BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135319.10 + phase: 1 /pseudo/partial
(430 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88934 similar to PIR|T00434|T00434 probable kinesin heavy chai... 214 5e-56
TC79642 similar to PIR|T07397|T07397 kinesin heavy chain-like pr... 159 9e-45
TC80825 similar to PIR|F84614|F84614 probable kinesin heavy chai... 132 5e-35
TC81646 similar to GP|13536981|dbj|BAB40709. BY-2 kinesin-like p... 123 2e-28
AW690287 similar to GP|9759626|db contains similarity to kinesin... 110 1e-24
AW685809 similar to PIR|E84792|E8 probable kinesin heavy chain [... 87 9e-18
AL371575 similar to PIR|C85065|C85 kinesin-like protein [importe... 86 3e-17
TC80963 weakly similar to PIR|F84614|F84614 probable kinesin hea... 80 1e-15
TC80383 similar to PIR|C85065|C85065 kinesin-like protein [impor... 74 8e-14
BE203495 weakly similar to PIR|T48258|T48 kinesin-like protein -... 74 1e-13
BI272139 similar to PIR|C96661|C9 kinesin-like protein 73641-79... 71 9e-13
TC80343 similar to PIR|C96661|C96661 kinesin-like protein 73641... 70 1e-12
TC83691 similar to PIR|T00434|T00434 probable kinesin heavy chai... 69 3e-12
AJ499156 similar to GP|10176794|db kinesin-like protein {Arabido... 66 2e-11
TC92104 similar to PIR|D86151|D86151 hypothetical protein AAF764... 65 4e-11
CA989870 similar to GP|18201934|g kinesin-like protein heavy cha... 65 5e-11
BQ147568 64 1e-10
BI265352 similar to PIR|F84599|F84 probable kinesin heavy chain ... 62 6e-10
BE999515 similar to PIR|T07397|T0 kinesin heavy chain-like prote... 61 7e-10
BQ149758 weakly similar to PIR|F84614|F8 probable kinesin heavy ... 60 1e-09
>TC88934 similar to PIR|T00434|T00434 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (49%)
Length = 2193
Score = 214 bits (545), Expect = 5e-56
Identities = 144/393 (36%), Positives = 216/393 (54%), Gaps = 5/393 (1%)
Frame = +3
Query: 10 YLEVSLERRRLNNEVIELKGNIRVFCRCRPLNENEIANGSAVSVVNFESNSEELQVVCSD 69
Y V E R+L NEV +LKG+IRV+CR RP + + S V N E + V +
Sbjct: 24 YHRVLEENRKLYNEVQDLKGSIRVYCRVRPFLPGQPNHSSTVE--NIEDGVITINVPSKN 197
Query: 70 SS-KKQFKFDHVFKPEDNQEAVFAQTKPIVASVLDGHNVCIFAYGQTGTGKTFTMEG--- 125
++ F F+ VF P Q VFA +P+V SVLDG NVCIFAYGQTG+GKTFTM G
Sbjct: 198 GKGRRSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKE 377
Query: 126 -TPEHRGVNYRTLEELFRVSEERQGTIKYELLVSMLEVYNEKIKDLLAGNSSEATKKLEV 184
T + +GVNYR L +LF + +R+ T +Y++ V M+E+YNE+++DLL + + K+LE+
Sbjct: 378 ITEKSQGVNYRALSDLFYTANQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGT--NKRLEI 551
Query: 185 KQAADGTQEVPGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRSHWQIFYIIVDD 244
+ + VP V + V E++ G++ R+VG+T+ N+ SSRSH + V
Sbjct: 552 RSNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSH-SCLTVHVQG 728
Query: 245 KKMVLHAVWCG*LLWGKI*SMAREQKVTFG*LT*LAVSV*GKLKLKEKG*RNLSS*ISLY 304
+ + AV G + + +A ++V T +LKE ++++ +S
Sbjct: 729 RDLTSGAVLRGCM---HLVDLAGSERVDKSEAT--------GDRLKEA--QHINKSLSAL 869
Query: 305 HHLVMLLQPLLPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLN 364
++ L + ++ RNSKLT +LQ SLGG KTLMFV ISP + + ET+ +L
Sbjct: 870 GDVI----ASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEANAVGETISTLK 1037
Query: 365 FATRVRGIESGPARKQVDLTELLKYKQMAEKSK 397
FA RV +E G AR D ++ + K+ K
Sbjct: 1038FAERVATVELGAARVNKDGADVKELKEQIASLK 1136
>TC79642 similar to PIR|T07397|T07397 kinesin heavy chain-like protein (clone
PKCBP) - potato, partial (42%)
Length = 2321
Score = 159 bits (401), Expect(2) = 9e-45
Identities = 111/359 (30%), Positives = 186/359 (50%)
Frame = +3
Query: 63 LQVVCSDSSKKQFKFDHVFKPEDNQEAVFAQTKPIVASVLDGHNVCIFAYGQTGTGKTFT 122
++ + D + KQ+ +D VF + QE VF T+ +V S +DG+NVCIFAYGQTG+GKTFT
Sbjct: 1053 VEFLWKDDNPKQYIYDRVFGGDATQETVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFT 1232
Query: 123 MEGTPEHRGVNYRTLEELFRVSEERQGTIKYELLVSMLEVYNEKIKDLLAGNSSEATKKL 182
+ G+ ++ G+ R + ELFR+ + L M+E+Y + + DLL +++ + +L
Sbjct: 1233 IYGSEDNPGLTPRAIAELFRILRRDSNKYSFSLKAYMVELYQDTLIDLLLPKNAKHS-RL 1409
Query: 183 EVKQAADGTQEVPGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRSHWQIFYIIV 242
++K+ + G V + + + + I++ G+ R + T NE SSRSH I I+V
Sbjct: 1410 DIKKDSTGMVVVENVTVMSISTIEELNYIIQKGSERRHISGTQMNEESSRSH-LILSIVV 1586
Query: 243 DDKKMVLHAVWCG*LLWGKI*SMAREQKVTFG*LT*LAVSV*GKLKLKEKG*RNLSS*IS 302
+ + +V G L + + R +K G + + K ++++ +S
Sbjct: 1587 ESTNLQSQSVARGKLSFVDLAGSERVKKS-------------GSMGSQLKEAQSINKSLS 1727
Query: 303 LYHHLVMLLQPLLPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCS 362
++ L + P RN KLT ++ SLGG+ KTLMFV +SP L ET S
Sbjct: 1728 ALGDVISALSSGGQHTPY----RNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNS 1895
Query: 363 LNFATRVRGIESGPARKQVDLTELLKYKQMAEKSKHDEKEARKLQDNLQSVQMRLATRE 421
L +A+RVR I + P+ K V E+ + K++ K A + +D L+ +Q +E
Sbjct: 1896 LMYASRVRSIVNDPS-KNVSSKEIARLKKLVTYWKQQAGRAIEHED-LEEIQDERPNKE 2066
Score = 39.7 bits (91), Expect(2) = 9e-45
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 10 YLEVSLERRRLNNEVIELKGNIRVFCRCRPLNENEIA 46
Y E + R+R N + ++KG IRV+CR RP++E E++
Sbjct: 899 YKEEQVLRKRYFNVIEDMKGKIRVYCRLRPISEKEVS 1009
>TC80825 similar to PIR|F84614|F84614 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (16%)
Length = 1771
Score = 132 bits (331), Expect(2) = 5e-35
Identities = 88/221 (39%), Positives = 130/221 (58%)
Frame = +3
Query: 151 IKYELLVSMLEVYNEKIKDLLAGNSSEATKKLEVKQAADGTQEVPGLVETHVYGADGVWE 210
+ + L+ YNE+I+DLLA + A+K+LE+KQ +G VPG+VE V VW
Sbjct: 24 VHFTYLLVCSRFYNEQIRDLLA--TGPASKRLEIKQNYEGHHHVPGVVEAKVDNISDVWT 197
Query: 211 ILKSGNRVRSVGSTSANELSSRSHWQIFYIIVDDKKMVLHAVWCG*LLWGKI*SMAREQK 270
+L++G+ R+VGS + NE SSRSH + ++ K +++ LW + +A ++
Sbjct: 198 VLQAGSNARAVGSNNVNEHSSRSHCMLCIMV--KTKNLMNGECTKSKLW--LVDLAGSER 365
Query: 271 VTFG*LT*LAVSV*GKLKLKEKG*RNLSS*ISLYHHLVMLLQPLLPNQPTYLTDRNSKLT 330
+ V G+ +LKE +N++ +S ++ L + +++ RNSKLT
Sbjct: 366 LA-------KTDVQGE-RLKEA--QNINRSLSALGDVISALAA----KSSHIPYRNSKLT 503
Query: 331 HILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRG 371
H+LQ SLGGD KTLMFVQISPS D+ ETL SLNFATRVRG
Sbjct: 504 HLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRG 626
Score = 33.9 bits (76), Expect(2) = 5e-35
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 372 IESGPARKQVDLTELLKYKQMAEKSKHDEKEARKLQDNLQSVQMRLA 418
+E GP +KQ+D EL K K M +K++ E R +++L+ ++ + A
Sbjct: 628 VELGPVKKQIDTGELQKTKAMLDKAR---SECRSKEESLRKLEEKFA 759
>TC81646 similar to GP|13536981|dbj|BAB40709. BY-2 kinesin-like protein 5
{Nicotiana tabacum}, partial (50%)
Length = 1456
Score = 123 bits (308), Expect = 2e-28
Identities = 69/155 (44%), Positives = 90/155 (57%)
Frame = +1
Query: 84 EDNQEAVFAQTKPIVASVLDGHNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRV 143
E +QE+VF +PI+ S +DGHNVC+FAYGQTGTGKTFTM+GT E G+ R LEELFR
Sbjct: 7 EASQESVFVDVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFR- 183
Query: 144 SEERQGTIKYELLVSMLEVYNEKIKDLLAGNSSEATKKLEVKQAADGTQEVPGLVETHVY 203
G+ + +SMLEVY ++DLLA ++ L ++ G E+ GL E +
Sbjct: 184 QASMDGSSSFTFSMSMLEVYMGNVRDLLANSN------LNIQTDPKGLVEIEGLSEVQIS 345
Query: 204 GADGVWEILKSGNRVRSVGSTSANELSSRSHWQIF 238
G R RS T+ NE SSRSH I+
Sbjct: 346 DCAKAKWWYNKGRRCRSTSWTNVNEASSRSHCFIY 450
Score = 78.2 bits (191), Expect = 6e-15
Identities = 45/108 (41%), Positives = 66/108 (60%), Gaps = 5/108 (4%)
Frame = +3
Query: 315 LPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIES 374
L + +++ RNSKLT +L+ SLG K LM V ISPS D+ ET+CSLNFA R R IES
Sbjct: 642 LKRKRSHVPYRNSKLTQLLRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIES 821
Query: 375 -----GPARKQVDLTELLKYKQMAEKSKHDEKEARKLQDNLQSVQMRL 417
++KQ + +K ++ E K EK+ + L D +Q+V+++L
Sbjct: 822 IKEVPMESKKQKE----MKIMELEENIKEAEKQRQSLGDQIQNVELKL 953
>AW690287 similar to GP|9759626|db contains similarity to kinesin heavy
chain~gene_id:MNA5.20 {Arabidopsis thaliana}, partial
(17%)
Length = 676
Score = 110 bits (274), Expect = 1e-24
Identities = 65/149 (43%), Positives = 94/149 (62%), Gaps = 5/149 (3%)
Frame = +2
Query: 16 ERRRLNNEVIELKGNIRVFCRCRPLNENEIANGSAVSVVNFESNSEELQVVCSD----SS 71
E++RL N+++ KG+IRVFCR RPL E+E SVV+F + ++V D +S
Sbjct: 212 EKKRLFNDLLTSKGSIRVFCRTRPLFEDE-----GPSVVDFPDDYT-IRVNTGDESLANS 373
Query: 72 KKQFKFDHVFKPEDNQEAVFAQTKPIVASVLDGHNVCIFAYGQTGTGKTFTMEGTPEHRG 131
KK F+FD V+ P Q +F+ +P+V S LDG+NV IFAYGQT +GKT TMEG+ RG
Sbjct: 374 KKDFEFDKVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRG 553
Query: 132 VNYRTLEELFRVSE-ERQGTIKYELLVSM 159
+ R EELF ++ + T +Y+ V++
Sbjct: 554 LYARCFEELFDLTNLDTTSTSQYKFCVTV 640
>AW685809 similar to PIR|E84792|E8 probable kinesin heavy chain [imported] -
Arabidopsis thaliana, partial (14%)
Length = 651
Score = 87.4 bits (215), Expect = 9e-18
Identities = 47/106 (44%), Positives = 67/106 (62%), Gaps = 4/106 (3%)
Frame = +2
Query: 30 NIRVFCRCRPLNENEIANGSAVSVVNFESNSEELQVVCSDSSK---KQFKFDHVFKPEDN 86
N++V RCRPL++ E + VV+ N E+ V+ + ++K K F FD VF P+
Sbjct: 251 NVQVLLRCRPLSDEE-QRSNVPKVVSCNENKREVTVMHTIANKQVEKVFNFDKVFGPKSQ 427
Query: 87 QEAVFAQT-KPIVASVLDGHNVCIFAYGQTGTGKTFTMEGTPEHRG 131
Q +++ Q PIV VLDG N +FAYGQTGTGKT+TMEG +++G
Sbjct: 428 QRSIYDQAIAPIVNEVLDGFNCTVFAYGQTGTGKTYTMEGGMKNKG 565
>AL371575 similar to PIR|C85065|C85 kinesin-like protein [imported] -
Arabidopsis thaliana, partial (15%)
Length = 461
Score = 85.9 bits (211), Expect = 3e-17
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = +1
Query: 17 RRRLNNEVIELKGNIRVFCRCRPLNENEIANGSAVSV-VNFESNSEELQVVCSDSSKKQF 75
R++L+N V+ELKGNIRVFCR RPL ++ V+ + E +++ + K+ F
Sbjct: 154 RKKLHNTVLELKGNIRVFCRVRPLLQDRSETKMVVTYPTSIEMLGRGIELEQNAGQKQLF 333
Query: 76 KFDHVFKPEDNQEAVFAQTKPIVASVLDGHNVCIFAYGQTGT 117
FD VF + +Q VF + +V S LDG+ VCIFAYGQTG+
Sbjct: 334 TFDKVFNDDASQHDVFTEISQLVQSALDGYKVCIFAYGQTGS 459
>TC80963 weakly similar to PIR|F84614|F84614 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (4%)
Length = 685
Score = 80.5 bits (197), Expect = 1e-15
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = +1
Query: 2 EYEILKRKYLEVSLERRRLNNEVIELKGNIRVFCRCRPLNENEIANGSAVSVVNF 56
EYE+LKRKYL+ S ERRRL NE+IELKGNI VFCRCRPL+E+E ANG SV NF
Sbjct: 499 EYELLKRKYLDESSERRRLYNEIIELKGNIXVFCRCRPLSESEKANG-FTSVDNF 660
>TC80383 similar to PIR|C85065|C85065 kinesin-like protein [imported] -
Arabidopsis thaliana, partial (26%)
Length = 897
Score = 74.3 bits (181), Expect = 8e-14
Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 3/203 (1%)
Frame = +1
Query: 180 KKLEVKQAADGTQEVPGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRSHWQI-- 237
K+ +K A G V L V V +L RSVG T NE SSRSH+
Sbjct: 43 KQYSIKHDASGNTLVSDLTVVDVESVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTL 222
Query: 238 -FYIIVDDKKMVLHAVWCG*LLWGKI*SMAREQKVTFG*LT*LAVSV*GKLKLKEKG*RN 296
Y + + + V + +A ++++ + S +LK + ++
Sbjct: 223 RIYGVNESTDQQVQGVL-------NLIDLAGSERLS------RSGSTGDRLKETQAINKS 363
Query: 297 LSS*ISLYHHLVMLLQPLLPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDL 356
LSS + L + ++ RNSKLT++LQ LGGD KTLMFV I+P
Sbjct: 364 LSSLSDVIFALA--------KKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNIAPDQASS 519
Query: 357 TETLCSLNFATRVRGIESGPARK 379
E+LCSL FA+RV E G R+
Sbjct: 520 GESLCSLRFASRVNACEIGTPRR 588
>BE203495 weakly similar to PIR|T48258|T48 kinesin-like protein - Arabidopsis
thaliana, partial (21%)
Length = 502
Score = 73.6 bits (179), Expect = 1e-13
Identities = 50/169 (29%), Positives = 85/169 (49%), Gaps = 11/169 (6%)
Frame = +2
Query: 20 LNNEVIELKGNIRVFCRCRPLNENEIANG-----SAVSVVNFESNSE-ELQVVCSD---S 70
+NN I + +RV R RP +E + S +S+++ + S+ ++ V D S
Sbjct: 11 INNNPISVS-KVRVIVRVRPFLPHETSRNCDDPVSCISLLDQDFQSQNDVAVYLKDPFTS 187
Query: 71 SKKQFKFDHVFKPEDNQ--EAVFAQTKPIVASVLDGHNVCIFAYGQTGTGKTFTMEGTPE 128
K+ +K D F EDN + + P++ ++ G N +FAYG TG+GKT+TM+GT E
Sbjct: 188 RKECYKLDSFFDQEDNNVGQIFEREVSPMIPAIFGGCNATVFAYGATGSGKTYTMQGTEE 367
Query: 129 HRGVNYRTLEELFRVSEERQGTIKYELLVSMLEVYNEKIKDLLAGNSSE 177
G+ + + + + T + +S EVY ++ DLL +SE
Sbjct: 368 QPGLMPLAMSTILSICQNTSSTAQ----ISYYEVYMDRCYDLLELKASE 502
>BI272139 similar to PIR|C96661|C9 kinesin-like protein 73641-79546
[imported] - Arabidopsis thaliana, partial (10%)
Length = 381
Score = 70.9 bits (172), Expect = 9e-13
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Frame = +1
Query: 131 GVNYRTLEELFRVSEERQGTIKYELLVSMLEVYNEKIKDLLAGNSSEATKKLEV-KQAAD 189
GVNYR L +LF +S+ R+ +I YE+ V M+E+YNE+++DLL+ N + K+L +
Sbjct: 7 GVNYRALHDLFHISQSRKNSIVYEVGVQMVEIYNEQVRDLLSSNGPQ--KRLGIWNTTQP 180
Query: 190 GTQEVPGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRSH 234
VP V V E++ G R+ +T+ NE SSRSH
Sbjct: 181 NGLAVPDASMHSVNSMQNVLELMNIGMMNRATSATALNERSSRSH 315
>TC80343 similar to PIR|C96661|C96661 kinesin-like protein 73641-79546
[imported] - Arabidopsis thaliana, partial (17%)
Length = 1406
Score = 70.5 bits (171), Expect = 1e-12
Identities = 41/98 (41%), Positives = 57/98 (57%), Gaps = 6/98 (6%)
Frame = +3
Query: 315 LPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIES 374
L + ++ RNSKLT +LQSSLGG KTLMFVQ++P +ET+ +L FA RV G+E
Sbjct: 153 LAQKSPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVEL 332
Query: 375 GPARKQV------DLTELLKYKQMAEKSKHDEKEARKL 406
G AR +L E + + + A K +E E +L
Sbjct: 333 GAARSNKEGRDVRELMEQMSFLKDAMARKDEEIERLQL 446
>TC83691 similar to PIR|T00434|T00434 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (22%)
Length = 1056
Score = 68.9 bits (167), Expect = 3e-12
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +1
Query: 315 LPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIES 374
L ++ ++ RNSKLT +LQ +LGG KTLMFV ISP L ETL +L FA RV +E
Sbjct: 310 LAHKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVEL 489
Query: 375 GPARKQVDLTELLKYKQ 391
G AR D TE+ + K+
Sbjct: 490 GTARVNKDNTEVKELKE 540
Score = 34.3 bits (77), Expect = 0.095
Identities = 18/53 (33%), Positives = 30/53 (55%)
Frame = +3
Query: 182 LEVKQAADGTQEVPGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRSH 234
LE++ +++ VP V V ++ G++ R+VGST+ N+ SSRSH
Sbjct: 6 LEIRNSSNNGINVPDASLVPVSTTSDVITLMNLGHKNRAVGSTAMNDRSSRSH 164
>AJ499156 similar to GP|10176794|db kinesin-like protein {Arabidopsis
thaliana}, partial (22%)
Length = 678
Score = 66.2 bits (160), Expect = 2e-11
Identities = 33/65 (50%), Positives = 42/65 (63%)
Frame = +1
Query: 315 LPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIES 374
L + ++ RNSKLT++LQ LGGD KTLMFV I+P E+LCSL FA+RV E
Sbjct: 358 LAKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNIAPDQASSGESLCSLRFASRVNACEI 537
Query: 375 GPARK 379
G R+
Sbjct: 538 GTPRR 552
Score = 27.7 bits (60), Expect = 8.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 211 ILKSGNRVRSVGSTSANELSSRSHW 235
+L RSVG T NE SSRSH+
Sbjct: 13 LLNQAANSRSVGKTQMNEQSSRSHF 87
>TC92104 similar to PIR|D86151|D86151 hypothetical protein AAF76473.1
[imported] - Arabidopsis thaliana, partial (10%)
Length = 462
Score = 65.5 bits (158), Expect = 4e-11
Identities = 37/95 (38%), Positives = 54/95 (55%), Gaps = 2/95 (2%)
Frame = +2
Query: 29 GNIRVFCRCRPLN-ENEIANGSAVSVVNFESNSEELQVVCSDSSKKQFKFDHVFKPEDNQ 87
G +RV R RP N E E+A+ V + + L++ ++ ++FD V +Q
Sbjct: 158 GRVRVAVRLRPRNAEEEMADADFGDCVELQPELKRLKLRRNNWDSDTYEFDEVLTQSASQ 337
Query: 88 EAVF-AQTKPIVASVLDGHNVCIFAYGQTGTGKTF 121
+ V+ KP+V SVLDG+N + AYGQTGTGKTF
Sbjct: 338 KRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTF 442
>CA989870 similar to GP|18201934|g kinesin-like protein heavy chain
{Arabidopsis thaliana}, partial (9%)
Length = 806
Score = 65.1 bits (157), Expect = 5e-11
Identities = 38/80 (47%), Positives = 48/80 (59%), Gaps = 2/80 (2%)
Frame = +2
Query: 325 RNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVDLT 384
RNSKLT +LQ SLGG KTLMFV I+P L ET+ +L FA RV IE G A+ +
Sbjct: 11 RNSKLTQVLQDSLGGHAKTLMFVHINPEINALGETISTLKFAERVASIELGAAKSNKETG 190
Query: 385 ELLKYKQMAE--KSKHDEKE 402
E+ + K+ KS + KE
Sbjct: 191 EIRELKEEISNIKSALERKE 250
>BQ147568
Length = 279
Score = 63.5 bits (153), Expect = 1e-10
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 1 DEYEILKRKYLEVSLERRRLNNEVIELKGNI 31
DEYEILKRKYLEVSLERRRLNNEVIELKGNI
Sbjct: 185 DEYEILKRKYLEVSLERRRLNNEVIELKGNI 277
>BI265352 similar to PIR|F84599|F84 probable kinesin heavy chain [imported] -
Arabidopsis thaliana, partial (22%)
Length = 408
Score = 61.6 bits (148), Expect = 6e-10
Identities = 49/142 (34%), Positives = 71/142 (49%), Gaps = 3/142 (2%)
Frame = +2
Query: 31 IRVFCRCRPLNENEI-ANGSAV-SVVNFESNSEELQVVCSDSSKKQFKFDHVFKPEDNQE 88
I V R RPLNE EI AN SA +N + + + + FD VF+ +
Sbjct: 2 ILVLLRLRPLNEKEISANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCETR 181
Query: 89 AVFAQ-TKPIVASVLDGHNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRVSEER 147
V+ + + I SV+ G N IFAYGQT +GKT+TM G E + + + + EER
Sbjct: 182 QVYEEGAREIALSVVGGINSSIFAYGQTSSGKTYTMVGITEFAVAD---IFDYAKRHEER 352
Query: 148 QGTIKYELLVSMLEVYNEKIKD 169
+K+ S +E+YNE + D
Sbjct: 353 AFALKF----SAIEIYNEIVXD 406
>BE999515 similar to PIR|T07397|T0 kinesin heavy chain-like protein (clone
PKCBP) - potato, partial (13%)
Length = 526
Score = 61.2 bits (147), Expect = 7e-10
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 4/198 (2%)
Frame = +2
Query: 215 GNRVRSVGSTSANELSSRSHWQIFYIIVDDKKMVLHAVWCG*LLWGKI*SMAREQKVTFG 274
G+ R T NE SSRSH +I I+++ + + G K++F
Sbjct: 8 GSERRHTAGTQMNEESSRSH-RILSIVIESVNLQSQSTARG--------------KLSF- 139
Query: 275 *LT*LAVSV*GKLKLKEKG*RN--LSS*ISLYHHLVMLLQPL--LPNQPTYLTDRNSKLT 330
V + G ++K+ G L S+ L L + L + ++ RN KLT
Sbjct: 140 ------VDLAGSERIKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLT 301
Query: 331 HILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVDLTELLKYK 390
++ SLGG+ KTLMFV +SP L ET SL +A+RVR I + P+ K + E+ + K
Sbjct: 302 MLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIVNDPS-KNISSKEIARLK 478
Query: 391 QMAEKSKHDEKEARKLQD 408
++ K E+ RK +D
Sbjct: 479 KIVAYWK--EQAGRKGED 526
>BQ149758 weakly similar to PIR|F84614|F8 probable kinesin heavy chain
[imported] - Arabidopsis thaliana, partial (11%)
Length = 367
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +3
Query: 4 EILKRKYLEVSLERRRLNNEVIELKGNIRVFCRCRPLNENEIANGSAVSVVNFES 58
E LK KY E +R++L NEV E KGNIRVFCRCRPLN+ E++ G +VV+F++
Sbjct: 174 EDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEMSAG-CTTVVDFDA 335
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.326 0.139 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,454,405
Number of Sequences: 36976
Number of extensions: 141544
Number of successful extensions: 960
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of query: 430
length of database: 9,014,727
effective HSP length: 99
effective length of query: 331
effective length of database: 5,354,103
effective search space: 1772208093
effective search space used: 1772208093
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC135319.10