|gb|AAB17192.1| laccase {Liriodendr...    27  2.9
TC81367 similar to GP|22530880|gb|AAM96944.1 small heat shock pr...    27  3.7
BQ146143 weakly similar to GP|14009833|gb| small heat shock prot...    27  3.7
TC80109 similar to GP|22530880|gb|AAM96944.1 small heat shock pr...    27  3.7
TC79482 similar to PIR|F86424|F86424 unknown protein  69948-6867...    27  4.9
TC87412 similar to PIR|T00587|T00587 probable ubiquitin--protein...    26  6.4
TC89674 similar to PIR|T51779|T51779 non-phototropic hypocotyl 3...    26  6.4
TC85493 similar to PIR|T06449|T06449 probable heat shock protein...    26  8.3

>AJ501531 similar to PIR|D71411|D714 hypothetical protein - Arabidopsis
           thaliana, partial (51%)
          Length = 430

 Score =  282 bits (722), Expect = 4e-77
 Identities = 139/139 (100%), Positives = 139/139 (100%)
 Frame = +2

Query: 16  MNPLSQAETLLSMSGFSNNNNKLRRLPHVFSRILQLPLRSDADVSIEEEPTCFRFVAETD 75
           MNPLSQAETLLSMSGFSNNNNKLRRLPHVFSRILQLPLRSDADVSIEEEPTCFRFVAETD
Sbjct: 14  MNPLSQAETLLSMSGFSNNNNKLRRLPHVFSRILQLPLRSDADVSIEEEPTCFRFVAETD 193

Query: 76  SSLGHVETHTLHIHPGVTKIVVRASHSLHFSLDDLHPDIWRFRLPESVVPELATAVFVDG 135
           SSLGHVETHTLHIHPGVTKIVVRASHSLHFSLDDLHPDIWRFRLPESVVPELATAVFVDG
Sbjct: 194 SSLGHVETHTLHIHPGVTKIVVRASHSLHFSLDDLHPDIWRFRLPESVVPELATAVFVDG 373

Query: 136 ELIVTVPKAFDDENTPEPI 154
           ELIVTVPKAFDDENTPEPI
Sbjct: 374 ELIVTVPKAFDDENTPEPI 430


>BF648928 weakly similar to GP|11994285|dbj
           emb|CAB10262.1~gene_id:F16J14.9~similar to unknown
           protein {Arabidopsis thaliana}, partial (35%)
          Length = 196

 Score = 77.8 bits (190), Expect = 2e-15
 Identities = 40/63 (63%), Positives = 46/63 (72%)
 Frame = +1

Query: 96  VVRASHSLHFSLDDLHPDIWRFRLPESVVPELATAVFVDGELIVTVPKAFDDENTPEPIG 155
           VVR   SL  SLD L  D+WRFRLP+S +PELA+AVFVDGELIVTVPK  + +N     G
Sbjct: 1   VVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPKGHEVQNVE---G 171

Query: 156 GGG 158
           GGG
Sbjct: 172 GGG 180


>TC85569 homologue to SP|P27879|HS11_MEDSA 18.1 kDa class I heat shock
           protein (Fragment). [Alfalfa] {Medicago sativa}, partial
           (48%)
          Length = 623

 Score = 29.3 bits (64), Expect = 0.75
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPKAFDDENTPEP 153
           RFRLPE+   +   A   +G L VTVPK  ++   P P
Sbjct: 111 RFRLPENAKMDQVKAAMENGVLTVTVPK--EEIKKPRP 218


>TC88992 similar to SP|P19243|HS11_PEA 18.1 kDa class I heat shock protein
           (HSP 18.1). [Garden pea] {Pisum sativum}, partial (94%)
          Length = 658

 Score = 29.3 bits (64), Expect = 0.75
 Identities = 15/28 (53%), Positives = 18/28 (63%)
 Frame = +1

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPK 143
           RFRLPE+V  +   A   +G L VTVPK
Sbjct: 361 RFRLPENVKMDQVKAGMENGVLTVTVPK 444


>TC85567 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat shock
           protein. [Alfalfa] {Medicago sativa}, complete
          Length = 901

 Score = 28.9 bits (63), Expect = 0.98
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPK 143
           RFRLPE+   +   A   +G L VTVPK
Sbjct: 573 RFRLPENAKMDQVKAAMENGVLTVTVPK 656


>TC85568 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat shock
           protein. [Alfalfa] {Medicago sativa}, complete
          Length = 982

 Score = 28.9 bits (63), Expect = 0.98
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPK 143
           RFRLPE+   +   A   +G L VTVPK
Sbjct: 438 RFRLPENAKMDQVKAAMENGVLTVTVPK 521


>TC85566 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat shock
           protein. [Alfalfa] {Medicago sativa}, complete
          Length = 946

 Score = 28.9 bits (63), Expect = 0.98
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPK 143
           RFRLPE+   +   A   +G L VTVPK
Sbjct: 403 RFRLPENAKMDQVKAAMENGVLTVTVPK 486


>TC85565 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat shock
           protein. [Alfalfa] {Medicago sativa}, complete
          Length = 735

 Score = 28.9 bits (63), Expect = 0.98
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPK 143
           RFRLPE+   +   A   +G L VTVPK
Sbjct: 435 RFRLPENAKMDQVKAAMENGVLTVTVPK 518


>TC85564 homologue to SP|P27880|HS12_MEDSA 18.2 kDa class I heat shock
           protein. [Alfalfa] {Medicago sativa}, complete
          Length = 983

 Score = 28.9 bits (63), Expect = 0.98
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPK 143
           RFRLPE+   +   A   +G L VTVPK
Sbjct: 582 RFRLPENAKMDQVKAAMENGVLAVTVPK 665


>TC84982 similar to PIR|T45842|T45842 calcium dependent protein kinase-like
           - Arabidopsis thaliana, partial (6%)
          Length = 507

 Score = 28.1 bits (61), Expect = 1.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 104 HFSLDDLHPDIWRFRLPESVVPE 126
           H   +D   D+WR RLPE V PE
Sbjct: 325 HLPEEDY*KDLWRKRLPEFVFPE 257


>TC89603 similar to PIR|S71566|S71566 heat shock protein  17.7K - common
           sunflower, partial (64%)
          Length = 1320

 Score = 28.1 bits (61), Expect = 1.7
 Identities = 13/28 (46%), Positives = 18/28 (63%)
 Frame = +1

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPK 143
           RFRLP++   +   A   +G LIVT+PK
Sbjct: 286 RFRLPQNAKVDQVKANMENGVLIVTIPK 369


>TC93539 weakly similar to GP|17063165|gb|AAL32979.1 At1g12970/F13K23_18
           {Arabidopsis thaliana}, partial (29%)
          Length = 852

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 8   NISIAYNMMNPLSQAET-LLSMSGFSNNNNKLRRLPHVFSRILQL 51
           NIS  +N M  L +    L+++     +NN++R LP+ F R+ +L
Sbjct: 167 NISSNFNDMTQLPETVGGLVNLKELDLSNNQIRALPYAFCRLEKL 301


>TC88437 similar to GP|1621463|gb|AAB17192.1| laccase {Liriodendron
           tulipifera}, partial (41%)
          Length = 984

 Score = 27.3 bits (59), Expect = 2.9
 Identities = 14/32 (43%), Positives = 19/32 (58%)
 Frame = -1

Query: 11  IAYNMMNPLSQAETLLSMSGFSNNNNKLRRLP 42
           I +NM+N L+Q         FSNNN++ R LP
Sbjct: 348 IVWNMINNLNQQSV-----PFSNNNSRTRELP 268


>TC81367 similar to GP|22530880|gb|AAM96944.1 small heat shock protein
           {Lycopersicon esculentum}, partial (47%)
          Length = 822

 Score = 26.9 bits (58), Expect = 3.7
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPKA 144
           R  LPE++  E   A   DG L VT+PKA
Sbjct: 632 RISLPENIEFEKIKAQVRDGVLYVTIPKA 718


>BQ146143 weakly similar to GP|14009833|gb| small heat shock protein HSP17.8
           {Triticum aestivum}, partial (12%)
          Length = 693

 Score = 26.9 bits (58), Expect = 3.7
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPKA 144
           R  LPE++  E   A   DG L VT+PKA
Sbjct: 190 RISLPENIEFEKIKAQVRDGVLYVTIPKA 276


>TC80109 similar to GP|22530880|gb|AAM96944.1 small heat shock protein
           {Lycopersicon esculentum}, partial (60%)
          Length = 1047

 Score = 26.9 bits (58), Expect = 3.7
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPKA 144
           R  LPE+V  E   A   DG L +T+PKA
Sbjct: 695 RIALPENVQFENIKAEVKDGVLYITIPKA 781


>TC79482 similar to PIR|F86424|F86424 unknown protein  69948-68670
           [imported] - Arabidopsis thaliana, partial (85%)
          Length = 895

 Score = 26.6 bits (57), Expect = 4.9
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 103 LHFSLDDLHPDIWRFRLPESVVPELATAVFVDG--ELIVTVPKAFDDENT 150
           LHF  D L P + + + P + + +L   ++ DG  E+  T+ KA+ D  T
Sbjct: 517 LHFKEDKLKPAMDKEKDPMAGIMDLMKNMYEDGDEEMKKTIAKAWTDART 666


>TC87412 similar to PIR|T00587|T00587 probable ubiquitin--protein ligase (EC
           6.3.2.19) - Arabidopsis thaliana, partial (42%)
          Length = 1628

 Score = 26.2 bits (56), Expect = 6.4
 Identities = 15/44 (34%), Positives = 22/44 (49%)
 Frame = -1

Query: 80  HVETHTLHIHPGVTKIVVRASHSLHFSLDDLHPDIWRFRLPESV 123
           HV   + H+H  V  I++       F LD LHP+ W    P+S+
Sbjct: 845 HVGKPSYHVHMVVCIIIL-------FKLDWLHPEAWLQI*PQSL 735


>TC89674 similar to PIR|T51779|T51779 non-phototropic hypocotyl 3-like
           protein - Arabidopsis thaliana, partial (35%)
          Length = 1129

 Score = 26.2 bits (56), Expect = 6.4
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
 Frame = -1

Query: 76  SSLGHVETHTLHIHPGVTKIVVRASHSLHFSLDDLH-------PDIWRFRLPESVVP 125
           SSL    +  L I P    I+  +   LHFSL  LH       P   +F+ P+ ++P
Sbjct: 589 SSLTLSTSCLLRIRPSFQGILQHSGLILHFSLSALHETRNRIWPQSRKFQDPQEILP 419


>TC85493 similar to PIR|T06449|T06449 probable heat shock protein - garden
           pea (fragment), partial (94%)
          Length = 850

 Score = 25.8 bits (55), Expect = 8.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 116 RFRLPESVVPELATAVFVDGELIVTVPK 143
           RFRLPE+   +   A   +G L V+VPK
Sbjct: 383 RFRLPENAKVDEVKAGMENGVLTVSVPK 466


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.136    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,541,629
Number of Sequences: 36976
Number of extensions: 74063
Number of successful extensions: 408
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of query: 165
length of database: 9,014,727
effective HSP length: 89
effective length of query: 76
effective length of database: 5,723,863
effective search space: 435013588
effective search space used: 435013588
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)