BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135311.5 + phase: 0
(346 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC87637 similar to PIR|T02462|T02462 probable AT-hook DNA-bindin... 397 e-111
BF636643 weakly similar to GP|6633838|gb|A F2K11.15 {Arabidopsis... 239 4e-75
TC82067 similar to GP|4165183|emb|CAA10643.1 SAP1 protein {Antir... 151 3e-37
BG589060 similar to GP|17979485|gb AT4g12080/F16J13_150 {Arabido... 148 3e-36
CB891518 similar to GP|12643044|gb putative AT-Hook DNA-binding ... 144 4e-35
AW776126 similar to GP|12643044|gb| putative AT-Hook DNA-binding... 140 7e-34
TC92473 weakly similar to GP|8809639|dbj|BAA97190.1 contains sim... 124 5e-29
TC91370 similar to GP|8978267|dbj|BAA98158.1 contains similarity... 107 7e-24
TC77972 similar to GP|6175162|gb|AAF04888.1| hypothetical protei... 105 3e-23
TC80273 similar to GP|8978267|dbj|BAA98158.1 contains similarity... 101 4e-22
TC79938 similar to GP|17933299|gb|AAL48232.1 AT4g17800/dl4935c {... 100 6e-22
TC88820 homologue to PIR|D84890|D84890 probable AT-hook DNA-bind... 99 2e-21
TC78237 similar to GP|17933299|gb|AAL48232.1 AT4g17800/dl4935c {... 98 4e-21
AL366947 homologue to PIR|D84890|D84 probable AT-hook DNA-bindin... 92 4e-19
AW560824 similar to PIR|T04576|T04 hypothetical protein T12H17.2... 88 6e-18
TC80656 similar to PIR|T05553|T05553 hypothetical protein F24A6.... 86 2e-17
TC92219 similar to PIR|T01348|T01348 hypothetical protein F6N15.... 86 3e-17
TC91718 similar to GP|6175162|gb|AAF04888.1| hypothetical protei... 85 4e-17
TC82791 similar to GP|8809639|dbj|BAA97190.1 contains similarity... 83 2e-16
TC77953 similar to PIR|D84890|D84890 probable AT-hook DNA-bindin... 82 3e-16
>TC87637 similar to PIR|T02462|T02462 probable AT-hook DNA-binding protein
[imported] - Arabidopsis thaliana, partial (53%)
Length = 1659
Score = 397 bits (1021), Expect = e-111
Identities = 221/350 (63%), Positives = 262/350 (74%), Gaps = 4/350 (1%)
Frame = +1
Query: 1 MDHGDHMA-LSNSASYYMQQRVLPGSGAQPELHVSPSFNQLSNPNLPFQSNIGGGGSNIG 59
MD GD MA LS SASY+MQ R LPGSG Q ELH SP L N N FQS+IGGGG+ IG
Sbjct: 391 MDRGDQMAALSGSASYFMQ-RGLPGSGNQHELHNSPGIRPL-NTNSSFQSSIGGGGT-IG 561
Query: 60 TTLPLESSAISSQGVNMSGHTG--VPSGETVKRKRGRPRKYGADRVVSLALSPSPTPSSN 117
+TLP++SS I SQ +N+ +G +GE KRKRGRPRKYGAD VSLAL+P+ TP+S+
Sbjct: 562 STLPMDSSGIGSQCINVGASSGGAASTGEPAKRKRGRPRKYGADGSVSLALTPT-TPASH 738
Query: 118 PGTMTQGGPKRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTF 177
PGT+ Q KRGRGRPPGSGKKQQLASFG L+S SAG GF PHVI IA GEDIA KIL F
Sbjct: 739 PGTVPQV-QKRGRGRPPGSGKKQQLASFGGLISSSAGNGFTPHVISIAIGEDIATKILAF 915
Query: 178 SQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDG 237
SQ R + V+S++G+VS+V + + S SGG++ YEG F I+S++G Y+ +N SRNR G
Sbjct: 916 SQQGPRTIFVMSANGAVSTVTLCQASTSGGSVTYEGRFEILSLTGSYLVADNDGSRNRTG 1095
Query: 238 GLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFLWGRLKAKNKKKESSEDAE-GTVES 296
LS+SL PDGR+ GG VGG L+AASPVQV+IGSF+WG K KNKK E SED E G E+
Sbjct: 1096SLSVSLASPDGRVIGGGVGGLLIAASPVQVIIGSFMWGGPKTKNKKNEDSEDQEVGVEEN 1275
Query: 297 DHQGAHNPAALNSISPNQNLTPTSSLSPWSAASRQMDMGNSHADIDLMRG 346
H G HNPAA+NS+SPNQNLTPT SL+ W ASR +DM NSH DIDLMRG
Sbjct: 1276HHHGVHNPAAMNSMSPNQNLTPT-SLNSW-PASRPLDMRNSHIDIDLMRG 1419
>BF636643 weakly similar to GP|6633838|gb|A F2K11.15 {Arabidopsis thaliana},
partial (8%)
Length = 486
Score = 239 bits (609), Expect(2) = 4e-75
Identities = 121/124 (97%), Positives = 121/124 (97%)
Frame = +1
Query: 131 GRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSS 190
GRPPGSGKKQQLASFGELMSGSAGTGFIPHVI IASGEDIAAKILTFSQVRA ALCVLSS
Sbjct: 10 GRPPGSGKKQQLASFGELMSGSAGTGFIPHVI*IASGEDIAAKILTFSQVRAXALCVLSS 189
Query: 191 SGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRL 250
SGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCY PTENGSSRNRDGGLSISLLGPDGRL
Sbjct: 190 SGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYXPTENGSSRNRDGGLSISLLGPDGRL 369
Query: 251 FGGA 254
FGGA
Sbjct: 370 FGGA 381
Score = 60.5 bits (145), Expect(2) = 4e-75
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +2
Query: 256 GGPLVAASPVQVMIGSFLWGRLKAKNKKKESSE 288
GGPLVAA PV VMIGSFLWG LKA NKKKESSE
Sbjct: 386 GGPLVAAXPVXVMIGSFLWGTLKAXNKKKESSE 484
>TC82067 similar to GP|4165183|emb|CAA10643.1 SAP1 protein {Antirrhinum
majus}, partial (51%)
Length = 989
Score = 151 bits (382), Expect = 3e-37
Identities = 99/243 (40%), Positives = 131/243 (53%), Gaps = 5/243 (2%)
Frame = +2
Query: 55 GSNIGTTLPLESSAISSQGVNMSGHTGVPSGETVKRKRGRPRKYGADRVVSLAL-----S 109
GS+I + SSA+SSQ E KRKRGRPRKYG A S
Sbjct: 140 GSHILYPHSVASSAVSSQL------------EPAKRKRGRPRKYGTPEQALAAKKASTSS 283
Query: 110 PSPTPSSNPGTMTQGGPKRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGED 169
SPTP P T K P S S L G+AG GF HVI +A+GED
Sbjct: 284 FSPTP---PTLDTTTNNKNTHSFSPSSSSFTTKKSHS-LSLGNAGQGFSAHVIAVAAGED 451
Query: 170 IAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTEN 229
+ KI+ F Q +C++S+SGS+S+ +R+P+ SGG + YEG F I+S++G YV E
Sbjct: 452 VGQKIMQFMQQHRGEICIMSASGSISNASLRQPASSGGNIMYEGRFDIISLTGSYVRNE- 628
Query: 230 GSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFLWGRLKAKNKKKESSED 289
+R R GGLS+ L DG++ GG VGGPL AA PVQV++G+F + KK++S
Sbjct: 629 --TRRRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFF------IDNKKDTSAG 784
Query: 290 AEG 292
+G
Sbjct: 785 GKG 793
>BG589060 similar to GP|17979485|gb AT4g12080/F16J13_150 {Arabidopsis
thaliana}, partial (37%)
Length = 712
Score = 148 bits (374), Expect = 3e-36
Identities = 72/146 (49%), Positives = 105/146 (71%), Gaps = 4/146 (2%)
Frame = +1
Query: 142 LASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIRE 201
+ + GE + S G+ F PH+I + +GED+ K+++FSQ RA+C+LS++G + SV +R+
Sbjct: 22 VGNIGEWVPCSVGSNFTPHIITVNAGEDVTMKVISFSQQGPRAVCILSANGVIKSVTLRQ 201
Query: 202 PSISGGTLKYEGHFHIMSMSGCYVPTEN-GSSRNRDGGLSISLLGPDGRLFGGAVGGPLV 260
P SGGTL YEG F I+S+SG ++P E+ G +R+R GG+S+SL PDGR+ GG V G LV
Sbjct: 202 PDSSGGTLTYEGLFEILSLSGSFMPNESGGGTRSRSGGMSVSLASPDGRVVGGGVAGLLV 381
Query: 261 AASPVQVMIGSFLWG---RLKAKNKK 283
AASPVQV++GSF+ G K +N+K
Sbjct: 382 AASPVQVVVGSFMAGNQHEQKPRNQK 459
>CB891518 similar to GP|12643044|gb putative AT-Hook DNA-binding protein
{Oryza sativa}, partial (27%)
Length = 691
Score = 144 bits (364), Expect = 4e-35
Identities = 93/237 (39%), Positives = 130/237 (54%), Gaps = 9/237 (3%)
Frame = +1
Query: 28 QPELHVSPSFNQLSNPNLPFQSNIGGGGSNIGTTLPLESSAISSQGVNMS-GHTGVPSGE 86
QP + V P+ +N + ++ +NI S Q S H G S
Sbjct: 1 QPTMMVGPTSYAPTNTTMISPNSSTTTTANIMAPATARFPFASPQSEPFSVTHDGPSSPS 180
Query: 87 TV-KRKRGRPRKYGADRVVSLALSPSPTPSSNPGTMTQGG-------PKRGRGRPPGSGK 138
T+ K+KRGRPRKY D ++L L+P +P + + G PK+ RGRPPGSGK
Sbjct: 181 TLGKKKRGRPRKYSPDGNIALGLAPVSSPVAATSAASAGDSGNADAPPKKHRGRPPGSGK 360
Query: 139 KQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVI 198
KQ A G+ GTGF PHVI + SGEDI K++ FSQ R +C+LS+ G++SSVI
Sbjct: 361 KQLDAL------GAGGTGFTPHVILVESGEDITEKVMAFSQTGPRTVCILSAIGAISSVI 522
Query: 199 IREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAV 255
+R+P+ SG +YEG F I+S+SG +P ++ L +S+ G DGR+ GGAV
Sbjct: 523 LRQPA-SGSIARYEGQFEIVSLSG-PMPLSEIMVTKQNSSLYVSVAGADGRVLGGAV 687
>AW776126 similar to GP|12643044|gb| putative AT-Hook DNA-binding protein
{Oryza sativa}, partial (19%)
Length = 742
Score = 140 bits (353), Expect = 7e-34
Identities = 82/220 (37%), Positives = 126/220 (57%), Gaps = 10/220 (4%)
Frame = +2
Query: 45 LPFQSNIG-GGGSNIGTTLPLESSAISSQGVNMSGHTGVPSGETVKRKRGRPRKYGADRV 103
LP + N+ G++I TT+ A+ + V + T K+KRGRPRKY AD
Sbjct: 83 LPQEMNMNISVGNSIVTTIGTSIVALEAPTVTPTTTTPGSLDLFGKKKRGRPRKYDADGN 262
Query: 104 VS-----LALSPSPTPSSNPG---TMTQGGPKRGRGRPPGSGKKQQLASFGELMSGSAGT 155
++ + + +P +S PG + + K+GRG+ G Q +SFGE+ +A
Sbjct: 263 LNPSYKKIVKTTTPILTSPPGFTLSTNEFASKKGRGKSTGFVNYQTFSSFGEVFPSTAAV 442
Query: 156 GFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGT-LKYEGH 214
F PHV+ + +GED+ KIL+F+Q R +C+LS++G++S V + +P +GG+ L YEG
Sbjct: 443 DFAPHVVTVYAGEDVGGKILSFAQKSPRGICILSANGAISKVALGQPGSTGGSILTYEGR 622
Query: 215 FHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGA 254
F I+S+SG Y +N R +GGLS+SL GPDG + GA
Sbjct: 623 FEILSLSGSYTAFDNSGIRTPEGGLSVSLAGPDGPINRGA 742
>TC92473 weakly similar to GP|8809639|dbj|BAA97190.1 contains similarity to
DNA-binding protein~gene_id:MMI9.9 {Arabidopsis
thaliana}, partial (28%)
Length = 890
Score = 124 bits (311), Expect = 5e-29
Identities = 59/131 (45%), Positives = 91/131 (69%)
Frame = +2
Query: 157 FIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFH 216
F HV+ + SGED++ KI++ SQ + +LS++G++S+V +R+ GGT YEG F
Sbjct: 14 FQTHVLTVNSGEDVSMKIMSLSQQEYHTISILSATGTISNVTLRQSDACGGTSTYEGVFE 193
Query: 217 IMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFLWGR 276
I+S+SG +VPTENG +++R G +S+SL GP+GR+FGGA+ G LVAA VQV++ SF +
Sbjct: 194 ILSLSGSFVPTENGLTKSRSGRMSVSLAGPNGRVFGGALAGLLVAAGSVQVVVASFFPEK 373
Query: 277 LKAKNKKKESS 287
K ++ + S
Sbjct: 374 ENPKRQRVDHS 406
>TC91370 similar to GP|8978267|dbj|BAA98158.1 contains similarity to AT-hook
DNA-binding protein~gene_id:K2I5.6 {Arabidopsis
thaliana}, partial (49%)
Length = 925
Score = 107 bits (267), Expect = 7e-24
Identities = 68/166 (40%), Positives = 97/166 (57%), Gaps = 3/166 (1%)
Frame = +3
Query: 110 PSPT-PSSNPGTMTQGGPKRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGE 168
PSP PS N G + G +R RGRPPGS K + S +++ S+ PH++EI G
Sbjct: 132 PSPNKPSCNDGATIEIG-RRPRGRPPGSKNKPKAQS-QIIINHSSDPAMSPHILEIPEGS 305
Query: 169 DIAAKILTFSQVRARALCVLSSSGSVSSVIIREPS-ISGGTLKYEGHFHIMSMSGCYV-P 226
D+ I FS R LCVL+ SG+V++V +R+PS G T+ + G F+I+S+S + P
Sbjct: 306 DVVEAISRFSNRRKTGLCVLTGSGTVANVTLRQPSGPPGTTVTFHGRFNILSISATFFSP 485
Query: 227 TENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSF 272
E+ N++ SISL P G++ GG V GPL+AA V V+ SF
Sbjct: 486 LESSPPMNKE--FSISLAAPQGQIVGGFVVGPLLAAGTVFVIAASF 617
>TC77972 similar to GP|6175162|gb|AAF04888.1| hypothetical protein
{Arabidopsis thaliana}, partial (46%)
Length = 1589
Score = 105 bits (261), Expect = 3e-23
Identities = 82/265 (30%), Positives = 123/265 (45%), Gaps = 1/265 (0%)
Frame = +2
Query: 37 FNQLSNPNLPFQSNIG-GGGSNIGTTLPLESSAISSQGVNMSGHTGVPSGETVKRKRGRP 95
FN N + +G GG N T+ PL + +N S TGV + +
Sbjct: 320 FNSTLMANRWWTGPVGLGGMDNSVTSSPLGKPDLGFS-MNQSAVTGVNNMNNNNNEEEED 496
Query: 96 RKYGADRVVSLALSPSPTPSSNPGTMTQGGPKRGRGRPPGSGKKQQLASFGELMSGSAGT 155
K +D A+ T +R RGRP GS K + F ++ +
Sbjct: 497 EKENSDEHKGGAIE------------TNTSTRRPRGRPSGSKNKPKPPIF---ITRDSPN 631
Query: 156 GFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHF 215
HV+E+A+G DI+ I+ F++ R R +C+LS+SG+V +V +R+P+ G + G F
Sbjct: 632 ALRSHVMEVATGTDISDSIVQFARKRQRGICILSASGTVVNVSLRQPTGPGAVVALPGRF 811
Query: 216 HIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFLWG 275
I+S++G +P G S GL+I L G G++ GG V GPLVAA PV +M +F
Sbjct: 812 DILSLTGSVLP---GPSPPGATGLTIYLSGGQGQVVGGGVVGPLVAAGPVMLMAATF--- 973
Query: 276 RLKAKNKKKESSEDAEGTVESDHQG 300
N E +G + HQG
Sbjct: 974 ----SNATYERLPVEDGDDQEGHQG 1036
>TC80273 similar to GP|8978267|dbj|BAA98158.1 contains similarity to AT-hook
DNA-binding protein~gene_id:K2I5.6 {Arabidopsis
thaliana}, partial (53%)
Length = 1418
Score = 101 bits (252), Expect = 4e-22
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 5/176 (2%)
Frame = +3
Query: 102 RVVSLALSPSPTPSSNPGTMTQGGP----KRGRGRPPGSGKKQQLASFGELMSGSAGTGF 157
++++ S + P T G +R RGRPPGS K + +++ T
Sbjct: 324 KMITTTTSGGVATTQKPNTSGDGATIEVSRRPRGRPPGSKNKPKPPI---IITRDPETVM 494
Query: 158 IPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGT-LKYEGHFH 216
P +++I+ G D+ I FS+ + LCVL+ SG+V++V +R+PS + GT + + G F
Sbjct: 495 SPFILDISGGNDVVEAISEFSRRKNIGLCVLTGSGTVANVTLRQPSTTPGTTVTFHGRFD 674
Query: 217 IMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSF 272
I+S++ +VP ++G S SISL GP G++ GG V G L+AA V V+ SF
Sbjct: 675 ILSITATFVPQQHGVSPAIPSNFSISLAGPQGQIVGGIVAGNLIAAGTVFVIASSF 842
>TC79938 similar to GP|17933299|gb|AAL48232.1 AT4g17800/dl4935c {Arabidopsis
thaliana}, partial (63%)
Length = 1259
Score = 100 bits (250), Expect = 6e-22
Identities = 61/172 (35%), Positives = 93/172 (53%)
Frame = +2
Query: 101 DRVVSLALSPSPTPSSNPGTMTQGGPKRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPH 160
DR L L + P G +R RGRPPGS K A +++ + H
Sbjct: 161 DRSQGLELGSAAGPGDVVG-------RRPRGRPPGSKNK---AKPPVIITRESANTLRAH 310
Query: 161 VIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSM 220
++E+A G D+ + T+++ R R +CVLS SG+V++V IR+P+ +GG + G F I+S+
Sbjct: 311 ILEVAGGSDVFECVSTYARRRQRGICVLSGSGTVTNVSIRQPAAAGGVVTLHGRFEILSL 490
Query: 221 SGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSF 272
SG ++P L+I L G G++ GG+V G L+AA PV V+ SF
Sbjct: 491 SGSFLPPPAPPGAT---SLTIYLAGGQGQVVGGSVVGELIAAGPVIVIAASF 637
>TC88820 homologue to PIR|D84890|D84890 probable AT-hook DNA-binding protein
[imported] - Arabidopsis thaliana, partial (58%)
Length = 1544
Score = 99.0 bits (245), Expect = 2e-21
Identities = 53/146 (36%), Positives = 87/146 (59%)
Frame = +3
Query: 127 KRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALC 186
+R RGRP GS K + +++ + HV+E+A+G DI + F++ R R +C
Sbjct: 750 RRPRGRPAGSKNKPKPPI---IITRDSANALRSHVMEVANGCDIMESVTVFARRRQRGVC 920
Query: 187 VLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGP 246
+LS SG+V++V +R+P+ G + G F I+S+SG ++P + + GL+I L G
Sbjct: 921 ILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAAS---GLAIYLAGG 1091
Query: 247 DGRLFGGAVGGPLVAASPVQVMIGSF 272
G++ GG+V GPL+A+ PV +M SF
Sbjct: 1092QGQVVGGSVVGPLLASGPVVIMAASF 1169
>TC78237 similar to GP|17933299|gb|AAL48232.1 AT4g17800/dl4935c {Arabidopsis
thaliana}, partial (59%)
Length = 1166
Score = 98.2 bits (243), Expect = 4e-21
Identities = 53/146 (36%), Positives = 86/146 (58%)
Frame = +3
Query: 127 KRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALC 186
+R RGRPPGS K + +++ + H++E++SG D+ + T+++ R R +C
Sbjct: 264 RRPRGRPPGSKNKPKPPV---IITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGIC 434
Query: 187 VLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGP 246
VLS SG+V++V +R+P+ +G + G F I+S+SG ++P LS+ L G
Sbjct: 435 VLSGSGTVTNVTLRQPAAAGSVVTLHGRFEILSLSGSFLPPPAPPGAT---SLSVFLGGG 605
Query: 247 DGRLFGGAVGGPLVAASPVQVMIGSF 272
G++ GG V GPLVA+ PV V+ SF
Sbjct: 606 QGQVVGGNVVGPLVASGPVIVIASSF 683
>AL366947 homologue to PIR|D84890|D84 probable AT-hook DNA-binding protein
[imported] - Arabidopsis thaliana, partial (43%)
Length = 488
Score = 91.7 bits (226), Expect = 4e-19
Identities = 45/113 (39%), Positives = 73/113 (63%)
Frame = +1
Query: 160 HVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMS 219
HV+E+A+G DI + F++ R R +C+LS SG+V++V +R+P+ G + G F I+S
Sbjct: 100 HVMEVANGCDIMESVTVFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILS 279
Query: 220 MSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSF 272
+SG ++P + + GL+I L G G++ GG+V GPL+A+ PV +M SF
Sbjct: 280 LSGSFLPPPAPPAAS---GLAIYLAGGQGQVVGGSVVGPLLASGPVVIMAASF 429
>AW560824 similar to PIR|T04576|T04 hypothetical protein T12H17.200 -
Arabidopsis thaliana, partial (38%)
Length = 531
Score = 87.8 bits (216), Expect = 6e-18
Identities = 47/156 (30%), Positives = 87/156 (55%)
Frame = +2
Query: 160 HVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMS 219
HV+E+A G D+ + F++ R R +C++S +G+V++V +R+P+ G + G F I+S
Sbjct: 41 HVMEVADGCDVVESVNNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILS 220
Query: 220 MSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFLWGRLKA 279
++G ++P + + GL+I L G G++ GG+V G L+A+ PV +M SF
Sbjct: 221 LAGSFLPPPAPPAAS---GLTIYLAGGQGQVVGGSVDGALIASGPVVIMSASFSDNNNNT 391
Query: 280 KNKKKESSEDAEGTVESDHQGAHNPAALNSISPNQN 315
N SS + + ++ + G+ + LN + +N
Sbjct: 392 INSTLYSSSN-KPQIKMNKSGSSSGGGLNLTNREEN 496
>TC80656 similar to PIR|T05553|T05553 hypothetical protein F24A6.160 -
Arabidopsis thaliana, partial (24%)
Length = 928
Score = 85.9 bits (211), Expect = 2e-17
Identities = 54/137 (39%), Positives = 77/137 (55%), Gaps = 17/137 (12%)
Frame = +1
Query: 88 VKRKRGRPRKYGADRVVS----LALSPSPTPSSNPGTMTQGGPKRGRGRPPGSGKKQQL- 142
+K+KRGRPRKYG D + ALSP P SS P T KRGRG+P S KK
Sbjct: 520 LKKKRGRPRKYGPDGKPAPGAVTALSPMPISSSIPLTGEFSAWKRGRGKPVESMKKSSFK 699
Query: 143 ------------ASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSS 190
E ++ S G F +V+ + SGED+ KI++ SQ +RA+C+LS+
Sbjct: 700 FDFESPPVQVVGGGVSEGIAYSVGANFTAYVLTVNSGEDVTMKIMS-SQQGSRAICILSA 876
Query: 191 SGSVSSVIIREPSISGG 207
+G++S+V +R+ + SGG
Sbjct: 877 TGTISNVTLRQSTSSGG 927
>TC92219 similar to PIR|T01348|T01348 hypothetical protein F6N15.24 -
Arabidopsis thaliana, partial (18%)
Length = 653
Score = 85.5 bits (210), Expect = 3e-17
Identities = 45/101 (44%), Positives = 64/101 (62%)
Frame = +1
Query: 215 FHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFLW 274
F I+S+SG ++PT+N +R+R GG+S+SL PDGR+ GG V G LVAA+PVQV++GSFL
Sbjct: 1 FEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAATPVQVVVGSFLP 180
Query: 275 GRLKAKNKKKESSEDAEGTVESDHQGAHNPAALNSISPNQN 315
+ + KK S+ A T+ P A+ S P+ N
Sbjct: 181 SNQQDQKIKKPKSDYASPTIT-------EPIAVYSAPPSTN 282
>TC91718 similar to GP|6175162|gb|AAF04888.1| hypothetical protein
{Arabidopsis thaliana}, partial (41%)
Length = 449
Score = 85.1 bits (209), Expect = 4e-17
Identities = 46/128 (35%), Positives = 75/128 (57%)
Frame = +3
Query: 125 GPKRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARA 184
G +R RGRPPGS K + F ++ + HV+E++SG D+A + F++ R R
Sbjct: 84 GNRRPRGRPPGSKNKPKPPIF---VTRDSPNSLKSHVMEVSSGADVAESVAQFARRRQRG 254
Query: 185 LCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLL 244
+CVLS SGSV++V +R+P+ G + G F I+S++G ++P G + GL++ L
Sbjct: 255 VCVLSGSGSVANVTLRQPAAPGAVVAPHGRFDILSLTGAFLP---GPAPPGATGLTVYLA 425
Query: 245 GPDGRLFG 252
G G++ G
Sbjct: 426 GGQGQVVG 449
>TC82791 similar to GP|8809639|dbj|BAA97190.1 contains similarity to
DNA-binding protein~gene_id:MMI9.9 {Arabidopsis
thaliana}, partial (17%)
Length = 765
Score = 82.8 bits (203), Expect = 2e-16
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +1
Query: 222 GCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFLWGRLKAKN 281
G ++PTENG +R+R GG+S+SL GPDGR+ GG + G L+A+ PVQV++GSFL G N
Sbjct: 31 GSFMPTENGITRSRSGGMSVSLAGPDGRVLGGGLAGLLIASGPVQVVVGSFLPGHHLEHN 210
Query: 282 KKKESSEDAEGTVESDHQGAH-NPAALNSIS 311
KK+ E T+ ++ H N N +S
Sbjct: 211 SKKQRVEHTISTITHNNPPPHVNHHVSNEVS 303
>TC77953 similar to PIR|D84890|D84890 probable AT-hook DNA-binding protein
[imported] - Arabidopsis thaliana, partial (57%)
Length = 1695
Score = 82.0 bits (201), Expect = 3e-16
Identities = 43/136 (31%), Positives = 79/136 (57%), Gaps = 3/136 (2%)
Frame = +1
Query: 160 HVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMS 219
HV+E+A G D+ + F++ R R +C++S +G+V++V +R+P+ G + G F I+S
Sbjct: 799 HVMEVADGCDVVESVNNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILS 978
Query: 220 MSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSF---LWGR 276
++G ++P + + GL+I L G ++ GG+V G L+A+ PV +M SF + R
Sbjct: 979 LAGSFLPPPAPPAAS---GLTIYLAGGQRQVVGGSVVGALIASGPVVIMSASFSNAAYER 1149
Query: 277 LKAKNKKKESSEDAEG 292
L ++ S + +G
Sbjct: 1150LPLEDDDGSSIQQLQG 1197
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.311 0.130 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,746,540
Number of Sequences: 36976
Number of extensions: 135006
Number of successful extensions: 978
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of query: 346
length of database: 9,014,727
effective HSP length: 97
effective length of query: 249
effective length of database: 5,428,055
effective search space: 1351585695
effective search space used: 1351585695
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Medicago: description of AC135311.5