TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135311.3 - phase: 1 /pseudo
         (84 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC85400 sucrose synthase                                              132  3e-32
TC85401 homologue to GP|13160142|emb|CAC32462. sucrose synthase ...   110  1e-25
TC82744 homologue to EGAD|142043|151512 second sucrose synthase ...    98  5e-22
AW256569 similar to GP|10177426|dbj GATA-binding transcription f...    26  3.1
TC76596 homologue to SP|P33278|SUI1_ORYSA Protein translation fa...    25  5.3
TC86794 similar to PIR|T06499|T06499 Rieske [2Fe-2S] iron-sulfur...    25  5.3
BG646574 weakly similar to GP|6520167|dbj| ZW18 {Arabidopsis tha...    24  9.1

>TC85400 sucrose synthase
          Length = 3133

 Score =  132 bits (331), Expect = 3e-32
 Identities = 69/80 (86%), Positives = 70/80 (87%), Gaps = 5/80 (6%)
 Frame = +2

Query: 1   IVLPPWVALAVRLMPGI*EYLRVNVHALVVENLQPAEFLKFKEELVDGSANVNYVLELDF 60
           IVLPPWVALAVR  PGI EYLRVNVHALVVENLQPAEFLKFKEELVDGSAN N+VLELDF
Sbjct: 548 IVLPPWVALAVRPRPGIWEYLRVNVHALVVENLQPAEFLKFKEELVDGSANGNFVLELDF 727

Query: 61  EPFTASFPRP-----IGGGV 75
           EPFTASFPRP     IG GV
Sbjct: 728 EPFTASFPRPTLNKSIGNGV 787


>TC85401 homologue to GP|13160142|emb|CAC32462. sucrose synthase isoform 3
           {Pisum sativum}, complete
          Length = 2846

 Score =  110 bits (275), Expect = 1e-25
 Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 5/80 (6%)
 Frame = +2

Query: 1   IVLPPWVALAVRLMPGI*EYLRVNVHALVVENLQPAEFLKFKEELVDGSANVNYVLELDF 60
           +VLPP+VALAVR  PG+ EYLRV+VH+LVV+ L+ AE+LKFKEELV+GS+N N+VLELDF
Sbjct: 368 VVLPPFVALAVRPRPGVWEYLRVDVHSLVVDELRAAEYLKFKEELVEGSSNGNFVLELDF 547

Query: 61  EPFTASFPRP-----IGGGV 75
           EPF ASFPRP     IG GV
Sbjct: 548 EPFNASFPRPTLNKSIGNGV 607


>TC82744 homologue to EGAD|142043|151512 second sucrose synthase {Pisum
           sativum}, partial (19%)
          Length = 676

 Score = 98.2 bits (243), Expect = 5e-22
 Identities = 52/80 (65%), Positives = 59/80 (73%), Gaps = 5/80 (6%)
 Frame = +3

Query: 1   IVLPPWVALAVRLMPGI*EYLRVNVHALVVENLQPAEFLKFKEELVDGSANVNYVLELDF 60
           IVLPP+VA+AVR  PG+ EY+RVNV  L VE L  +E+L FKEELVDG  N N+VLELD 
Sbjct: 432 IVLPPFVAIAVRPRPGVWEYVRVNVFELNVEQLSISEYLSFKEELVDGKINENFVLELDL 611

Query: 61  EPFTASFPRP-----IGGGV 75
           EPF ASFPRP     IG GV
Sbjct: 612 EPFNASFPRPTRSSSIGNGV 671


>AW256569 similar to GP|10177426|dbj GATA-binding transcription factor-like
           protein {Arabidopsis thaliana}, partial (20%)
          Length = 613

 Score = 25.8 bits (55), Expect = 3.1
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 62  PFTASFPRPIGG 73
           PF+ASFP+P GG
Sbjct: 305 PFSASFPKPYGG 340


>TC76596 homologue to SP|P33278|SUI1_ORYSA Protein translation factor SUI1
            homolog (GOS2 protein). [Rice] {Oryza sativa}, partial
            (74%)
          Length = 1573

 Score = 25.0 bits (53), Expect = 5.3
 Identities = 12/37 (32%), Positives = 20/37 (53%)
 Frame = +2

Query: 13   LMPGI*EYLRVNVHALVVENLQPAEFLKFKEELVDGS 49
            + P   E++R  +  +  EN++  E LK  EEL+  S
Sbjct: 1121 ISPSEYEHMRTAISKMSAENMELKERLKTNEELIRAS 1231


>TC86794 similar to PIR|T06499|T06499 Rieske [2Fe-2S] iron-sulfur protein
           tic55 - garden pea, partial (11%)
          Length = 812

 Score = 25.0 bits (53), Expect = 5.3
 Identities = 12/37 (32%), Positives = 20/37 (53%)
 Frame = -2

Query: 13  LMPGI*EYLRVNVHALVVENLQPAEFLKFKEELVDGS 49
           + P   E++R  +  +  EN++  E LK  EEL+  S
Sbjct: 382 ISPSEYEHMRTAISKMSAENMELKERLKTNEELIRAS 272


>BG646574 weakly similar to GP|6520167|dbj| ZW18 {Arabidopsis thaliana},
           partial (10%)
          Length = 754

 Score = 24.3 bits (51), Expect = 9.1
 Identities = 9/35 (25%), Positives = 20/35 (56%)
 Frame = +3

Query: 30  VENLQPAEFLKFKEELVDGSANVNYVLELDFEPFT 64
           V+++   + L+  +   D + N+NY+ E   +PF+
Sbjct: 324 VQSIDGEQSLQLPDREEDATHNINYLTEESVQPFS 428


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.327    0.148    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,042,177
Number of Sequences: 36976
Number of extensions: 17537
Number of successful extensions: 89
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of query: 84
length of database: 9,014,727
effective HSP length: 60
effective length of query: 24
effective length of database: 6,796,167
effective search space: 163108008
effective search space used: 163108008
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)